##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545296_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2585521 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2781257626606 31.0 31.0 33.0 30.0 34.0 2 31.592225319384372 31.0 31.0 34.0 30.0 34.0 3 31.687341158706506 31.0 31.0 34.0 30.0 34.0 4 30.281088028292945 35.0 33.0 37.0 0.0 37.0 5 32.8363161621971 35.0 33.0 37.0 19.0 37.0 6 34.45730860433932 35.0 33.0 37.0 30.0 37.0 7 35.481759769114234 36.0 35.0 37.0 33.0 37.0 8 35.69760369380098 37.0 35.0 37.0 35.0 37.0 9 37.76666366275888 39.0 37.0 39.0 35.0 39.0 10 37.20359300891387 39.0 37.0 39.0 33.0 39.0 11 36.69583267743716 39.0 35.0 39.0 32.0 39.0 12 35.223079990454536 35.0 35.0 39.0 31.0 39.0 13 34.60957462731883 35.0 33.0 39.0 27.0 39.0 14 35.34279744778712 35.0 33.0 40.0 27.0 41.0 15 35.830413676779266 36.0 34.0 40.0 30.0 41.0 16 36.09920592406714 35.0 34.0 40.0 32.0 41.0 17 36.04114915330411 35.0 34.0 40.0 31.0 41.0 18 36.0499079295817 36.0 35.0 40.0 31.0 41.0 19 36.00395548904844 36.0 35.0 40.0 31.0 41.0 20 35.8746399661809 36.0 34.0 40.0 31.0 41.0 21 35.69070063635144 35.0 34.0 40.0 31.0 41.0 22 35.527436443177216 35.0 34.0 40.0 30.0 41.0 23 35.53046213896542 35.0 34.0 40.0 30.0 41.0 24 35.46077057583365 35.0 34.0 40.0 30.0 41.0 25 35.313838100715486 35.0 34.0 40.0 30.0 41.0 26 35.15979100537184 35.0 34.0 40.0 29.0 41.0 27 35.12589764306691 35.0 34.0 40.0 29.0 41.0 28 35.22916928541675 35.0 34.0 40.0 29.0 41.0 29 35.3352105823159 36.0 34.0 40.0 30.0 41.0 30 35.29963245318835 36.0 34.0 40.0 30.0 41.0 31 35.109718698861855 35.0 34.0 40.0 29.0 41.0 32 34.97839197593058 35.0 34.0 40.0 29.0 41.0 33 34.812542230366724 35.0 34.0 40.0 29.0 41.0 34 34.78079891828378 35.0 34.0 40.0 29.0 41.0 35 34.644183899492596 35.0 33.0 40.0 28.0 41.0 36 34.40745791660559 35.0 33.0 39.0 26.0 41.0 37 34.31955841781985 35.0 33.0 39.0 26.0 41.0 38 34.36566247189638 35.0 33.0 39.0 27.0 41.0 39 34.35181922714996 35.0 33.0 39.0 27.0 41.0 40 34.25399987081907 35.0 33.0 39.0 26.0 41.0 41 34.294317470250675 35.0 33.0 39.0 26.0 41.0 42 34.239776818676006 35.0 33.0 39.0 27.0 41.0 43 34.14182557403324 35.0 33.0 39.0 27.0 41.0 44 34.096655567678624 35.0 33.0 39.0 27.0 41.0 45 33.99309694255046 35.0 33.0 39.0 26.0 41.0 46 33.89305366307216 35.0 33.0 38.0 26.0 41.0 47 33.82535821600366 35.0 33.0 38.0 26.0 40.0 48 33.82887665580748 35.0 33.0 38.0 26.0 40.0 49 33.84094346942067 35.0 33.0 38.0 26.0 40.0 50 33.64520264967873 35.0 33.0 38.0 24.0 40.0 51 33.57724845398664 35.0 33.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 0.0 13 2.0 14 10.0 15 39.0 16 160.0 17 497.0 18 1140.0 19 2232.0 20 4153.0 21 6783.0 22 10490.0 23 15692.0 24 22137.0 25 30218.0 26 38989.0 27 47818.0 28 57361.0 29 69454.0 30 85415.0 31 107668.0 32 139686.0 33 210788.0 34 326849.0 35 463447.0 36 165039.0 37 195982.0 38 257700.0 39 325563.0 40 207.