##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545299_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3063822 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.271995566322065 31.0 31.0 33.0 30.0 34.0 2 31.580324836103404 31.0 31.0 34.0 30.0 34.0 3 31.668750338629334 31.0 31.0 34.0 30.0 34.0 4 30.283164948877577 35.0 33.0 37.0 0.0 37.0 5 32.83864467322188 35.0 33.0 37.0 19.0 37.0 6 34.46285391253147 35.0 33.0 37.0 30.0 37.0 7 35.48355811793244 36.0 35.0 37.0 33.0 37.0 8 35.671808936681046 37.0 35.0 37.0 35.0 37.0 9 37.69690341018506 39.0 37.0 39.0 35.0 39.0 10 37.159503391515564 39.0 37.0 39.0 33.0 39.0 11 36.68119590498404 39.0 35.0 39.0 32.0 39.0 12 35.39909694492696 35.0 35.0 39.0 31.0 39.0 13 34.86327632610511 35.0 34.0 39.0 30.0 39.0 14 35.64093867071912 36.0 34.0 40.0 29.0 41.0 15 36.04015344233444 36.0 35.0 40.0 31.0 41.0 16 36.25736416802282 36.0 35.0 40.0 32.0 41.0 17 36.211649371275485 36.0 35.0 40.0 31.0 41.0 18 36.2002188769452 36.0 35.0 40.0 31.0 41.0 19 36.18049449347906 36.0 35.0 40.0 31.0 41.0 20 36.03557811126103 36.0 34.0 40.0 31.0 41.0 21 35.83059981944121 36.0 34.0 40.0 30.0 41.0 22 35.69525285737879 35.0 34.0 40.0 30.0 41.0 23 35.69313948395175 35.0 34.0 40.0 30.0 41.0 24 35.6213507181553 35.0 34.0 40.0 30.0 41.0 25 35.4945479861428 35.0 34.0 40.0 30.0 41.0 26 35.32556591081336 35.0 34.0 40.0 30.0 41.0 27 35.31272280178157 35.0 34.0 40.0 29.0 41.0 28 35.39162131481529 36.0 34.0 40.0 30.0 41.0 29 35.47645457209982 36.0 34.0 40.0 30.0 41.0 30 35.451759926000925 36.0 34.0 40.0 30.0 41.0 31 35.30225319878244 35.0 34.0 40.0 30.0 41.0 32 35.17172733925143 35.0 34.0 40.0 29.0 41.0 33 35.01298313022101 35.0 34.0 40.0 29.0 41.0 34 34.9633918027875 35.0 34.0 40.0 29.0 41.0 35 34.85988415776112 35.0 34.0 40.0 29.0 41.0 36 34.64392383108418 35.0 33.0 40.0 27.0 41.0 37 34.58323329488462 35.0 33.0 40.0 27.0 41.0 38 34.614557242555215 35.0 33.0 40.0 27.0 41.0 39 34.57248528145565 35.0 33.0 40.0 27.0 41.0 40 34.432550259120795 35.0 33.0 39.0 26.0 41.0 41 34.43640263696781 35.0 33.0 39.0 27.0 41.0 42 34.3672324958826 35.0 33.0 39.0 27.0 41.0 43 34.29435489398536 35.0 33.0 39.0 27.0 41.0 44 34.2595842708878 35.0 33.0 39.0 27.0 41.0 45 34.14735353424579 35.0 33.0 39.0 26.0 41.0 46 34.10116710435528 35.0 33.0 39.0 26.0 41.0 47 34.041718154644755 35.0 33.0 39.0 26.0 41.0 48 33.98676718164437 35.0 33.0 39.0 26.0 41.0 49 33.9817277243913 35.0 33.0 38.0 26.0 40.0 50 33.78362417921146 35.0 33.0 38.0 26.0 40.0 51 33.71921932801579 35.0 33.0 38.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 3.0 12 3.0 13 8.0 14 20.0 15 57.0 16 212.0 17 592.0 18 1338.0 19 2691.0 20 4868.0 21 8003.0 22 12397.0 23 17925.0 24 25055.0 25 34430.0 26 44667.0 27 55143.0 28 66206.0 29 80231.0 30 99040.0 31 124923.0 32 160694.0 33 237885.0 34 366478.0 35 508630.0 36 211679.0 37 256289.0 38 332478.0 39 411564.0 40 310.