##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545305_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2387364 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31607748127223 31.0 31.0 33.0 30.0 34.0 2 31.63338309533025 31.0 31.0 34.0 30.0 34.0 3 31.73350314405344 31.0 31.0 34.0 30.0 34.0 4 30.327295711923277 35.0 33.0 37.0 0.0 37.0 5 32.90448461147944 35.0 33.0 37.0 19.0 37.0 6 34.54361128005616 35.0 33.0 37.0 30.0 37.0 7 35.519182663389415 36.0 35.0 37.0 33.0 37.0 8 35.68989437722944 37.0 35.0 37.0 35.0 37.0 9 37.70604063728866 39.0 37.0 39.0 35.0 39.0 10 37.185478628311394 39.0 37.0 39.0 33.0 39.0 11 36.75894208005147 39.0 35.0 39.0 32.0 39.0 12 35.63534551078093 37.0 35.0 39.0 31.0 39.0 13 35.187219879331344 37.0 35.0 39.0 30.0 39.0 14 36.02701347595088 38.0 35.0 40.0 30.0 41.0 15 36.34567749199535 38.0 35.0 40.0 31.0 41.0 16 36.52827428075484 38.0 35.0 40.0 32.0 41.0 17 36.45713808200174 37.0 35.0 40.0 32.0 41.0 18 36.446403229670885 37.0 35.0 40.0 31.0 41.0 19 36.423622874433896 37.0 35.0 40.0 31.0 41.0 20 36.31637320492393 37.0 35.0 40.0 31.0 41.0 21 36.1508454513011 37.0 34.0 40.0 31.0 41.0 22 36.03846376170538 37.0 34.0 40.0 30.0 41.0 23 35.974837938412406 36.0 34.0 40.0 30.0 41.0 24 35.906058313688234 36.0 34.0 40.0 30.0 41.0 25 35.77762670459972 36.0 34.0 40.0 30.0 41.0 26 35.63644463098212 36.0 34.0 40.0 30.0 41.0 27 35.636620138361806 36.0 34.0 40.0 30.0 41.0 28 35.674046772926125 36.0 34.0 40.0 30.0 41.0 29 35.73087388433435 36.0 34.0 40.0 30.0 41.0 30 35.68440254607174 36.0 34.0 40.0 30.0 41.0 31 35.582651409671925 36.0 34.0 40.0 30.0 41.0 32 35.46882712481214 36.0 34.0 40.0 30.0 41.0 33 35.326937576339425 36.0 34.0 40.0 29.0 41.0 34 35.24868474183241 36.0 34.0 40.0 29.0 41.0 35 35.13340613329178 36.0 34.0 40.0 29.0 41.0 36 34.95551243966148 35.0 34.0 40.0 27.0 41.0 37 34.91378817809098 35.0 33.0 40.0 27.0 41.0 38 34.90727220482507 35.0 33.0 40.0 28.0 41.0 39 34.849945379087565 35.0 34.0 40.0 27.0 41.0 40 34.72686821113161 35.0 33.0 40.0 27.0 41.0 41 34.704478663496644 35.0 34.0 40.0 27.0 41.0 42 34.663738751191694 35.0 33.0 40.0 27.0 41.0 43 34.595803153603725 35.0 33.0 40.0 27.0 41.0 44 34.53405555248383 35.0 33.0 40.0 27.0 41.0 45 34.415334234745934 35.0 33.0 39.0 27.0 41.0 46 34.35317613903871 35.0 33.0 39.0 27.0 41.0 47 34.28823673306626 35.0 33.0 39.0 27.0 41.0 48 34.21530859977783 35.0 33.0 39.0 26.0 41.0 49 34.19300324542047 35.0 33.0 39.0 26.0 41.0 50 34.03154190144444 35.0 33.0 39.0 26.0 40.0 51 33.95661700519904 35.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 6.0 13 4.0 14 15.0 15 45.0 16 130.0 17 393.0 18 878.0 19 1835.0 20 3114.0 21 5359.0 22 8408.0 23 12370.0 24 17744.0 25 24360.0 26 31896.0 27 39515.0 28 48109.0 29 59003.0 30 73755.0 31 93126.0 32 120262.0 33 176589.0 34 269241.0 35 367916.0 36 177181.0 37 219367.0 38 284977.0 39 351520.0 40 242.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.757955636425784 26.20945109333977 30.33844022109741 11.694153049137041 2 27.889002263584437 27.299314222715932 31.511114350388127 13.3005691633115 3 29.647971570317722 25.835147049214115 30.92205461756146 13.594826762906703 4 23.527622934751466 38.33060228771147 25.55638771465097 12.585387062886094 5 23.841022986021404 33.58444711405551 28.01952278747606 14.555007112447033 6 22.17965086178731 42.03481329198229 24.875385571701674 10.910150274528727 7 89.48505548378881 4.6338974701805 4.217036028020863 1.6640110180098218 8 91.1578628143844 3.305528608121761 3.6655491160962463 1.8710594613975915 9 87.24928414770433 5.072665919398968 4.863858213494046 2.814191719402655 10 59.294351426929445 21.577061562459683 9.284172836651637 9.84441417395923 11 52.33043641438842 19.694022361064338 15.208405588758145 12.767135635789096 12 46.94424478211115 20.97618963844642 18.304079310905248 13.775486268537183 13 22.669689247219946 41.68631176477488 