##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545298_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2155034 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.290455278199786 31.0 31.0 33.0 30.0 34.0 2 31.61606731030694 31.0 31.0 34.0 30.0 34.0 3 31.714607286938396 31.0 31.0 34.0 30.0 34.0 4 30.31161318104494 35.0 33.0 37.0 0.0 37.0 5 32.871547734281684 35.0 33.0 37.0 19.0 37.0 6 34.5103594653263 35.0 33.0 37.0 30.0 37.0 7 35.4844239116413 36.0 35.0 37.0 33.0 37.0 8 35.67988904119378 37.0 35.0 37.0 35.0 37.0 9 37.72182387841677 39.0 37.0 39.0 35.0 39.0 10 37.17002562372566 39.0 37.0 39.0 33.0 39.0 11 36.72014548262348 39.0 35.0 39.0 32.0 39.0 12 35.469843631237374 37.0 35.0 39.0 31.0 39.0 13 34.95037340478155 36.0 34.0 39.0 30.0 39.0 14 35.763078911980045 37.0 34.0 40.0 30.0 41.0 15 36.117894659666625 37.0 35.0 40.0 31.0 41.0 16 36.34602934338855 37.0 35.0 40.0 32.0 41.0 17 36.29676329932614 37.0 35.0 40.0 31.0 41.0 18 36.26434988960731 36.0 35.0 40.0 31.0 41.0 19 36.26341208537777 37.0 35.0 40.0 31.0 41.0 20 36.12237022710546 36.0 35.0 40.0 31.0 41.0 21 35.93616202807009 36.0 34.0 40.0 31.0 41.0 22 35.81198672503543 36.0 34.0 40.0 30.0 41.0 23 35.77107043322751 36.0 34.0 40.0 30.0 41.0 24 35.693660517653086 35.0 34.0 40.0 30.0 41.0 25 35.54417656519572 35.0 34.0 40.0 30.0 41.0 26 35.37861258801485 35.0 34.0 40.0 30.0 41.0 27 35.35741477860674 35.0 34.0 40.0 29.0 41.0 28 35.398172836252236 36.0 34.0 40.0 29.0 41.0 29 35.49452352027857 36.0 34.0 40.0 30.0 41.0 30 35.44361620280701 36.0 34.0 40.0 30.0 41.0 31 35.333258315182036 35.0 34.0 40.0 30.0 41.0 32 35.18908425574724 35.0 34.0 40.0 29.0 41.0 33 35.0478841633125 35.0 34.0 40.0 29.0 41.0 34 35.0108118943831 35.0 34.0 40.0 29.0 41.0 35 34.8926216477327 35.0 34.0 40.0 28.0 41.0 36 34.696414534527065 35.0 33.0 40.0 27.0 41.0 37 34.638227517524086 35.0 33.0 40.0 27.0 41.0 38 34.63289024674321 35.0 33.0 40.0 27.0 41.0 39 34.61637681818477 35.0 33.0 40.0 27.0 41.0 40 34.4898164019686 35.0 33.0 40.0 27.0 41.0 41 34.48644986575618 35.0 33.0 39.0 27.0 41.0 42 34.43606736599051 35.0 33.0 39.0 27.0 41.0 43 34.35961427986751 35.0 33.0 39.0 27.0 41.0 44 34.298406428854484 35.0 33.0 39.0 27.0 41.0 45 34.214588725746324 35.0 33.0 39.0 27.0 41.0 46 34.16517929647514 35.0 33.0 39.0 27.0 41.0 47 34.09005426364503 35.0 33.0 39.0 26.0 41.0 48 34.02016302294999 35.0 33.0 39.0 26.0 41.0 49 33.99032776281024 35.0 33.0 39.0 26.0 40.0 50 33.81627575249393 35.0 33.0 38.0 26.0 40.0 51 33.73527842252141 35.0 33.0 38.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 1.0 12 4.0 13 2.0 14 11.0 15 41.0 16 135.0 17 385.0 18 921.0 19 1894.0 20 3402.0 21 5300.0 22 8226.0 23 12330.0 24 17617.0 25 23938.0 26 31044.0 27 37997.0 28 45824.0 29 56031.0 30 68638.0 31 86790.0 32 111417.0 33 165474.0 34 254172.0 35 350456.0 36 154017.0 37 187062.0 38 239801.0 39 291859.0 40 242.