##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545303_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2290835 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.239854027025082 31.0 31.0 33.0 30.0 34.0 2 31.5462724290488 31.0 31.0 34.0 30.0 34.0 3 31.625172917298713 31.0 31.0 34.0 30.0 34.0 4 30.233934787970327 35.0 33.0 37.0 0.0 37.0 5 32.78752332664727 35.0 33.0 37.0 19.0 37.0 6 34.38751459620619 35.0 33.0 37.0 30.0 37.0 7 35.49396355477369 36.0 35.0 37.0 33.0 37.0 8 35.70257657142483 37.0 35.0 37.0 35.0 37.0 9 37.74747548383013 39.0 37.0 39.0 35.0 39.0 10 37.14813113995552 39.0 37.0 39.0 33.0 39.0 11 36.601133211252666 39.0 35.0 39.0 32.0 39.0 12 35.25201902363112 35.0 35.0 39.0 31.0 39.0 13 34.69868672339998 35.0 33.0 39.0 28.0 39.0 14 35.42520652949688 36.0 33.0 40.0 27.0 41.0 15 35.85951978208819 36.0 34.0 40.0 30.0 41.0 16 36.12086291679671 36.0 34.0 40.0 31.0 41.0 17 36.067346185997685 36.0 34.0 40.0 31.0 41.0 18 36.06409278712784 36.0 35.0 40.0 31.0 41.0 19 36.032090918813445 36.0 35.0 40.0 31.0 41.0 20 35.91308845901167 36.0 34.0 40.0 31.0 41.0 21 35.723506057834804 35.0 34.0 40.0 30.0 41.0 22 35.57236990005828 35.0 34.0 40.0 30.0 41.0 23 35.55819821156914 35.0 34.0 40.0 30.0 41.0 24 35.48126862039388 35.0 34.0 40.0 30.0 41.0 25 35.36649082103251 35.0 34.0 40.0 30.0 41.0 26 35.20884611942807 35.0 34.0 40.0 29.0 41.0 27 35.18783674948217 35.0 34.0 40.0 29.0 41.0 28 35.268048549982865 36.0 34.0 40.0 29.0 41.0 29 35.37572937378729 36.0 34.0 40.0 30.0 41.0 30 35.333162362195445 36.0 34.0 40.0 30.0 41.0 31 35.17421944400186 35.0 34.0 40.0 29.0 41.0 32 35.05607475003656 35.0 34.0 40.0 29.0 41.0 33 34.921148838742205 35.0 34.0 40.0 29.0 41.0 34 34.87884024820644 35.0 34.0 40.0 29.0 41.0 35 34.75999493634417 35.0 34.0 40.0 29.0 41.0 36 34.53593078506309 35.0 33.0 40.0 27.0 41.0 37 34.44276999434704 35.0 33.0 40.0 27.0 41.0 38 34.45217748113679 35.0 33.0 39.0 27.0 41.0 39 34.460668708134804 35.0 33.0 39.0 27.0 41.0 40 34.34950793051442 35.0 33.0 39.0 26.0 41.0 41 34.40515401589377 35.0 33.0 39.0 27.0 41.0 42 34.34956729751379 35.0 33.0 39.0 27.0 41.0 43 34.23987803573806 35.0 33.0 39.0 27.0 41.0 44 34.17889503172424 35.0 33.0 39.0 27.0 41.0 45 34.10178821259497 35.0 33.0 39.0 27.0 41.0 46 34.094630996994546 35.0 33.0 39.0 27.0 41.0 47 34.030261454884354 35.0 33.0 39.0 26.0 41.0 48 33.96229540756973 35.0 33.0 39.0 26.0 41.0 49 33.98317687655375 35.0 33.0 38.0 26.0 40.0 50 33.77820838253301 35.0 33.0 38.0 26.0 40.0 51 33.69718596057769 35.0 33.0 38.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 1.0 13 7.0 14 7.0 15 36.0 16 131.0 17 403.0 18 1029.0 19 1981.0 20 3626.0 21 5901.0 22 9004.0 23 13435.0 24 18969.0 25 26308.0 26 34013.0 27 41717.0 28 50355.0 29 61503.0 30 75807.0 31 95991.0 32 124270.0 33 184467.0 34 282064.0 35 393823.0 36 152518.0 37 180556.0 38 237805.0 39 294911.0 40 195.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.61049791888111 26.44459334696737 31.774309367545023 11.170599366606499 2 27.180002051653656 26.4510102211639 32.39796842635982 13.971019300822626 3 27.630143593929724 25.8803012875218 31.87597535396482 14.613579764583656 4 21.277176226135886 39.01769442146641 27.454094249476718 12.251035102920987 5 23.086210923091365 32.26971824684012 30.57762780820094 14.066443021867572 6 21.456368529379024 39.988955992029105 26.762425054619822 11.792250423972044 7 89.95418701041324 4.212612431711581 4.152852562493589 1.6803479953815967 8 92.38592041766431 2.3466552588903173 3.366021559824256 1.901402763621125 9 89.60370345310771 3.826377718168266 4.606617237819398 1.9633015909046265 10 62.76418860371873 21.744996911606467 7.784192226851781 7.70662225782302 11 