##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545301_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5567757 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.243575464949352 31.0 31.0 33.0 30.0 34.0 2 31.561022688310572 31.0 31.0 34.0 30.0 34.0 3 31.66555383074369 31.0 31.0 34.0 30.0 34.0 4 30.301013316493517 35.0 33.0 37.0 0.0 37.0 5 32.84854924523466 35.0 33.0 37.0 19.0 37.0 6 34.45704975989433 35.0 33.0 37.0 30.0 37.0 7 35.48113611998512 36.0 35.0 37.0 33.0 37.0 8 35.67419249798438 37.0 35.0 37.0 35.0 37.0 9 37.70758565792293 39.0 37.0 39.0 35.0 39.0 10 37.11329445591824 39.0 37.0 39.0 33.0 39.0 11 36.67636446777401 39.0 35.0 39.0 32.0 39.0 12 35.68956062558046 37.0 35.0 39.0 31.0 39.0 13 35.25420613722905 37.0 35.0 39.0 30.0 39.0 14 35.98217989757814 38.0 35.0 40.0 30.0 41.0 15 36.310790503249336 38.0 35.0 40.0 31.0 41.0 16 36.48789377841023 38.0 35.0 40.0 31.0 41.0 17 36.4348706310279 38.0 35.0 40.0 31.0 41.0 18 36.426241123669726 38.0 35.0 40.0 31.0 41.0 19 36.42362175648111 38.0 35.0 40.0 31.0 41.0 20 36.32541578233389 38.0 35.0 40.0 31.0 41.0 21 36.174360878177694 37.0 34.0 40.0 30.0 41.0 22 36.09550470683257 37.0 34.0 40.0 30.0 41.0 23 36.057618175505866 37.0 34.0 40.0 30.0 41.0 24 35.977177703696476 37.0 34.0 40.0 30.0 41.0 25 35.86133213069464 37.0 34.0 40.0 30.0 41.0 26 35.72439996932337 37.0 34.0 40.0 30.0 41.0 27 35.7378403906636 37.0 34.0 40.0 30.0 41.0 28 35.754903994552926 37.0 34.0 40.0 30.0 41.0 29 35.75954482208904 37.0 34.0 40.0 30.0 41.0 30 35.67903951267988 36.0 34.0 40.0 30.0 41.0 31 35.542818948456265 36.0 34.0 40.0 29.0 41.0 32 35.47269448002131 36.0 34.0 40.0 29.0 41.0 33 35.350100767687955 36.0 34.0 40.0 29.0 41.0 34 35.218168106115264 36.0 34.0 40.0 28.0 41.0 35 35.106449329595385 36.0 34.0 40.0 28.0 41.0 36 34.976354751114314 36.0 34.0 40.0 27.0 41.0 37 34.9099240502055 36.0 33.0 40.0 27.0 41.0 38 34.87700415086363 36.0 33.0 40.0 27.0 41.0 39 34.805806000513314 36.0 33.0 40.0 27.0 41.0 40 34.660551277650946 35.0 33.0 40.0 26.0 41.0 41 34.61611992046348 35.0 33.0 40.0 26.0 41.0 42 34.56961807061623 35.0 33.0 40.0 26.0 41.0 43 34.499822639529704 35.0 33.0 40.0 26.0 41.0 44 34.45881492313691 35.0 33.0 40.0 26.0 41.0 45 34.37775463261058 35.0 33.0 40.0 26.0 41.0 46 34.30890033455124 35.0 33.0 39.0 26.0 41.0 47 34.236084297500774 35.0 33.0 39.0 26.0 41.0 48 34.12454530612597 35.0 33.0 39.0 26.0 41.0 49 34.09534306184699 35.0 33.0 39.0 26.0 41.0 50 33.940392154327135 35.0 33.0 39.0 25.0 41.0 51 33.86188244206778 35.0 33.0 39.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 0.0 10 4.0 11 4.0 12 7.0 13 23.0 14 43.0 15 132.0 16 430.0 17 1116.0 18 2670.0 19 5069.0 20 8947.0 21 14150.0 22 21509.0 23 31456.0 24 44761.0 25 60350.0 26 78252.0 27 97503.0 28 117426.0 29 143699.0 30 177569.0 31 221687.0 32 281328.0 33 402691.0 34 588733.0 35 764910.0 36 432368.0 37 545536.0 38 694938.0 39 830012.0 40 432.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.81852225231812 25.127210113516092 31.06254457584984 11.991723058315944 2 27.856244444576156 26.18179996001981 32.46136639943158 13.500589195972454 3 28.35513475175012 26.492948596714978 31.065346422266632 14.086570229268267 4 22.593407003933542 38.14913258606653 26.396895554170197 12.860564855829734 5 23.84676630104367 32.22597537931343 29.12097277233902 14.80628554730388 6 21.721368227815976 40.976249502268146 26.268513514508623 11.033868755407248 7 90.09960384406143 4.123653385016624 4.064599083616616 1.7121436873053189 8 92.40008139723052 2.3720144395669567 3.3570789817156172 1.8708251814869077 9 88.71594072801669 4.092958798309625 4.8265217034435945 2.3645787702300947 10 56.787212516638206 22.575338686656043 10.050672110869781 10.586776685835966 11 47.908107340173075 20.34797854863278 17.717080684376132 14.026833426818017 12 44.19276918874153 