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.918289920251837 24.873528677505785 30.816079931917546 12.39210147032483 2 27.551212649081176 26.75776809089787 31.815878542983544 13.875140717037409 3 28.858152585991682 26.432761617682132 30.617289564805013 14.091796231521172 4 22.910821824620864 38.548394132064736 26.025668272519138 12.515115770795262 5 23.830575294867735 32.345104531993464 29.503942861226317 14.32037731191248 6 22.11403625186424 41.783702716523266 25.076541715815154 11.025719315797337 7 90.31398112512377 4.212972973976281 3.881191665653535 1.5918542352464045 8 92.37956338507884 2.6141582917021267 3.277813714307988 1.7284646089110427 9 89.06657621179063 4.185502409706761 4.393573372856299 2.3543480056463144 10 61.90338528301642 20.5485853123431 8.139546754250745 9.40848265038974 11 55.06785507792452 18.49901208055186 14.218105143584742 12.215027697938872 12 49.39379146686317 20.50116146659403 17.122374867403483 12.982672199139317 13 22.004200397766347 43.8456655440239 18.611260889619373 15.538873168590381 14 14.682320557355474 45.33529401392275 23.478887108045626 16.503498320676147 15 14.520652574390938 22.78052225626139 48.761179638001074 13.937645531346604 16 16.22229626075505 16.908967561532673 47.64699768077905 19.221738496933227 17 17.361211006415676 18.838125059743838 25.009489409447834 38.79117452439265 18 22.90223727328664 25.372175102573784 30.20096202658519 21.52462559755438 19 34.102710212460686 25.321549451191956 19.972306701425595 20.60343363492177 20 37.227858121960026 23.727792693757966 20.481347394055035 18.563001790226977 21 25.270227755107342 29.175456164496712 23.401765354978156 22.15255072541779 22 24.84647574005793 25.64785520785287 21.354837093057462 28.150831959031734 23 24.182217078709662 31.194449832346034 20.866352920649973 23.756980168294326 24 23.324411587009763 22.612033035209652 35.32463988967228 18.738915488108308 25 19.676209284865113 25.09849032544266 33.0911252444277 22.13417514526453 26 18.852509983601188 37.859866712079715 22.330227736546153 20.957395567772945 27 20.736146158250868 35.13318119342897 26.096107996439965 18.034564651880203 28 16.022949057880293 29.176801850922075 37.88710526144831 16.913143829749323 29 17.460466981031388 24.982761292861273 35.72741775767807 21.82935396842927 30 20.99419313105965 31.900424772880616 26.876838138052577 20.228543958007158 31 32.9268586945728 26.86616545261003 19.751150097863885 20.455825754953285 32 34.95805634621078 26.982915350755487 21.043426693035933 17.0156016099978 33 29.975211527985174 30.04110375984787 20.499398153347002 19.484286558819957 34 21.017533830092706 28.103454516262854 24.841742636079058 26.037269017565386 35 22.398486520398286 24.04667397358928 28.734488643798663 24.820350862213775 36 32.514521812648894 25.420062978124708 22.940426925978894 19.124988283247504 37 22.843630309312985 32.969874257204296 25.69657833704712 18.4899170964356 