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.20206656914142 24.954582870675907 31.0322858181709 11.811064742011775 2 27.714110023362977 27.054737514124515 31.986518799068612 13.244633663443894 3 29.05720371483722 25.910447800165937 31.282528815316297 13.74981966968055 4 22.892648463259288 39.089411852255125 25.446517454342978 12.571422230142613 5 24.389504351101337 32.974174087136916 28.772591880337693 13.86372968142405 6 22.076413055327627 41.56494731090775 25.62870819518889 10.72993143857574 7 89.24105251545292 4.820939336554146 4.115154209350282 1.8228539386426497 8 91.78379161713703 2.8094647796118704 3.5455062337172327 1.8612373695338698 9 88.5528597940742 4.4042049440209 4.635843727213917 2.407091534690984 10 62.74705253764742 19.906737401846453 8.465929156458827 8.880280904047298 11 56.12281000658654 17.74607010459485 14.674677575916617 11.45644231290199 12 50.66776072500295 20.713931814576693 16.295333083971588 12.322974376448762 13 21.410741224522834 46.12046652840798 17.929142097680607 14.539650149388574 14 13.314905369828924 47.48076095804522 23.855628688611805 15.348704983514056 15 13.43694248556215 23.13434004978096 51.11759103498833 12.311126429668565 16 15.040658367228907 16.49573637110772 49.73728891560933 18.726316346054045 17 16.26514203501378 17.471282600621056 25.802935026904304 40.46064033746086 18 22.456493882477506 24.480338609749523 31.462891773738814 21.600275734034156 19 34.83985035684188 24.36864804809157 20.59865096601565 20.192850629050906 20 38.1353094272448 23.350997544896536 20.076982278996624 18.436710748862044 21 24.741026077885724 30.06653128021145 23.174551263095573 22.017891378807256 22 23.639069110411768 26.303159909420327 21.235208833933562 28.822562146234343 23 23.02375921316578 32.967678931739506 21.028538864202947 22.98002299089177 24 22.346304713524482 23.348484344064374 37.35034215434187 16.95486878806928 25 18.45260592815118 25.08060194097438 34.933458928097 21.533333202777445 26 17.471837463142442 39.72228151635441 22.573667791405637 20.23221322909751 27 19.19794948923273 37.203793170752085 25.913940170153488 17.684317169861696 28 15.524792236624712 29.076101679536215 39.12482513670834 16.27428094713074 29 16.110890254068284 24.94025436203539 37.567685067866215 21.38117031603011 30 20.272652915215048 32.07399124361663 27.76146917151192 19.891886669656397 31 33.07708476536823 26.520470183972826 19.661063860759533 20.741381189899414 32 36.320419397732636 26.670935844184157 21.184781622431068 15.823863135652136 33 30.831164473654148 28.18943137036029 21.014014521731355 19.965389634254212 34 19.82840386941539 27.402734231949506 26.133502533763387 26.635359364871718 35 21.76134906009553 24.13603009574316 29.85013489687064 24.252485947290673 36 33.563144334102965 23.799718129839135 23.349789902938227 19.28734763311968 37 21.940537015531582 33.90660423484132 26.320621759358083 17.832236990269017 38 21.18794760270016 35.02370568525195 