18.960661214628352 16.68333777337683 14 15.006383609705098 43.164301715197176 24.54263363274306 17.286681042354665 15 15.512967440239528 22.887209491305054 46.8897495312822 14.71007353717322 16 17.799045306874024 17.70572061905935 44.77867639790162 19.71655767616501 17 17.552581005661473 19.682545267500053 25.801092753346367 36.963780973492106 18 23.545885755167625 24.7537451348014 29.960617651937447 21.73975145809353 19 33.17277968504174 25.30581846756506 20.400156825687244 21.12124502170595 20 36.87439368273962 22.957747540802323 21.35870357431879 18.809155202139262 21 25.32077219896086 29.32116761415519 23.21489307872616 22.143167108157787 22 25.182586316958787 25.608495394920926 21.80576568968955 27.403152598430736 23 23.667568079270694 30.341079114873143 22.409192733072963 23.582160072783203 24 23.792768928408066 22.70822547378615 34.88944291695778 18.609562680848 25 19.895164708858808 25.004481930698464 32.428234655461004 22.672118704981727 26 18.979091583855666 36.95100537664135 23.005457064779396 21.064445974723586 27 20.648464163822524 33.556508349795 26.719260238488978 19.075767247893495 28 17.15502956398773 29.493240243213855 36.20151765713147 17.150212535666952 29 18.133556508349795 25.71706702455093 34.33213368384544 21.817242783253832 30 20.858319049797185 30.976675529998776 27.609656508182244 20.555348912021795 31 31.638116349245443 26.82016651000853 20.38415591422171 21.15756122652432 32 34.09932461074223 26.831601716370024 21.33600071040696 17.733072962480794 33 30.04874832660625 28.28961147106181 21.99346224538864 19.668177956943307 34 20.38172645645993 28.060488471804046 26.462617346998613 25.09516772473741 35 23.17941461796358 24.3032901560047 28.40463372992137 24.112661496110356 36 31.365053674261656 25.71099338014647 22.936301292974175 19.9876516526177 37 22.508632952494885 32.288415172550145 26.12035701300681 19.082594861948156 38 22.22049088450693 32.892051651947504 21.11140152905045 23.776055934495115 39 23.88395736888049 29.860632898879263 24.83626292429642 21.41914680794382 40 26.428186066305763 24.586824631685825 23.668866582557165 25.316122719451243 41 18.187255902325745 24.872202144289684 25.887296616686857 31.053245336697717 42 23.140124421747167 26.83013566427239 21.874544476669666 28.155195437310777 43 23.676992699898296 26.532233878034518 23.127265050490834 26.66350837157635 44 21.52729956554593 30.207542712380686 25.815501951105908 22.449655770967478 45 19.467663917190674 35.650826602059844 20.35651036038074 24.52499912036874 46 22.09885044760665 33.035138336675935 23.158429129366112 21.70758208635131 47 22.78910966237239 26.27190491269869 26.283005021437873 24.655980403491046 48 24.56462441420747 21.438414921226926 30.118071647222628 23.878889017342978 49 21.40779537598791 23.684993155631066 30.529362091411283 24.377849376969746 50 19.117696337885633 32.982611784378086 24.68953205292532 23.210159824810965 51 18.23391824623308 33.63039737551542 22.695617425746555 25.440066952504935 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 482.0 1 883.0 2 1284.0 3 3442.0 4 5600.0 5 4213.5 6 2827.0 7 3036.5 8 3246.0 9 3541.5 10 3837.0 11 3937.5 12 4038.0 13 4117.5 14 4197.0 15 4041.5 16 3886.0 17 3579.5 18 3273.0 19 3416.0 20 3559.0 21 3933.0 22 4307.0 23 4894.0 24 5481.0 25 7236.0 26 11760.0 27 14529.0 28 19906.5 29 25284.0 30 28129.5 31 30975.0 32 36473.5 33 41972.0 34 45815.0 35 49658.0 36 52074.0 37 54490.0 38 74114.0 39 93738.0 40 130245.5 41 166753.0 42 202191.5 43 237630.0 44 236377.0 45 235124.0 46 218516.0 47 201908.0 48 194462.0 49 187016.0 50 173163.0 51 159310.0 52 149297.0 53 139284.0 54 125094.0 55 110904.0 56 111738.5 57 112573.0 58 118469.0 59 124365.0 60 117701.5 61 111038.0 62 96879.0 63 82720.0 64 67117.0 65 51514.0 66 43240.0 67 34966.0 68 30733.0 69 26500.0 70 21940.0 71 17380.0 72 13711.5 73 10043.0 74 8163.0 75 4852.5 76 3422.0 77 2657.5 78 1893.0 79 1245.0 80 597.0 81 474.0 82 351.0 83 212.0 84 73.0 85 54.0 86 35.0 87 28.0 88 21.0 89 13.5 90 6.0 91 3.