##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545300_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2402970 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.260606249765914 31.0 31.0 33.0 30.0 34.0 2 31.579946482894087 31.0 31.0 34.0 30.0 34.0 3 31.685926166369118 31.0 31.0 34.0 30.0 34.0 4 30.29836826926678 35.0 33.0 37.0 0.0 37.0 5 32.86771412044262 35.0 33.0 37.0 19.0 37.0 6 34.50791686954061 35.0 33.0 37.0 30.0 37.0 7 35.455714802931375 36.0 35.0 37.0 33.0 37.0 8 35.6418802565159 37.0 35.0 37.0 35.0 37.0 9 37.64502802781558 39.0 37.0 39.0 35.0 39.0 10 37.100997931726155 39.0 37.0 39.0 33.0 39.0 11 36.70868383708494 39.0 35.0 39.0 32.0 39.0 12 35.826806410400465 37.0 35.0 39.0 31.0 39.0 13 35.44485574102049 37.0 35.0 39.0 30.0 39.0 14 36.36765544305589 38.0 35.0 40.0 31.0 41.0 15 36.65004973012564 38.0 35.0 40.0 31.0 41.0 16 36.80585899948813 38.0 35.0 40.0 32.0 41.0 17 36.761145166190175 38.0 35.0 40.0 32.0 41.0 18 36.7136897256312 38.0 35.0 40.0 31.0 41.0 19 36.690469710400045 38.0 35.0 40.0 31.0 41.0 20 36.59578271888538 38.0 35.0 40.0 31.0 41.0 21 36.44593440617236 38.0 35.0 40.0 31.0 41.0 22 36.31266724095598 38.0 35.0 40.0 31.0 41.0 23 36.26233078232354 38.0 35.0 40.0 31.0 41.0 24 36.16860010736713 38.0 35.0 40.0 30.0 41.0 25 36.07460892145969 37.0 34.0 40.0 30.0 41.0 26 35.89109227331178 37.0 34.0 40.0 30.0 41.0 27 35.896947943586476 37.0 34.0 40.0 30.0 41.0 28 35.88429859715269 37.0 34.0 40.0 30.0 41.0 29 35.93301331269221 37.0 35.0 40.0 30.0 41.0 30 35.89150551192899 37.0 34.0 40.0 30.0 41.0 31 35.803190634922615 37.0 34.0 40.0 30.0 41.0 32 35.6995409846981 37.0 34.0 40.0 30.0 41.0 33 35.559054836306736 37.0 34.0 40.0 29.0 41.0 34 35.47812956466373 37.0 34.0 40.0 29.0 41.0 35 35.329348681007254 37.0 34.0 40.0 29.0 41.0 36 35.18488453871667 36.0 34.0 40.0 27.0 41.0 37 35.14209082926545 36.0 34.0 40.0 27.0 41.0 38 35.122777229844736 36.0 34.0 40.0 28.0 41.0 39 35.04375127446452 36.0 34.0 40.0 27.0 41.0 40 34.904236424091856 36.0 34.0 40.0 27.0 41.0 41 34.84688656121383 36.0 34.0 40.0 27.0 41.0 42 34.806174858612465 36.0 33.0 40.0 27.0 41.0 43 34.773671747878666 35.0 33.0 40.0 27.0 41.0 44 34.70082065111092 35.0 33.0 40.0 27.0 41.0 45 34.59796002446972 35.0 33.0 40.0 27.0 41.0 46 34.52335651298185 35.0 33.0 40.0 27.0 41.0 47 34.45713804167343 35.0 33.0 39.0 27.0 41.0 48 34.34017153772207 35.0 33.0 39.0 26.0 41.0 49 34.29286216640241 35.0 33.0 39.0 26.0 41.0 50 34.14184113825807 35.0 33.0 39.0 26.0 41.0 51 34.04157396888018 35.0 33.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 3.0 12 4.0 13 4.0 14 21.0 15 45.0 16 135.0 17 430.0 18 933.0 19 1834.0 20 3394.0 21 5398.0 22 8254.0 23 12590.0 24 17540.0 25 24189.0 26 31917.0 27 39133.0 28 47620.0 29 58404.0 30 72421.0 31 90771.0 32 115898.0 33 166259.0 34 245746.0 35 322410.0 36 191221.0 37 245130.0 38 317711.0 39 383332.0 40 221.