##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545302_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2217514 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.325547888310965 31.0 31.0 33.0 30.0 34.0 2 31.648952836374427 31.0 31.0 34.0 30.0 34.0 3 31.750865158010278 31.0 31.0 34.0 30.0 34.0 4 30.306051731804175 35.0 33.0 37.0 0.0 37.0 5 32.90082633074695 35.0 33.0 37.0 19.0 37.0 6 34.5496898779444 35.0 33.0 37.0 30.0 37.0 7 35.517286474854274 36.0 35.0 37.0 33.0 37.0 8 35.71077251372483 37.0 35.0 37.0 35.0 37.0 9 37.76052597638617 39.0 37.0 39.0 35.0 39.0 10 37.20831661040246 39.0 37.0 39.0 33.0 39.0 11 36.754475507257226 39.0 35.0 39.0 32.0 39.0 12 35.70820883205247 37.0 35.0 39.0 32.0 39.0 13 35.30684180573381 37.0 35.0 39.0 30.0 39.0 14 36.137890899448664 38.0 35.0 40.0 31.0 41.0 15 36.45225419095438 38.0 35.0 40.0 31.0 41.0 16 36.636012670044025 38.0 35.0 40.0 32.0 41.0 17 36.57771585658535 38.0 35.0 40.0 32.0 41.0 18 36.588172160356145 37.0 35.0 40.0 32.0 41.0 19 36.559612701430524 37.0 35.0 40.0 31.0 41.0 20 36.45131710555153 37.0 35.0 40.0 31.0 41.0 21 36.29170638832495 37.0 35.0 40.0 31.0 41.0 22 36.158942852221 37.0 35.0 40.0 31.0 41.0 23 36.1018049942413 37.0 34.0 40.0 31.0 41.0 24 36.04334809160168 37.0 34.0 40.0 31.0 41.0 25 35.91209660908567 36.0 34.0 40.0 31.0 41.0 26 35.79129962651871 36.0 34.0 40.0 30.0 41.0 27 35.786795032635645 36.0 34.0 40.0 30.0 41.0 28 35.81909065737578 36.0 34.0 40.0 30.0 41.0 29 35.853452108983305 36.0 34.0 40.0 30.0 41.0 30 35.81833034650514 36.0 34.0 40.0 30.0 41.0 31 35.694302268215665 36.0 34.0 40.0 30.0 41.0 32 35.56662280373427 36.0 34.0 40.0 30.0 41.0 33 35.43935866921246 36.0 34.0 40.0 30.0 41.0 34 35.37169686414607 36.0 34.0 40.0 29.0 41.0 35 35.23826320825934 36.0 34.0 40.0 29.0 41.0 36 35.08083827204699 36.0 34.0 40.0 28.0 41.0 37 35.03584960455718 36.0 34.0 40.0 28.0 41.0 38 35.01513316263167 35.0 34.0 40.0 28.0 41.0 39 34.97263782776569 35.0 34.0 40.0 28.0 41.0 40 34.868709284360776 35.0 34.0 40.0 27.0 41.0 41 34.86222183941116 35.0 34.0 40.0 28.0 41.0 42 34.796382796230375 35.0 34.0 40.0 27.0 41.0 43 34.714114093529965 35.0 33.0 40.0 27.0 41.0 44 34.64442479280852 35.0 33.0 40.0 27.0 41.0 45 34.54928221422728 35.0 33.0 40.0 27.0 41.0 46 34.5028545479307 35.0 33.0 39.0 27.0 41.0 47 34.42547014359323 35.0 33.0 39.0 27.0 41.0 48 34.34788326026352 35.0 33.0 39.0 27.0 41.0 49 34.31158315122249 35.0 33.0 39.0 27.0 41.0 50 34.14309582712894 35.0 33.0 39.0 26.0 41.0 51 34.050538576081145 35.0 33.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 4.0 14 8.0 15 31.0 16 86.0 17 247.0 18 641.0 19 1289.0 20 2556.0 21 4303.0 22 6757.0 23 10388.0 24 15112.0 25 20979.0 26 27882.0 27 35065.0 28 42664.0 29 52246.0 30 66510.0 31 84551.0 32 110888.0 33 163453.0 34 250190.0 35 344419.0 36 166565.0 37 205777.0 38 269562.0 39 335120.0 40 219.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.789472355078708 25.186537717461988 31.29215869663055 11.731831230828757 2 28.01736539205615 26.752255002674165 31.34023054645878 13.890149058810902 3 28.40076770653985 26.63203028255966 30.872815233635503 14.094386777264992 4 22.320896282954696 38.548212096969856 26.093679679136184 13.037211940939267 5 24.673079854287277 32.60060590372823 29.025340989955417 13.700973252029074 6 21.8894672141867 41.59581405123034 24.963269679469892 11.551449055113068 7 90.40493092715536 4.115419338953441 3.7155571509356875 1.7640925829555079 8 92.387827089254 2.3443369466889497 3.4064722928468543 1.8613636712101929 9 88.66216853647823 4.482497066534868 4.569035415334469 2.286298981652427 10 57.62078615963642 25.119615930271465 8.730948260078629 8.528649650013485 11 49.86146648905035 19.60821893345431 17.76602086841391 12.764293709081432 12 45.58970089929534 22.19020939664868 18.737063215835388 13.483026488220592 