SRR1545303_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545303_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2290835
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4557	0.19892310009232442	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2825	0.12331748030739882	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCTACG	35	1.2126293E-7	45.000004	1
ATAGCGC	35	1.2126293E-7	45.000004	34
CAGTCGA	35	1.2126293E-7	45.000004	26
AGTCGAT	35	1.2126293E-7	45.000004	27
TCGCCTC	20	7.0347567E-4	45.0	12
AGCCGTG	25	3.8920243E-5	45.0	31
TGCCCGT	20	7.0347567E-4	45.0	13
CGAGTGA	25	3.8920243E-5	45.0	42
GACGTGA	45	3.8562575E-10	45.0	9
TATATCG	20	7.0347567E-4	45.0	1
ATTCGCA	25	3.8920243E-5	45.0	11
TCGATTG	50	2.1827873E-11	45.0	1
TACGGAC	45	3.8562575E-10	45.0	25
CGTTATC	25	3.8920243E-5	45.0	34
CCGTATT	20	7.0347567E-4	45.0	24
ATATCGA	20	7.0347567E-4	45.0	15
CCCGTCG	55	1.8189894E-12	45.0	23
CCCGTAG	25	3.8920243E-5	45.0	13
CCGTAAG	25	3.8920243E-5	45.0	1
CGCTATA	25	3.8920243E-5	45.0	33