38 21.8354327588335 33.48230236738725 20.98700066913097 23.69526420464828 39 22.882980036509863 32.31730914686265 24.34249297226865 20.457217844358837 40 26.44092854219469 25.07352552210313 23.19155985474011 25.293986080962068 41 17.3308170543945 23.57099702371285 26.085806534838895 33.012379387053755 42 23.459351453387743 25.085126267149384 21.9505121496923 29.505010129770575 43 23.30459751447077 26.712525185217494 23.89261607937508 26.090261220936657 44 20.928718526018613 30.755848863637418 25.913929896233658 22.40150271411031 45 18.792789348103092 36.953662912046866 19.760801917742366 24.49274582210768 46 22.291806068952972 34.430918491309185 22.239973940086326 21.037301499651516 47 22.82799250499064 25.42052700792656 26.458190450823516 25.293290036259286 48 24.690236905775038 20.599860605447525 30.20852571235535 24.50137677642209 49 20.81684094079258 22.907852033889025 31.575557508605435 24.699749516712963 50 18.979190119506235 32.97553542078687 25.016913886277433 23.028360573429467 51 18.0020825657507 35.14269380436689 21.34003454237845 25.515189087503952 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 202.0 1 590.0 2 978.0 3 2855.0 4 4732.0 5 3632.5 6 2533.0 7 2766.5 8 3000.0 9 3225.0 10 3450.0 11 3500.0 12 3550.0 13 3527.0 14 3504.0 15 3541.5 16 3579.0 17 3530.0 18 3481.0 19 3228.5 20 2976.0 21 3158.0 22 3340.0 23 3786.5 24 4233.0 25 5207.0 26 8417.5 27 10654.0 28 15409.5 29 20165.0 30 23515.0 31 26865.0 32 29930.5 33 32996.0 34 36994.0 35 40992.0 36 42479.5 37 43967.0 38 63443.5 39 82920.0 40 122991.5 41 163063.0 42 193856.0 43 224649.0 44 229200.5 45 233752.0 46 211048.0 47 188344.0 48 176186.0 49 164028.0 50 147456.0 51 130884.0 52 127129.0 53 123374.0 54 114476.0 55 105578.0 56 105420.0 57 105262.0 58 104666.5 59 104071.0 60 101647.0 61 99223.0 62 87106.5 63 74990.0 64 61023.0 65 47056.0 66 39983.0 67 32910.0 68 26513.5 69 20117.0 70 17397.0 71 14677.0 72 11703.5 73 8730.0 74 6642.0 75 3831.5 76 3109.0 77 2244.0 78 1379.0 79 1059.0 80 739.0 81 444.5 82 150.0 83 102.0 84 54.0 85 40.5 86 27.0 87 18.5 88 10.0 89 7.0 90 4.0 91 2.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2155034.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.541951565311688 #Duplication Level Percentage of deduplicated Percentage of total 1 78.76461386235832 12.241558137092504 2 9.017334122647437 2.8029394036483763 3 3.1014352720256233 1.4460707034231453 4 1.4449965137515413 0.8983226331508279 5 0.763841641307475 0.5935794896384479 6 0.4841206750274758 0.45145080498258167 7 0.34463221493370866 0.3749380034642051 8 0.2553288587530032 0.31746470047723874 9 0.19689740124919666 0.275415288619568 >10 2.3478811381020375 9.081601646480882 >50 1.2636515042876673 14.357202460168278 >100 1.9980144711882413 54.946535250130935 >500 0.014973715489517037 1.5370700342141808 >1k 0.002278608878839549 0.675851444508829 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2944 