55.02513275726974 15.9732586589606 18.257665872924065 10.743942710845609 12 49.01090650352383 21.76987866869504 17.514443423467863 11.704771404313274 13 19.01258711343244 49.3539691859082 19.16921122647419 12.464232474185177 14 12.33091863883693 48.99410040443769 24.625387686149374 14.049593270576013 15 10.940115721996564 22.19679723768844 54.28169204678643 12.58139499352856 16 12.805243502914877 16.68880561018144 51.30395685416016 19.20199403274352 17 14.004718803405744 18.33060870817846 26.188354901160494 41.4763175872553 18 21.366750551654746 23.409018982161527 34.160164306901194 21.064066159282532 19 31.766190057337173 25.386114669978415 21.938943660281076 20.908751612403336 20 34.01742159518255 24.131506634043916 23.0380625405147 18.813009230258835 21 21.12029019986162 30.391276543269157 26.169235235187173 22.319198021682052 22 22.85162397117208 25.62410649392034 22.79793175850727 28.726337776400307 23 18.997265189330527 33.32579605253107 22.760609122874413 24.916329635264 24 20.070192746313026 23.057531424131376 40.97676174844543 15.895514081110163 25 15.293375559566707 26.91918012427783 36.599013023635486 21.188431292519976 26 14.704681917292167 40.389988803209306 24.412714141350207 20.492615138148317 27 16.252763730255563 37.59851757110398 28.00389377672333 18.14482492191712 28 12.533988698444018 29.783201321788784 41.44362208539681 16.239187894370392 29 12.445898547909387 25.229708817963754 39.50899999345217 22.815392640674688 30 17.915519886853485 33.25887722162443 29.88787931038246 18.93772358113963 31 31.389995351040124 28.244897602839142 21.09239644059917 19.272710605521567 32 32.53508000357948 27.97696036598009 23.043955588246206 16.444004042194223 33 28.479964729018022 28.41627616131236 22.111937350354783 20.991821759314835 34 17.11493843947731 28.353329681098817 27.71513443787964 26.816597441544243 35 19.117919885107394 25.75100345507206 31.28418240510556 23.846894254714986 36 33.14105991919977 23.119473903620296 25.346260206431282 18.393205970748657 37 19.44286690224307 33.278258800830265 29.76364513376127 17.515229163165397 38 19.07444228851052 35.103182900558096 22.72542544530706 23.096949365624326 39 19.652266531635846 34.53605344776031 26.22301475226282 19.588665268341018 40 25.064572524865387 25.269563281510894 23.43844056861363 26.227423625010093 41 15.870414062994499 23.028590011938878 26.874785831367166 34.226210093699464 42 22.154454598432448 24.81186990769741 22.716564047607097 30.317111446263045 43 22.103119604860236 26.604185809977583 25.11555830079425 26.177136284367926 44 18.747792835363526 32.164734692808516 27.171227958364526 21.916244513463432 45 15.304899741797204 41.1816652006801 19.919548985413616 23.593886072109076 46 22.133283278804452 34.61938550790432 23.930837445734852 19.316493767556373 47 20.306569438654464 26.774385758904508 27.800212586240384 25.118832216200644 48 22.97856458452922 21.856179078807507 32.807382460980385 22.357873875682884 49 20.38610375692706 22.50650963513304 32.573755857580316 24.533630750359585 50 18.592129070840983 35.424070262589844 25.201727754290467 20.78207291227871 51 16.530129843485017 35.94920629377498 22.48725901254346 25.033404850196543 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 403.0 1 632.0 2 861.0 3 2989.5 4 5118.0 5 3773.5 6 2429.0 7 2844.0 8 3259.0 9 3831.5 10 4404.0 11 4644.0 12 4884.0 13 4910.5 14 4937.0 15 4903.0 16 4869.0 17 4617.5 18 4366.0 19 4296.0 20 4226.0 21 4719.5 22 5213.0 23 5294.5 24 5376.0 25 7425.0 26 13381.5 27 17289.0 28 20316.0 29 23343.0 30 27089.5 31 30836.0 32 35785.5 33 40735.0 34 48182.5 35 55630.0 36 61380.5 37 67131.0 38 89894.0 39 112657.0 40 158554.0 41 204451.0 42 247092.0 43 289733.0 44 284826.5 45 279920.0 46 259136.5 47 238353.0 48 217937.0 49 197521.0 50 187042.0 51 176563.0 52 151887.5 53 127212.0 54 111657.0 55 96102.0 56 83758.5 57 71415.0 58 65578.0 59 59741.0 60 53978.0 61 48215.0 62 42327.0 63 36439.0 64 29144.0 65 21849.0 66 17485.5 67 13122.0 68 11395.5 69 9669.0 70 7649.0 71 5629.0 72 4493.0 73 3357.0 74 2775.5 75 1784.0 76 1374.0 77 841.5 78 309.0 79 215.0 80 121.0 81 85.5 82 50.0 83 46.5 84 43.0 85 27.5 86 12.0 87 6.