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.901895594737 25.115247565190923 31.413784687883023 12.569072152189056 2 26.214832523116232 27.419541361296236 32.54833358537796 13.81729253020958 3 27.48301019407694 26.768686079130667 31.719022974479806 14.029280752312589 4 22.024381159541925 38.07008336037495 26.7965721415529 13.108963338530222 5 23.367398679028327 32.13611492615995 30.07711018398226 14.419376210829462 6 21.643954932100726 40.948226682359184 26.628482228533436 10.779336157006654 7 89.9562989432304 4.086565144897295 4.10161046845104 1.855525443421268 8 93.04240808719017 1.9855959398511944 3.2194671789554214 1.7525287940032201 9 90.47569135969114 3.311595612644415 4.2872597051039225 1.9254533225605206 10 64.9264113499755 20.045901773762427 6.802072000188743 8.225614876073333 11 58.238552307252576 15.873396503064566 14.025722475276742 11.862328714406111 12 50.21633937608706 20.696911763625202 16.95016207565129 12.136586784636442 13 18.062201003202063 50.17789451333019 20.142168638351805 11.617735845115936 14 11.227176263507433 50.01251198501192 25.67761004455195 13.0827017069287 15 10.012140686538611 19.82695170528493 57.632755641899635 12.528151966276816 16 13.687183356855352 14.298974945475207 53.102798236796374 18.91104346087307 17 14.403093225698033 16.883096288910437 25.219443199262354 43.494367286129176 18 21.474317942109153 22.10858082374887 35.25289487109175 21.164206363050234 19 31.922308888614715 22.068704914792804 24.39755855783032 21.61142763876217 20 34.371989243173815 22.91897841866301 21.651767670809868 21.057264667353312 21 21.79966822934333 29.161201939570404 27.16272658392641 21.876403247159857 22 24.849575772155784 24.656732627582603 21.98806352762171 28.505628072639905 23 20.510179573091843 33.48404441503279 20.884456169568917 25.121319842306445 24 20.04153128131622 22.19564258035421 40.18304241195489 17.579783726374686 25 14.558883876789244 25.96880860762686 37.64912371626454 21.823183799319363 26 15.69675898977421 39.96900431286383 23.88806743399106 20.4461692633709 27 17.256057869961218 38.452482110955586 27.010803625265467 17.280656393817726 28 13.18616247943838 28.98700107251111 41.507572361624604 16.319264086425907 29 13.14253490882495 23.25763356785731 41.33573078694778 22.26410073636996 30 17.80376179501153 31.848822732439615 30.41475973314469 19.93265573940417 31 33.03009335449219 27.627932629439094 20.65823483932252 18.683739176746194 32 36.89144276917495 25.91203088275052 21.953370326522197 15.243156021552329 33 31.78295593035214 27.66761515377365 21.23015051898631 19.319278396887903 34 19.321366950800247 28.567433797675594 26.52192730207954 25.58927194944462 35 19.69525677803429 25.42632606735741 31.555342230830846 23.32307492377745 36 36.62372109915177 22.699602904018185 23.423170803872797 17.253505192957242 37 20.743517457409936 34.38668647440883 27.033390949058234 17.836405119122993 38 