21.251234569110085 22.537112142937808 39 22.456428604533816 32.072718323714625 24.733943420995082 20.736909650756473 40 26.90006142654501 24.771053931984298 22.919347142229544 25.409537499241143 41 16.893050575392436 23.596834280842685 25.7893898535881 33.72072529017678 42 22.506300953514923 25.457516787855166 21.74711846837055 30.28906379025936 43 22.45427443239196 26.992854023503977 23.590175930586046 26.96269561351802 44 21.001415878598692 31.643515843936104 26.38031843886492 20.974749838600285 45 18.295710390486132 37.832582963370584 19.795112118132188 24.076594528011093 46 21.284395764505902 35.23585900225274 21.74065595194499 21.739089281296366 47 21.85326040481464 25.941585379307284 27.09674387089067 25.1084103449874 48 24.44655727388863 20.290016848237265 31.595797667096846 23.66762821077726 49 19.831765683515556 23.088906600970944 32.2731542498226 24.806173465690893 50 18.133723173213063 35.31944740915105 24.786067859033587 21.760761558602297 51 17.741761760311142 35.705207417402185 21.449451045132516 25.103579777154156 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 443.0 1 945.0 2 1447.0 3 3888.5 4 6330.0 5 4928.5 6 3527.0 7 3891.5 8 4256.0 9 4726.0 10 5196.0 11 5272.5 12 5349.0 13 5465.5 14 5582.0 15 5470.0 16 5358.0 17 5166.5 18 4975.0 19 4611.5 20 4248.0 21 4447.0 22 4646.0 23 6087.0 24 7528.0 25 9460.5 26 14942.0 27 18491.0 28 23748.5 29 29006.0 30 35134.5 31 41263.0 32 45136.0 33 49009.0 34 55257.5 35 61506.0 36 64064.5 37 66623.0 38 95154.5 39 123686.0 40 189472.5 41 255259.0 42 304505.0 43 353751.0 44 341174.5 45 328598.0 46 297941.5 47 267285.0 48 247852.0 49 228419.0 50 221635.0 51 214851.0 52 194907.0 53 174963.0 54 159320.5 55 143678.0 56 135685.0 57 127692.0 58 129536.5 59 131381.0 60 126805.5 61 122230.0 62 108157.5 63 94085.0 64 78295.0 65 62505.0 66 48435.5 67 34366.0 68 28880.5 69 23395.0 70 20102.5 71 16810.0 72 14427.5 73 12045.0 74 9485.5 75 5092.5 76 3259.0 77 2386.0 78 1513.0 79 1045.0 80 577.0 81 339.5 82 102.0 83 149.0 84 196.0 85 124.5 86 53.0 87 35.5 88 18.0 89 9.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3063822.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.019422543244223 #Duplication Level Percentage of deduplicated Percentage of total 1 77.70813642384307 10.894231995739231 2 9.833371077060875 2.757163683076659 3 3.5192505700082712 1.4801358232949713 4 1.770253086924171 0.992717041362896 5 1.0148582850492365 0.711386355980872 6 0.6245783705416833 0.5253736852796891 7 0.42868660694047167 0.42069570769296866 8 0.3152009965167249 0.35351487649756935 9 0.22284092855302007 0.28116910235823167 >10 1.7889623009194766 5.714461808771009 >50 0.7310587108092931 7.5744814922685295 >100 1.9791229958874061 61.73566997773228 >500 0.057109524642414713 5.04773248322635 >1k 0.006570122303994613 1.5112659667187396 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3415 0.11146208885503141 