20.801895628706497 20.067183248119484 14.938151934432483 13 24.295187451607532 36.210057299555274 21.44337477371947 18.051380475117718 14 16.994473717153962 37.72908911074963 26.211668361244932 19.06476881085148 15 16.663011693937076 23.136695800481235 43.470701038137975 16.72959146744371 16 20.713044768297177 18.38566230530535 40.91613552818487 19.985157398212603 17 20.679709980158975 20.14856251808403 26.11956664056998 33.052160861187005 18 24.639850481980446 24.973324087240158 28.66393055587735 21.72289487490205 19 33.07831142774371 25.199483382626077 21.21717955722565 20.505025632404575 20 34.1784851601821 25.25729840580327 21.742238391510263 18.82197804250437 21 26.12109328765605 28.30100164213345 25.201692530762386 20.37621253944811 22 24.990727864021363 25.577121990058117 23.94662698102665 25.48552316489387 23 24.015272218237975 29.18841465243544 23.86318224735742 22.933130881969166 24 23.435990471566917 23.659509565521628 34.08149816883172 18.823001794079737 25 21.78925912176124 24.647232269655447 30.873653429918008 22.689855178665304 26 19.197982239526617 33.977650245871004 24.11849152181031 22.70587599279207 27 20.22279348757498 32.32118427582238 27.093675244806843 20.3623469917958 28 17.86556058391198 28.714166225286053 33.55755288889224 19.86272030190973 29 19.17515437545137 26.288413808289405 32.72118377292687 21.81524804333235 30 23.204101759469747 28.162274323394502 27.45231158615579 21.181312330979964 31 29.963771766619846 26.374319137850303 22.663902178202104 20.99800691732775 32 33.21795473473429 25.254891691573466 22.756165543862636 18.770988029829606 33 30.05856757038786 26.02389076965823 22.31471308823284 21.602828571721073 34 21.004346992873433 25.897161100960403 27.713817251722734 25.384674654443433 35 22.23942244605862 24.91807742327835 28.677239326357096 24.165260804305934 36 29.952330893751288 25.881589300682485 23.13267263639559 21.033407169170637 37 22.694183672168165 30.975022796433105 26.107910241053983 20.222883290344747 38 23.300945066388493 30.94172392940281 22.700972761562692 23.056358242646006 39 23.05508304331529 29.332584019022384 24.571546495294243 23.040786442368084 40 26.287731307239167 23.217518293273216 24.87827683571679 25.616473563770832 41 19.555469105422524 22.77694590478715 26.87130562630517 30.79627936348515 42 22.525552031096186 24.488281367164554 24.165458370399424 28.820708231339836 43 21.87017141732299 25.674899245782456 25.821834537678278 26.633094799216273 44 21.758438811176564 28.514768155291257 26.209297568123034 23.51749546540914 45 19.559689835601663 32.466610881186085 21.823940951445977 26.149758331766275 46 21.8925861886573 30.593163458821927 23.907383170637655 23.606867181883118 47 21.58863973409759 26.16200742956275 27.25664931138338 24.99270352495628 48 22.895719048083457 23.085274734511582 30.042528795707142 23.976477421697822 49 22.12914464478245 23.471390723409804 29.953085237017348 24.446379394790398 50 19.70071610524669 30.71274482704615 25.59889018145009 23.98764888625707 51 17.992721305904695 32.16877101497066 24.01572123208682 25.822786447037828 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 911.0 1 1722.0 2 2533.0 3 7682.0 4 12831.0 5 9397.0 6 5963.0 7 6572.5 8 7182.0 9 7756.0 10 8330.0 11 8613.0 12 8896.0 13 8697.0 14 8498.0 15 8503.5 16 8509.0 17 9543.5 18 10578.0 19 10423.5 20 10269.0 21 11058.0 22 11847.0 23 14252.0 24 16657.0 25 18406.5 26 27608.5 27 35061.0 28 41386.0 29 47711.0 30 61398.5 31 75086.0 32 86454.5 33 97823.0 34 113803.0 35 129783.0 36 135617.5 37 141452.0 38 179429.0 39 217406.0 40 293876.5 41 370347.0 42 435744.0 43 501141.0 44 495376.5 45 489612.0 46 458908.0 47 428204.0 48 416558.0 49 404912.0 50 394029.0 51 383146.0 52 363536.0 53 343926.0 54 319096.0 55 294266.0 56 298701.5 57 303137.0 58 300309.0 59 297481.0 60 287014.0 61 276547.0 62 236911.0 63 197275.0 64 167362.0 65 137449.0 66 117396.0 67 97343.0 68 80864.5 69 64386.0 70 53688.0 71 42990.0 72 35548.0 73 28106.0 74 21716.0 75 11461.0 76 7596.0 77 5482.0 78 3368.0 79 2817.5 80 2267.0 81 1436.5 82 606.0 83 460.0 84 314.0 85 355.5 86 397.0 87 243.0 88 89.0 89 56.5 90 24.0 91 17.5 92 11.0 93 10.0 94 9.0 95 4.