SRR1545295_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545295_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3699059
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	6733	0.18201926489953255	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACCGAG	35	1.2129021E-7	45.000004	10
ATCTACG	65	0.0	45.000004	1
GCACCTA	65	0.0	45.000004	9
ATCGTAG	35	1.2129021E-7	45.000004	1
TACGATT	65	0.0	45.000004	1
CGTAGCA	35	1.2129021E-7	45.000004	12
TGTTACG	70	0.0	45.000004	1
CGTACTC	35	1.2129021E-7	45.000004	31
CTATTCG	35	1.2129021E-7	45.000004	37
TCGAGTC	35	1.2129021E-7	45.000004	23
ACGTAGC	35	1.2129021E-7	45.000004	11
ACCCGGT	35	1.2129021E-7	45.000004	35
CCCGGTG	35	1.2129021E-7	45.000004	32
GCCCCTA	55	1.8189894E-12	45.0	20
TCGTTAA	20	7.0353184E-4	45.0	29
CGAACTA	20	7.0353184E-4	45.0	27
GCAAGTA	75	0.0	45.0	9
GTCGATC	40	6.8230293E-9	45.0	28
CAAGTCG	105	0.0	45.0	1
TGCCAAC	40	6.8230293E-9	45.0	44