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.94714457525479 24.97888030229258 30.020308201933442 12.053666920519191 2 28.40264339546478 27.218150871629692 31.252741399185176 13.126464333720357 3 29.86941160314111 25.98409468283 30.083854563311235 14.062639150717654 4 23.118640682155835 38.72507771632605 25.66815232816057 12.488129273357554 5 24.16796714066343 32.6919187505462 28.543968505640937 14.596145603149434 6 23.016766751145457 41.275338435352914 24.836015430904258 10.871879382597369 7 89.51834604676712 4.443293091465978 4.056771412044262 1.9815894497226347 8 91.12489960340746 3.1277544039251426 3.770459056917065 1.9768869357503425 9 87.07320524184655 5.052372688797613 5.095111466227211 2.7793106031286285 10 54.309833248022244 25.60826810155766 9.498828533023715 10.583070117396389 11 47.367923860888816 21.638638851088444 17.42768324198804 13.565754046034698 12 45.78796239653429 20.56480105868987 19.15396363666629 14.493272908109548 13 23.416854975301398 37.32173102452382 20.064919661918378 19.196494338256407 14 15.663283353516691 39.65584256149681 24.338755789710234 20.34211829527626 15 15.80539915188288 24.362393205075385 42.2902075348423 17.54200010819944 16 17.708460779785014 18.74650952779269 43.40216482103397 20.142864871388326 17 17.842836156922477 20.855899158125155 26.02346263165999 35.27780205329238 18 22.835574310124553 25.938775764990822 27.382114633141484 23.843535291743134 19 32.611143709659295 26.347103792390254 20.367253856685686 20.67449864126477 20 35.809227747329345 23.163501833148146 21.697607543997634 19.32966287552487 21 26.338198146460424 28.269100321685247 23.15051790076447 22.24218363108986 22 24.008997199299202 27.055435565154788 21.583998135640478 27.351569099905532 23 24.950082606108275 30.70933053679405 22.046592341976805 22.293994515120872 24 23.470205620544576 23.115602774899397 32.867992525915845 20.546199078640182 25 21.729235071598897 24.898438182748848 29.661335763659135 23.710990981993117 26 21.07633470247236 35.93124341960158 21.992451008543593 20.999970869382473 27 23.22646558217539 32.50935300898472 24.775673437454486 19.48850797138541 28 18.74330515986467 29.27269171067471 33.260090637835674 18.723912491624947 29 19.25533818566191 26.30319979025955 31.800688314877007 22.640773709201532 30 22.14001839390421 29.17314822906653 26.23986150472124 22.44697187230802 31 29.804034174375875 27.291476797463137 21.10421686496294 21.80027216319804 32 32.60714865354124 27.645122494246703 21.62623753105532 18.121491321156736 33 29.603906831962114 28.154741840305952 21.203552270731638 21.037799057000296 34 22.810313903211444 27.036958430608788 25.127030300003746 25.025697366176026 35 23.906540655938276 23.65589249969829 27.61882170813618 24.818745136227253 36 29.367199756967423 26.887518362692838 22.31421948671852 21.43106239362123 37 23.740579366367452 31.581293149727212 25.405602233902215 19.272525250003124 38 23.1444004710837 31.125107679246934 22.299903868962158 23.43058798070721 39 24.166136073275986 30.07977627685739 24.262891338635107 21.491196311231516 40 26.961010749197868 24.86701873098707 24.936432831038257 23.235537688776805 41 18.77826190089764 24.93676575238143 27.30196381977303 28.983008526947902 42 