13 21.65469981249273 43.02795833532505 19.732231679258845 15.585110172923372 14 14.841845417886876 43.995167561512574 24.559574370218183 16.603412650382367 15 14.04920104224821 23.841382737606164 47.11821436076615 14.991201859379466 16 16.20066434755316 19.08064616502985 45.500456817860005 19.21823266955699 17 16.917142349495876 20.297594513495742 26.310093194451085 36.475169942557294 18 21.870842754544054 24.788253873481747 31.29017449269768 22.050728879276523 19 31.633982919611782 25.44746053463473 21.695421088660545 21.223135457092944 20 34.763433286103265 24.215224796776933 22.0421156303861 18.979226286733702 21 24.119757530279404 29.17550915123873 24.955332863738402 21.749400454743466 22 24.10947574626361 25.95036604053007 22.540286104168903 27.399872109037414 23 22.256950801663482 31.473848643120178 22.721795668482812 23.54740488673352 24 21.823176764611183 23.044454285294254 37.07002526252371 18.062343687570856 25 18.08818343424213 26.956222147864683 33.20691549185259 21.7486789260406 26 17.738828255424767 38.34564291364113 23.535634949768074 20.379893881166026 27 19.25967547442767 35.54439791586434 27.24415719585085 17.95176941385714 28 15.983303825815756 29.297492597566468 37.50993229355035 17.209271283067434 29 16.496355829095105 25.96479661458733 35.72072149262643 21.818126063691142 30 20.388552225600378 32.0811954287549 27.76735569651421 19.76289664913051 31 31.164357925135988 27.427921537361204 21.437294195211397 19.970426342291415 32 32.82978145797501 27.4235472696001 22.233501118820445 17.51317015360444 33 29.427367764081758 28.183542471434226 22.27562035685006 20.113469407633954 34 19.716448238883725 27.543366129819248 27.319692231931793 25.420493399365235 35 22.01659155252233 25.021082166786773 28.98921945926835 23.973106821422547 36 30.90875638214686 26.003308209102627 23.43529736452622 19.6526380442243 37 22.13695155926862 32.622928197973046 26.823100102186505 18.41702014057183 38 21.265344886210414 33.33782785587825 23.03651746956276 22.360309788348573 39 21.82876861205837 32.350956972537716 25.046155289211253 20.774119126192662 40 26.349010648861743 25.609714301690996 23.732927954457107 24.308347094990157 41 17.93621145120166 24.149791162536065 26.383779313230942 31.530218073031328 42 22.71895464921529 25.52827174935536 22.79142318830907 28.96135041312028 43 22.42700609781945 27.10323362107297 23.97590274514614 26.49385753596144 44 20.50228318738912 31.37012889208366 26.306530646480695 21.821057274046524 45 18.402273897707072 37.23394756470534 20.91035276440194 23.45342577318565 46 21.999725819092912 34.03441872294831 23.273404361821388 20.692451096137386 47 22.03751588490535 26.91577144496044 26.20650873004635 24.840203940087864 48 24.287152189343562 21.97140581750555 30.880346189471634 22.861095803679255 49 21.067059779554942 24.535944305199425 31.097751806752967 23.299244108492665 50 19.016069346123633 33.855614891270136 25.20484650829713 21.923469254309104 51 18.009221136822585 34.56136015375776 22.92562752704154 24.503791182378105 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 352.0 1 723.0 2 1094.0 3 3534.5 4 5975.0 5 4370.0 6 2765.0 7 3073.5 8 3382.0 9 3684.5 10 3987.0 11 4234.5 12 4482.0 13 4360.5 14 4239.0 15 4241.0 16 4243.0 17 4122.0 18 4001.0 19 4570.5 20 5140.0 21 5716.5 22 6293.0 23 6609.5 24 6926.0 25 7803.5 26 11460.5 27 14240.0 28 18650.0 29 23060.0 30 28127.0 31 33194.0 32 37856.5 33 42519.0 34 48217.0 35 53915.0 36 56572.0 37 59229.0 38 77856.0 39 96483.0 40 134482.0 41 172481.0 42 203011.0 43 233541.0 44 235435.5 45 237330.0 46 221178.0 47 205026.0 48 189787.0 49 174548.0 50 164283.0 51 154018.0 52 141042.5 53 128067.0 54 115958.5 55 103850.0 56 96640.5 57 89431.0 58 87595.5 59 85760.0 60 80232.5 61 74705.0 62 67514.5 63 60324.0 64 48183.5 65 36043.0 66 31716.0 67 27389.0 68 23275.5 69 19162.0 70 15685.0 71 12208.0 72 10203.5 73 8199.0 74 6886.5 75 4269.5 76 2965.0 77 2159.0 78 1353.0 79 1148.0 80 943.0 81 611.0 82 279.0 83 156.5 84 34.0 85 35.0 86 36.0 87 34.0 88 32.0 89 21.5 90 11.0 91 7.5 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2217514.