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3124 0.10196414804776517 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0633196053817748 0.0 2 0.0 0.0 0.0 0.1993262010652055 0.0 3 3.2638971846275664E-5 0.0 0.0 0.2863417000073764 0.0 4 3.2638971846275664E-5 0.0 0.0 0.48948666077859615 0.0 5 3.2638971846275664E-5 0.0 0.0 0.8058562148845462 0.0 6 3.2638971846275664E-5 0.0 0.0 1.1293410648529842 0.0 7 3.2638971846275664E-5 0.0 0.0 1.307615129077342 0.0 8 6.527794369255133E-5 0.0 0.0 1.745956520972824 0.0 9 6.527794369255133E-5 0.0 0.0 1.8635547365349554 0.0 10 6.527794369255133E-5 0.0 0.0 2.049498959143188 0.0 11 6.527794369255133E-5 0.0 0.0 2.360515721866349 0.0 12 6.527794369255133E-5 0.0 0.0 2.6049816209949532 0.0 13 9.791691553882699E-5 0.0 0.0 2.705248542506712 0.0 14 9.791691553882699E-5 0.0 0.0 2.7451986440465537 0.0 15 9.791691553882699E-5 0.0 0.0 2.806788383920476 0.0 16 9.791691553882699E-5 0.0 0.0 2.9510852784528607 0.0 17 9.791691553882699E-5 0.0 0.0 3.1071322028499044 0.0 18 9.791691553882699E-5 0.0 0.0 3.307013266436497 0.0 19 9.791691553882699E-5 0.0 0.0 3.4262107916190954 0.0 20 1.3055588738510265E-4 0.0 0.0 3.5392069121509016 0.0 21 1.3055588738510265E-4 0.0 0.0 3.7096149841603068 0.0 22 1.3055588738510265E-4 0.0 0.0 3.8766286030976995 0.0 23 1.3055588738510265E-4 0.0 0.0 4.0663589464401 0.0 24 1.3055588738510265E-4 0.0 0.0 4.203638462025536 0.0 25 1.3055588738510265E-4 0.0 0.0 4.316406109754418 0.0 26 1.3055588738510265E-4 0.0 0.0 4.417978590140028 0.0 27 1.3055588738510265E-4 0.0 0.0 4.51602606156624 0.0 28 1.6319485923137832E-4 0.0 0.0 4.62618259154742 0.0 29 1.6319485923137832E-4 0.0 0.0 4.73940718488215 0.0 30 1.6319485923137832E-4 0.0 0.0 4.896531195350121 0.0 31 1.9583383107765398E-4 0.0 0.0 5.0531329822685525 0.0 32 1.9583383107765398E-4 0.0 0.0 5.192142363361841 0.0 33 1.9583383107765398E-4 0.0 0.0 5.324134365508179 0.0 34 1.9583383107765398E-4 0.0 0.0 5.464122915756855 0.0 35 1.9583383107765398E-4 0.0 0.0 5.659010216650968 0.0 36 1.9583383107765398E-4 0.0 0.0 5.818973817669565 0.0 37 1.9583383107765398E-4 0.0 0.0 5.983604791662179 0.0 38 2.611117747702053E-4 0.0 0.0 6.1144217908220515 0.0 39 2.93750746616481E-4 0.0 0.0 6.261003413383675 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGGTC 30 2.166691E-6 45.000004 26 CGAAACG 30 2.166691E-6 45.000004 24 TACCGTA 30 2.166691E-6 45.000004 45 TACCGGA 30 2.166691E-6 45.000004 31 AAATGCG 110 0.0 45.000004 1 CGGACGT 30 2.166691E-6 45.000004 26 AACGTCC 45 3.8562575E-10 45.0 33 TCGTTAC 35 1.2128112E-7 45.0 42 CGTATTA 25 3.8923332E-5 45.0 31 GTCGAAT 35 1.2128112E-7 45.0 11 GTCGAAC 20 7.03513E-4 45.0 14 CGACGGA 25 3.8923332E-5 45.0 31 TCCGATC 40 6.8212103E-9 45.0 19 CGTGCAA 25 3.8923332E-5 45.0 29 ACCGCGA 20 7.03513E-4 45.0 37 TATATCG 35 1.2128112E-7 45.0 1 ACCTATC 20 7.03513E-4 45.0 24 GCCGAAT 20 7.03513E-4 45.0 14 GTACTCG 35 1.2128112E-7 45.0 33 CATACGT 35 1.2128112E-7 45.0 10 >>END_MODULE