23.274739176935206 26.521263270036666 22.64264639175687 27.561351161271258 43 23.701794029888013 28.1195770234335 23.12883639829045 25.04979254838804 44 22.19415972733742 30.612450425931243 25.44709255629492 21.746297290436416 45 20.181400516860386 33.07111616041815 21.548375551921165 25.1991077708003 46 21.473926016554515 32.88255783467958 22.503027503464462 23.140488645301442 47 23.986941160314114 25.687961148079253 26.072069147762978 24.253028543843662 48 24.50638168599691 21.68741182786302 29.37901846465 24.427188021490075 49 20.712618135057866 25.841479502449054 28.72898954210831 24.716912820384774 50 19.252008972230197 32.122207102044555 24.871097017440917 23.75468690828433 51 19.103734129015344 32.627165549299406 22.89013179523673 25.37896852644852 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 294.0 1 835.0 2 1376.0 3 3564.0 4 5752.0 5 4442.0 6 3132.0 7 3318.0 8 3504.0 9 3806.0 10 4108.0 11 3981.5 12 3855.0 13 3867.5 14 3880.0 15 4081.5 16 4283.0 17 3867.0 18 3451.0 19 3415.5 20 3380.0 21 3738.0 22 4096.0 23 4567.5 24 5039.0 25 6864.5 26 12887.0 27 17084.0 28 22672.5 29 28261.0 30 32471.0 31 36681.0 32 38969.0 33 41257.0 34 48627.5 35 55998.0 36 59204.5 37 62411.0 38 76626.0 39 90841.0 40 124065.5 41 157290.0 42 185979.0 43 214668.0 44 211998.5 45 209329.0 46 197682.5 47 186036.0 48 178856.5 49 171677.0 50 161421.0 51 151165.0 52 142373.5 53 133582.0 54 126906.5 55 120231.0 56 122207.5 57 124184.0 58 131841.5 59 139499.0 60 137876.0 61 136253.0 62 117146.0 63 98039.0 64 78552.5 65 59066.0 66 48232.0 67 37398.0 68 32661.5 69 27925.0 70 24140.5 71 20356.0 72 16432.5 73 12509.0 74 9665.0 75 5631.5 76 4442.0 77 3503.5 78 2565.0 79 1890.0 80 1215.0 81 896.0 82 577.0 83 555.0 84 533.0 85 365.5 86 198.0 87 113.5 88 29.0 89 16.0 90 3.0 91 4.0 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2402970.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.181764097544633 #Duplication Level Percentage of deduplicated Percentage of total 1 78.79590447930885 12.750567381368361 2 8.264397156539221 2.6746505039107267 3 2.7721506869300527 1.3457486537624526 4 1.3580145635539878 0.8790028523384265 5 0.7898255457949834 0.6390385330134428 6 0.529587177822059 0.5141792868360587 7 0.39106546802648273 0.4429690405210299 8 0.2721912227418949 0.35236273246652555 9 0.2259845740800443 0.32911461607026393 >10 3.046686955298225 12.671949226831789 >50 1.700895215551991 20.05670401560177 >100 1.8443153546949147 45.8602196453941 >500 0.007016874732234448 0.7721087990094686 >1k 0.0019647249250256456 0.7113847128756063 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3328 0.13849527875920217 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3170 0.13192008223157176 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2632 0.10953112190331131 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2447 0.10183231584247826 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.047108370058719 0.0 2 0.0 0.0 0.0 0.15002268026650353 0.0 3 0.0 0.0 0.0 0.21261189278268144 0.0 4 0.0 0.0 0.0 0.35518545799573026 