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2290835.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.360431816822132 #Duplication Level Percentage of deduplicated Percentage of total 1 76.91593026309349 13.352937629598804 2 10.154326533496766 3.5256698686103682 3 3.708372135177418 1.9313682481245202 4 1.8264130454382248 1.2682927657873904 5 1.0117428297764008 0.8782146206245943 6 0.6256970954494954 0.6517423058120768 7 0.4343242198972411 0.5278039204144361 8 0.2989907015192772 0.4152486150071383 9 0.25037830270515105 0.39120079072719843 >10 2.2269189983398516 9.057685157908557 >50 0.8877292417230108 11.260969444477444 >100 1.6379365583140368 53.73172286911245 >500 0.01851698852227034 2.088516205384306 >1k 0.002723086547392697 0.9186275584107343 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4557 0.19892310009232442 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2825 0.12331748030739882 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09594754750996907 0.0 2 0.0 0.0 0.0 0.35480512564196026 0.0 3 0.0 0.0 0.0 0.510992716629526 0.0 4 0.0 0.0 0.0 0.7729932535516526 0.0 5 0.0 0.0 0.0 1.2761722254112584 0.0 6 0.0 0.0 0.0 1.7346513389222706 0.0 7 0.0 0.0 0.0 1.981897430412928 0.0 8 0.0 0.0 0.0 2.566400460967289 0.0 9 0.0 0.0 0.0 2.7477753744813573 0.0 10 0.0 0.0 0.0 3.0515510719890346 0.0 11 0.0 0.0 0.0 3.556912654119568 0.0 12 0.0 0.0 0.0 3.9297461405993883 0.0 13 0.0 0.0 0.0 4.078163639022453 0.0 14 0.0 0.0 0.0 4.136832203104982 0.0 15 0.0 0.0 0.0 4.23160114106865 0.0 16 0.0 0.0 0.0 4.468763573107623 0.0 17 0.0 0.0 0.0 4.763939786147846 0.0 18 0.0 0.0 0.0 5.088712194461845 0.0 19 0.0 0.0 0.0 5.28789720778668 0.0 20 0.0 0.0 0.0 5.471367427160839 0.0 21 0.0 0.0 0.0 5.740483273566189 0.0 22 0.0 0.0 0.0 6.025357566127635 0.0 23 0.0 0.0 0.0 6.339435184114089 0.0 24 0.0 0.0 0.0 6.561450300872826 0.0 25 0.0 0.0 0.0 6.740031473240107 0.0 26 0.0 0.0 0.0 6.911715597151257 0.0 27 0.0 0.0 0.0 7.088245115863867 0.0 28 0.0 0.0 0.0 7.270973247745909 0.0 29 0.0 0.0 0.0 7.471555131644139 0.0 30 0.0 0.0 0.0 7.726614967904716 0.0 31 0.0 0.0 0.0 7.955745394146676 0.0 32 0.0 0.0 0.0 8.148295272247893 0.0 33 0.0 0.0 0.0 8.349444634816562 0.0 34 0.0 0.0 0.0 8.574559058160016 0.0 35 4.365220541854826E-5 0.0 0.0 8.857032479423442 0.0 36 4.365220541854826E-5 0.0 0.0 9.083980295394474 0.0 37 4.365220541854826E-5 0.0 0.0 9.312936112814759 0.0 38 4.365220541854826E-5 0.0 0.0 9.539054536882839 0.0 39 4.365220541854826E-5 0.0 0.0 9.78529662764887 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCTACG 35 1.2126293E-7 45.000004 1 ATAGCGC 35 1.2126293E-7 45.000004 34 CAGTCGA 35 1.2126293E-7 45.000004 26 AGTCGAT 35 1.2126293E-7 45.000004 27 TCGCCTC 20 7.0347567E-4 45.0 12 AGCCGTG 25 3.8920243E-5 45.0 31 TGCCCGT 20 7.0347567E-4 45.0 13 CGAGTGA 25 3.8920243E-5 45.0 42 GACGTGA 45 3.8562575E-10 45.0 9 TATATCG 20 7.0347567E-4 45.0 1 ATTCGCA 25 3.8920243E-5 45.0 11 TCGATTG 50 2.1827873E-11 45.0 1 TACGGAC 45 3.8562575E-10 45.0 25 CGTTATC 25 3.8920243E-5 45.0 34 CCGTATT 20 7.0347567E-4 45.0 24 ATATCGA 20 7.0347567E-4 45.0 15 CCCGTCG 55 1.8189894E-12 45.0 23 CCCGTAG 25 3.8920243E-5 45.0 13 CCGTAAG 25 3.8920243E-5 45.0 1 CGCTATA 25 3.8920243E-5 45.0 33 >>END_MODULE