0.13661037366463824 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2275 0.10556677992087364 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2207 0.10241137726829369 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04955838283757936 0.0 2 0.0 0.0 0.0 0.17507844423800273 0.0 3 0.0 0.0 0.0 0.2486271678312268 0.0 4 0.0 0.0 0.0 0.42305597034663955 0.0 5 0.0 0.0 0.0 0.7210095061145207 0.0 6 0.0 0.0 0.0 1.0025363868969122 0.0 7 0.0 0.0 0.0 1.1654108473462599 0.0 8 0.0 0.0 0.0 1.5626667607100397 0.0 9 0.0 0.0 0.0 1.6742659280549634 0.0 10 0.0 0.0 0.0 1.8749588173550857 0.0 11 0.0 0.0 0.0 2.171195442856122 0.0 12 0.0 0.0 0.0 2.4157391484310686 0.0 13 4.6402980184999404E-5 0.0 0.0 2.5161551975514076 0.0 14 9.280596036999881E-5 0.0 0.0 2.548126850898872 0.0 15 9.280596036999881E-5 0.0 0.0 2.6068730238130815 0.0 16 9.280596036999881E-5 0.0 0.0 2.7415808752901345 0.0 17 1.8561192073999761E-4 0.0 0.0 2.8982837393748775 0.0 18 1.8561192073999761E-4 0.0 0.0 3.0899280475389252 0.0 19 1.8561192073999761E-4 0.0 0.0 3.208023632109749 0.0 20 1.8561192073999761E-4 0.0 0.0 3.3225925901865123 0.0 21 1.8561192073999761E-4 0.0 0.0 3.4917314529608348 0.0 22 1.8561192073999761E-4 0.0 0.0 3.6651393899121776 0.0 23 1.8561192073999761E-4 0.0 0.0 3.8550667878093803 0.0 24 1.8561192073999761E-4 0.0 0.0 3.9942757283643786 0.0 25 1.8561192073999761E-4 0.0 0.0 4.114598655984082 0.0 26 1.8561192073999761E-4 0.0 0.0 4.2235064504782756 0.0 27 1.8561192073999761E-4 0.0 0.0 4.324247320459909 0.0 28 1.8561192073999761E-4 0.0 0.0 4.435289652042613 0.0 29 1.8561192073999761E-4 0.0 0.0 4.547770476011052 0.0 30 1.8561192073999761E-4 0.0 0.0 4.700482683799884 0.0 31 2.3201490092499702E-4 0.0 0.0 4.866419740941442 0.0 32 2.3201490092499702E-4 0.0 0.0 5.00293730864571 0.0 33 2.3201490092499702E-4 0.0 0.0 5.138480413766094 0.0 34 2.3201490092499702E-4 0.0 0.0 5.284324980487547 0.0 35 2.3201490092499702E-4 0.0 0.0 5.471282587652909 0.0 36 2.3201490092499702E-4 0.0 0.0 5.647521106395537 0.0 37 2.3201490092499702E-4 0.0 0.0 5.81155564134951 0.0 38 2.3201490092499702E-4 0.0 0.0 5.966216774306113 0.0 39 2.3201490092499702E-4 0.0 0.0 6.122269996668266 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTGCC 30 2.166389E-6 45.000004 18 CCGTGAT 30 2.166389E-6 45.000004 30 ATTAACG 60 0.0 45.000004 1 CATACGT 30 2.166389E-6 45.000004 37 CTTTCGT 45 3.8562575E-10 45.000004 22 ACGTAAG 135 0.0 45.000004 1 CGACTTA 30 2.166389E-6 45.000004 32 TAGTCGA 45 3.8562575E-10 45.000004 21 TCGTTAC 25 3.891947E-5 45.0 26 ACGCCTA 40 6.8193913E-9 45.0 1 CGTATCG 40 6.8193913E-9 45.0 40 CGAGTCA 25 3.891947E-5 45.0 45 GCGAATC 20 7.034663E-4 45.0 12 GACGTAA 25 3.891947E-5 45.0 27 ATTACGT 25 3.891947E-5 45.0 12 TAAACCG 25 3.891947E-5 45.0 32 GTAGGTT 25 3.891947E-5 45.0 32 CGCGATA 25 3.891947E-5 45.0 11 TCTAGAT 25 3.891947E-5 45.0 44 TACGATG 20 7.034663E-4 45.0 16 >>END_MODULE