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.914940031180695 #Duplication Level Percentage of deduplicated Percentage of total 1 77.70899306074104 13.921519505666124 2 9.442438886657104 3.3832145280510124 3 3.2366015000745505 1.7395056533599518 4 1.4596971283172304 1.0460154606995942 5 0.8279882905050596 0.7416680285458981 6 0.5649413765316909 0.6072534529018749 7 0.40307772315336327 0.505477926673815 8 0.3130000188263765 0.44859012536263715 9 0.25200556378130945 0.40631981063994366 >10 2.9659193239999047 12.785992952908565 >50 1.2506515450777425 16.225395892228452 >100 1.5623490831699867 46.37138158354143 >500 0.009869199331692927 1.069726103616932 >1k 0.0024672998329232317 0.7479389758037858 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3077 0.13875898866929365 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08744025967818016 0.0 2 0.0 0.0 0.0 0.2791414169200285 0.0 3 0.0 0.0 0.0 0.3923312321816232 0.0 4 0.0 0.0 0.0 0.570413535156937 0.0 5 0.0 0.0 0.0 0.969238525664325 0.0 6 0.0 0.0 0.0 1.3117391818044892 0.0 7 0.0 0.0 0.0 1.5056049251549257 0.0 8 4.509554392892221E-5 0.0 0.0 1.956379982268432 0.0 9 4.509554392892221E-5 0.0 0.0 2.0876982061894536 0.0 10 4.509554392892221E-5 0.0 0.0 2.337347137379967 0.0 11 4.509554392892221E-5 0.0 0.0 2.7620118745586275 0.0 12 4.509554392892221E-5 0.0 0.0 3.0866095997590093 0.0 13 9.019108785784442E-5 0.0 0.0 3.2202276964204057 0.0 14 9.019108785784442E-5 0.0 0.0 3.277949992649426 0.0 15 9.019108785784442E-5 0.0 0.0 3.367915602787626 0.0 16 9.019108785784442E-5 0.0 0.0 3.580586187956423 0.0 17 9.019108785784442E-5 0.0 0.0 3.840832571970233 0.0 18 9.019108785784442E-5 0.0 0.0 4.1175388295181 0.0 19 9.019108785784442E-5 0.0 0.0 4.303648139312762 0.0 20 1.3528663178676663E-4 0.0 0.0 4.47695031463161 0.0 21 1.3528663178676663E-4 0.0 0.0 4.718436952370989 0.0 22 1.3528663178676663E-4 0.0 0.0 4.987116203099507 0.0 23 1.3528663178676663E-4 0.0 0.0 5.28781329001756 0.0 24 1.3528663178676663E-4 0.0 0.0 5.50373075434924 0.0 25 1.3528663178676663E-4 0.0 0.0 5.6792877068645335 0.0 26 1.3528663178676663E-4 0.0 0.0 5.846592174840835 0.0 27 1.3528663178676663E-4 0.0 0.0 6.010965432461757 0.0 28 1.3528663178676663E-4 0.0 0.0 6.189633977508146 0.0 29 1.3528663178676663E-4 0.0 0.0 6.376780484813174 0.0 30 1.3528663178676663E-4 0.0 0.0 6.613712472615731 0.0 31 1.3528663178676663E-4 0.0 0.0 6.834364969059948 0.0 32 1.3528663178676663E-4 0.0 0.0 7.036167528141874 0.0 33 1.3528663178676663E-4 0.0 0.0 7.238375947119161 0.0 34 1.3528663178676663E-4 0.0 0.0 7.458216723772657 0.0 35 1.3528663178676663E-4 0.0 0.0 7.731631006613712 0.0 36 1.3528663178676663E-4 0.0 0.0 7.9722157334745125 0.0 37 1.3528663178676663E-4 0.0 0.0 8.203510778285954 0.0 38 1.8038217571568883E-4 0.0 0.0 8.428176778139845 0.0 39 1.8038217571568883E-4 0.0 0.0 8.66393628180025 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTACG 20 7.0347084E-4 45.0 39 ACGTTAC 50 2.1827873E-11 45.0 29 TACGCTA 35 1.2126111E-7 45.0 1 TACGACA 40 6.8193913E-9 45.0 43 ACTAACG 70 0.0 45.0 1 ACTCGCT 35 1.2126111E-7 45.0 15 ATGGTCG 20 7.0347084E-4 45.0 44 CGTCGGT 35 1.2126111E-7 45.0 17 TTACGCG 40 6.8193913E-9 45.0 1 CCGAATA 35 1.2126111E-7 45.0 40 CACCGTA 20 7.0347084E-4 45.0 38 TGTAACG 70 0.0 45.0 1 TATCGCC 50 2.1827873E-11 45.0 38 TACGTCG 40 6.8193913E-9 45.0 26 TCTATCG 20 7.0347084E-4 45.0 32 CGCTAAT 30 2.1664182E-6 44.999996 19 TATTACG 30 2.1664182E-6 44.999996 1 GAACCGT 30 2.1664182E-6 44.999996 17 GCGTAAG 130 0.0 44.999996 1 ACGTAAG 195 0.0 42.69231 1 >>END_MODULE