0.0 5 4.161516789639488E-5 0.0 0.0 0.6121175045880722 0.0 6 4.161516789639488E-5 0.0 0.0 0.8492823464296266 0.0 7 8.323033579278976E-5 0.0 0.0 0.9888180043862387 0.0 8 8.323033579278976E-5 0.0 0.0 1.3212815807105374 0.0 9 8.323033579278976E-5 0.0 0.0 1.4201592196323716 0.0 10 8.323033579278976E-5 0.0 0.0 1.591572096197622 0.0 11 1.2484550368918463E-4 0.0 0.0 1.8525408140759143 0.0 12 1.2484550368918463E-4 0.0 0.0 2.057453900797763 0.0 13 1.2484550368918463E-4 0.0 0.0 2.1429730708248544 0.0 14 1.2484550368918463E-4 0.0 0.0 2.1772223540035873 0.0 15 1.2484550368918463E-4 0.0 0.0 2.2351090525474726 8.323033579278976E-5 16 1.2484550368918463E-4 0.0 0.0 2.3577073371702517 8.323033579278976E-5 17 1.2484550368918463E-4 0.0 0.0 2.4947877002209764 8.323033579278976E-5 18 1.2484550368918463E-4 0.0 0.0 2.6583769252217047 8.323033579278976E-5 19 1.2484550368918463E-4 0.0 0.0 2.765577597722818 8.323033579278976E-5 20 1.2484550368918463E-4 0.0 0.0 2.867576374236882 8.323033579278976E-5 21 1.6646067158557952E-4 0.0 0.0 3.021136343774579 8.323033579278976E-5 22 1.6646067158557952E-4 0.0 0.0 3.1839348805852756 8.323033579278976E-5 23 1.6646067158557952E-4 0.0 0.0 3.3617148778386747 8.323033579278976E-5 24 1.6646067158557952E-4 0.0 0.0 3.489390212944814 8.323033579278976E-5 25 1.6646067158557952E-4 0.0 0.0 3.6002946353887064 8.323033579278976E-5 26 1.6646067158557952E-4 0.0 0.0 3.708161150576162 8.323033579278976E-5 27 1.6646067158557952E-4 0.0 0.0 3.8060400254684827 8.323033579278976E-5 28 1.6646067158557952E-4 0.0 0.0 3.912117088436393 8.323033579278976E-5 29 1.6646067158557952E-4 0.0 0.0 4.0272246428378216 8.323033579278976E-5 30 1.6646067158557952E-4 0.0 0.0 4.167426143480776 8.323033579278976E-5 31 2.080758394819744E-4 0.0 0.0 4.318322742273104 8.323033579278976E-5 32 2.080758394819744E-4 0.0 0.0 4.450742206519433 8.323033579278976E-5 33 2.080758394819744E-4 0.0 0.0 4.575338019201238 8.323033579278976E-5 34 2.080758394819744E-4 0.0 0.0 4.71337553111358 8.323033579278976E-5 35 2.080758394819744E-4 0.0 0.0 4.887826314935268 8.323033579278976E-5 36 2.4969100737836926E-4 0.0 0.0 5.065814388028149 8.323033579278976E-5 37 2.4969100737836926E-4 0.0 0.0 5.23098498940894 8.323033579278976E-5 38 2.4969100737836926E-4 0.0 0.0 5.3701877260223805 8.323033579278976E-5 39 2.913061752747641E-4 0.0 0.0 5.517963187222479 8.323033579278976E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCTAAG 55 1.8189894E-12 45.000004 25 GATCGAC 35 1.2126657E-7 45.0 10 CGCGATA 20 7.0348254E-4 45.0 11 ACAATCG 25 3.892081E-5 45.0 17 AATCTCG 25 3.892081E-5 45.0 18 CGCGTAA 20 7.0348254E-4 45.0 31 CGATCGG 20 7.0348254E-4 45.0 2 ACCCACG 20 7.0348254E-4 45.0 13 ATCGATC 35 1.2126657E-7 45.0 10 CCGAATT 30 2.1664946E-6 44.999996 24 TACGTAG 60 0.0 44.999996 1 TATAGCG 95 0.0 42.63158 1 CTATATG 85 0.0 42.35294 1 TAATGCG 85 0.0 42.35294 1 ACAACGT 75 0.0 42.000004 19 TGTAACG 70 0.0 41.785713 1 TAGATCG 60 3.6379788E-12 41.249996 1 TCGTTCA 115 0.0 41.086956 16 CGTTAGG 370 0.0 40.135136 2 AACGCGT 45 1.9297659E-8 40.000004 13 >>END_MODULE