19.49405941781173 36.511093895582356 21.020134820022733 22.974711866583174 39 19.295337380744538 35.75302617924975 24.91246445107195 20.039171988933756 40 24.61793967250701 25.731796415500007 20.970705710763905 28.679558201229078 41 15.248570790954705 21.877989001056267 25.813675464248792 37.05976474374024 42 21.432198771543533 25.129712734880126 21.51059689710507 31.927491596471274 43 21.053977128787583 27.098368181886745 24.667523489463054 27.18013119986262 44 19.887094322575606 31.974058613331703 27.206160769918323 20.932686294174367 45 17.210921899299986 40.282326076639876 19.103925282370554 23.402826741689587 46 22.96856223561905 34.08674692644152 23.623014471744767 19.321676366194666 47 22.13406891686434 25.283492185907598 26.233281416008612 26.349157481219454 48 24.494831022451567 20.038978604312245 31.217770035517017 24.248420337719168 49 20.20749396349904 21.30839393685064 34.124379573788026 24.35973252586229 50 18.857785336108275 35.178944591825015 23.887951403218153 22.075318668848563 51 16.51025073863256 36.58276223631523 22.060505406840633 24.846481618211573 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 445.0 1 622.0 2 799.0 3 2834.5 4 4870.0 5 3747.5 6 2625.0 7 3146.0 8 3667.0 9 4242.0 10 4817.0 11 4994.0 12 5171.0 13 5215.0 14 5259.0 15 4800.0 16 4341.0 17 4221.0 18 4101.0 19 4037.0 20 3973.0 21 4241.0 22 4509.0 23 5419.5 24 6330.0 25 6827.5 26 8923.5 27 10522.0 28 12751.5 29 14981.0 30 18294.0 31 21607.0 32 31695.5 33 41784.0 34 42775.5 35 43767.0 36 48689.0 37 53611.0 38 79329.5 39 105048.0 40 170245.0 41 235442.0 42 278911.5 43 322381.0 44 328224.0 45 334067.0 46 306408.0 47 278749.0 48 262008.0 49 245267.0 50 219416.5 51 193566.0 52 172135.5 53 150705.0 54 131594.5 55 112484.0 56 101385.5 57 90287.0 58 84553.5 59 78820.0 60 71050.5 61 63281.0 62 53432.5 63 43584.0 64 36764.0 65 29944.0 66 25719.5 67 21495.0 68 17967.0 69 14439.0 70 12006.5 71 9574.0 72 8199.0 73 6824.0 74 4892.0 75 2026.0 76 1092.0 77 889.0 78 686.0 79 470.0 80 254.0 81 148.5 82 43.0 83 30.0 84 17.0 85 10.5 86 4.0 87 4.0 88 4.0 89 2.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2585521.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.508660446413483 #Duplication Level Percentage of deduplicated Percentage of total 1 77.93221728622406 11.3069207844194 2 10.015879265447767 2.9063398266930984 3 3.5641573934400395 1.5513344819698702 4 1.7015514792989659 0.9874893058096501 5 0.9371663501064739 0.6798514177749743 6 0.546318514626216 0.4755809894580446 7 0.36461076131967496 0.3703009611766832 8 0.2682606156327688 0.31136817466893457 9 0.18443544411596396 0.2408320109665791 >10 1.7231026797702744 5.808576494704725 >50 0.7384916997488224 7.94404169384476 >100 1.9790866691755231 62.92666212966036 >500 0.03978501447933139 3.506971640890865 >1k 0.0049368266142236035 0.9837300879620342 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3315 