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2387364.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.457232488572464 #Duplication Level Percentage of deduplicated Percentage of total 1 78.48922429526881 12.132261877796802 2 9.044982707103696 2.796208011176388 3 3.0836017881361797 1.429918492241961 4 1.4582199330822647 0.9016017810049259 5 0.8041900459543101 0.6215276252655773 6 0.49884586682679055 0.46264659237030953 7 0.3434484298278235 0.3716133559378683 8 0.2728344379113636 0.33738122701479484 9 0.18746890012100298 0.2607975336192583 >10 2.4459366288669226 9.355596764563865 >50 1.341287539004641 15.234524105823969 >100 2.012816497375228 53.6989753216039 >500 0.014187252844897967 1.3306221376113414 >1k 0.00295567767602041 1.0663251739690545 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4129 0.1729522603172369 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3949 0.16541256381515346 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3545 0.148490133888255 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2463 0.10316818047017547 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05922850474414459 0.0 2 0.0 0.0 0.0 0.20386501597577913 0.0 3 0.0 0.0 0.0 0.29442514840635947 0.0 4 0.0 0.0 0.0 0.47399558676431414 0.0 5 0.0 0.0 0.0 0.8205703026434176 0.0 6 0.0 0.0 0.0 1.1399183367094419 0.0 7 0.0 0.0 0.0 1.3037810740213893 0.0 8 0.0 0.0 0.0 1.685541040243549 0.0 9 0.0 0.0 0.0 1.7972960972855416 0.0 10 0.0 0.0 0.0 2.00380000703705 0.0 11 0.0 0.0 0.0 2.2980994938350414 0.0 12 0.0 0.0 0.0 2.539788653929606 0.0 13 0.0 0.0 0.0 2.6435432552388325 0.0 14 0.0 0.0 0.0 2.6851372476086595 0.0 15 4.1887202789352605E-5 0.0 0.0 2.756596815567295 0.0 16 4.1887202789352605E-5 0.0 0.0 2.9150979909222055 0.0 17 4.1887202789352605E-5 0.0 0.0 3.0942495572522666 0.0 18 8.377440557870521E-5 0.0 0.0 3.3094660051839604 0.0 19 8.377440557870521E-5 0.0 0.0 3.4313996525037656 0.0 20 8.377440557870521E-5 0.0 0.0 3.5630092436679117 0.0 21 8.377440557870521E-5 0.0 0.0 3.726494996154755 0.0 22 8.377440557870521E-5 0.0 0.0 3.9049763672401863 0.0 23 8.377440557870521E-5 0.0 0.0 4.093133682169958 0.0 24 8.377440557870521E-5 0.0 0.0 4.233874683542183 0.0 25 8.377440557870521E-5 0.0 0.0 4.354216617155993 0.0 26 8.377440557870521E-5 0.0 0.0 4.472296641819178 0.0 27 1.2566160836805784E-4 0.0 0.0 4.5780199416595035 0.0 28 1.2566160836805784E-4 0.0 0.0 4.698445649678892 0.0 29 1.2566160836805784E-4 0.0 0.0 4.8215102514740105 0.0 30 1.6754881115741042E-4 0.0 0.0 4.9790899083675555 0.0 31 1.6754881115741042E-4 0.0 0.0 5.128752883933912 0.0 32 2.0943601394676303E-4 0.0 0.0 5.269703321320083 0.0 33 2.0943601394676303E-4 0.0 0.0 5.41036054828673 0.0 34 2.0943601394676303E-4 0.0 0.0 5.556379337210413 0.0 35 2.0943601394676303E-4 0.0 0.0 5.74742686913265 0.0 36 2.0943601394676303E-4 0.0 0.0 5.917824010079737 0.0 37 2.0943601394676303E-4 0.0 0.0 6.086964534943142 0.0 38 2.0943601394676303E-4 0.0 0.0 6.241653974844222 0.0 39 2.0943601394676303E-4 0.0 0.0 6.397306820409455 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATAG 125 0.0 45.000004 1 GTCCGTT 35 1.2126657E-7 45.000004 10 CTATTCG 45 3.8562575E-10 45.000004 12 TGTCGAC 35 1.2126657E-7 45.000004 18 TCGAACA 45 3.8562575E-10 45.000004 1 ATCGATC 35 1.2126657E-7 45.000004 12 TATTTCG 20 7.0348155E-4 45.0 44 ATTCGTT 25 3.8920727E-5 45.0 14 TACGCTA 25 3.8920727E-5 45.0 19 TACGCAT 20 7.0348155E-4 45.0 44 CGAATCG 20 7.0348155E-4 45.0 9 CTACCGT 20 7.0348155E-4 45.0 31 ACTCGCT 25 3.8920727E-5 45.0 34 CGTAACA 25 3.8920727E-5 45.0 35 CGTAAAC 20 7.0348155E-4 45.0 44 TGTACGA 25 3.8920727E-5 45.0 19 CCGTTAA 20 7.0348155E-4 45.0 30 TGTTTCG 30 2.1664891E-6 44.999996 1 GTCGACG 30 2.1664891E-6 44.999996 1 TTGCGAA 30 2.1664891E-6 44.999996 12 >>END_MODULE