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5567757.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.456832519730492 #Duplication Level Percentage of deduplicated Percentage of total 1 76.56798161847969 11.069304866321636 2 10.073809945698411 2.912707664411145 3 3.6503558292599347 1.5831774858309837 4 1.8956815674787308 1.0962220372712077 5 1.083644073639279 0.7833030441800776 6 0.7307413168763381 0.6338522899997117 7 0.5122018470532663 0.5183371423401978 8 0.403285517648703 0.4664184949024092 9 0.29507486625468704 0.38392631300032964 >10 2.2158080995955527 6.9184710686664905 >50 0.6994026659186438 7.421623442152571 >100 1.8135354954216438 60.08415437022332 >500 0.053592753797330375 4.830517255997733 >1k 0.0046130471623018554 1.0683353752595628 >5k 2.713557154295209E-4 0.22964914944256895 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6118 0.10988266908918617 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 5590 0.10039949660159378 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06453227035590814 0.0 2 0.0 0.0 0.0 0.22114830083281292 0.0 3 0.0 0.0 0.0 0.31522568244267846 0.0 4 0.0 0.0 0.0 0.5040090650507916 0.0 5 0.0 0.0 0.0 0.8543655910270509 0.0 6 0.0 0.0 0.0 1.2059613952261208 0.0 7 0.0 0.0 0.0 1.3992708374305847 0.0 8 0.0 0.0 0.0 1.8617910228481596 0.0 9 0.0 0.0 0.0 1.996387414177738 0.0 10 0.0 0.0 0.0 2.2305391560730827 0.0 11 0.0 0.0 0.0 2.6044958499446005 0.0 12 0.0 0.0 0.0 2.8864585864648906 0.0 13 0.0 0.0 0.0 2.9973470465754883 0.0 14 0.0 0.0 0.0 3.043038695833888 0.0 15 0.0 0.0 0.0 3.1125460396349913 0.0 16 0.0 0.0 0.0 3.2693416756514337 0.0 17 1.7960553953773485E-5 0.0 0.0 3.453976170296225 0.0 18 1.7960553953773485E-5 0.0 0.0 3.6719813741871277 0.0 19 3.592110790754697E-5 0.0 0.0 3.8158633719108073 0.0 20 5.388166186132046E-5 0.0 0.0 3.965241299144341 0.0 21 5.388166186132046E-5 0.0 0.0 4.166579108966142 0.0 22 5.388166186132046E-5 0.0 0.0 4.376178773606679 0.0 23 7.184221581509394E-5 0.0 0.0 4.595495097936206 0.0 24 8.980276976886743E-5 0.0 0.0 4.758684691160193 0.0 25 8.980276976886743E-5 0.0 0.0 4.898345958704735 0.0 26 8.980276976886743E-5 0.0 0.0 5.028757540963085 0.0 27 8.980276976886743E-5 0.0 0.0 5.172890986442116 0.0 28 1.0776332372264092E-4 0.0 0.0 5.314096861626684 0.0 29 1.0776332372264092E-4 0.0 0.0 5.483393043194953 0.0 30 1.0776332372264092E-4 0.0 0.0 5.694124222734577 0.0 31 1.0776332372264092E-4 0.0 0.0 5.885942938960878 0.0 32 1.0776332372264092E-4 0.0 0.0 6.050264047083951 0.0 33 1.257238776764144E-4 0.0 0.0 6.212214362085127 0.0 34 1.257238776764144E-4 0.0 0.0 6.402398667901634 0.0 35 1.257238776764144E-4 0.0 0.0 6.626959473985664 0.0 36 1.4368443163018788E-4 0.0 0.0 6.822424182664581 0.0 37 1.4368443163018788E-4 0.0 0.0 7.0291860797804215 0.0 38 1.6164498558396138E-4 0.0 0.0 7.284944368082156 0.0 39 1.6164498558396138E-4 0.0 0.0 7.723074121230506 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTAAG 165 0.0 42.272728 1 TACGGGA 1265 0.0 41.264824 4 CGTAAGG 790 0.0 41.012657 2 TACGTAA 50 1.0822987E-9 40.5 1 ATCGGAT 95 0.0 40.263157 20 GCGAATG 700 0.0 39.857143 1 TGTTACG 435 0.0 39.827587 1 TATACGG 450 0.0 39.500004 2 CGTTAGG 930 0.0 39.19355 2 TAAACGG 575 0.0 39.130436 2 TTGTACG 115 0.0 39.130436 1 CGTTTTT 5280 0.0 39.076702 1 ATAGGGC 2675 0.0 38.859814 4 ATGCACG 70 0.0 38.571426 1 TCGTCCC 2120 0.0 38.525944 38 TCGATTG 260 0.0 38.076927 1 AATACGG 435 0.0 37.75862 2 TTAGGGA 4105 0.0 37.710106 4 CGTTGAT 1170 0.0 37.692307 25 TATGGGC 1415 0.0 37.685513 4 >>END_MODULE