0.12821400406339767 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07414366388824535 0.0 2 0.0 0.0 0.0 0.24273637692364516 0.0 3 0.0 0.0 0.0 0.33985413384768487 0.0 4 0.0 0.0 0.0 0.5548978329706082 0.0 5 3.867692430268406E-5 0.0 0.0 0.8944812283481743 0.0 6 3.867692430268406E-5 0.0 0.0 1.216234561622203 0.0 7 3.867692430268406E-5 0.0 0.0 1.398286844314937 0.0 8 3.867692430268406E-5 0.0 0.0 1.8575366434850076 0.0 9 3.867692430268406E-5 0.0 0.0 1.983546062863152 0.0 10 3.867692430268406E-5 0.0 0.0 2.1911251155956575 0.0 11 3.867692430268406E-5 0.0 0.0 2.506535433284046 0.0 12 7.735384860536812E-5 0.0 0.0 2.7637756568211977 0.0 13 7.735384860536812E-5 0.0 0.0 2.8707947063667247 0.0 14 1.1603077290805219E-4 0.0 0.0 2.906996307514037 0.0 15 1.1603077290805219E-4 0.0 0.0 2.9645088939521282 0.0 16 1.1603077290805219E-4 0.0 0.0 3.1075361600234537 0.0 17 1.1603077290805219E-4 0.0 0.0 3.2785268423656198 0.0 18 1.1603077290805219E-4 0.0 0.0 3.501112541727567 0.0 19 1.1603077290805219E-4 0.0 0.0 3.622790145583811 0.0 20 1.1603077290805219E-4 0.0 0.0 3.751816365057565 0.0 21 1.1603077290805219E-4 0.0 0.0 3.926868124451513 0.0 22 1.1603077290805219E-4 0.0 0.0 4.099715299160208 0.0 23 1.1603077290805219E-4 0.0 0.0 4.298476013151701 0.0 24 1.1603077290805219E-4 0.0 0.0 4.438602509900326 0.0 25 1.1603077290805219E-4 0.0 0.0 4.554130482792443 0.0 26 1.1603077290805219E-4 0.0 0.0 4.672056424991327 0.0 27 1.1603077290805219E-4 0.0 0.0 4.777218982170325 0.0 28 1.1603077290805219E-4 0.0 0.0 4.890813108847308 0.0 29 1.1603077290805219E-4 0.0 0.0 5.014385881994383 0.0 30 1.1603077290805219E-4 0.0 0.0 5.18653687206563 0.0 31 1.5470769721073624E-4 0.0 0.0 5.35772093902931 0.0 32 1.5470769721073624E-4 0.0 0.0 5.492393989451256 0.0 33 1.5470769721073624E-4 0.0 0.0 5.6298131014986925 0.0 34 1.5470769721073624E-4 0.0 0.0 5.783553875601862 0.0 35 1.5470769721073624E-4 0.0 0.0 6.003664251808436 0.0 36 1.5470769721073624E-4 0.0 0.0 6.167963826246238 0.0 37 1.9338462151342032E-4 0.0 0.0 6.3360537392657035 0.0 38 1.9338462151342032E-4 0.0 0.0 6.480512051536228 0.0 39 1.9338462151342032E-4 0.0 0.0 6.6309652870736695 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGGC 55 1.8189894E-12 45.000004 31 CGTATAT 30 2.1665583E-6 45.000004 12 ACGTTAG 115 0.0 45.000004 1 CGTGCAC 30 2.1665583E-6 45.000004 32 ACCGCGA 30 2.1665583E-6 45.000004 34 TAGGTCG 60 0.0 45.000004 1 CGGTTGC 30 2.1665583E-6 45.000004 28 CGTTATT 55 1.8189894E-12 45.000004 28 GCTTACC 30 2.1665583E-6 45.000004 38 GTATCGC 30 2.1665583E-6 45.000004 21 TATCGGA 60 0.0 45.000004 11 TATCGCG 105 0.0 45.000004 1 TCGGTGA 30 2.1665583E-6 45.000004 16 ATCGCAC 30 2.1665583E-6 45.000004 44 AAACTCG 35 1.2127202E-7 45.0 25 GGTACGA 40 6.8212103E-9 45.0 9 TACCCGC 35 1.2127202E-7 45.0 41 ACCGGCA 40 6.8212103E-9 45.0 29 CTCCGTA 20 7.034925E-4 45.0 15 CTCCGAT 20 7.034925E-4 45.0 12 >>END_MODULE