##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545295_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3699059 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.291480076419436 31.0 31.0 33.0 30.0 34.0 2 31.59323600948241 31.0 31.0 34.0 30.0 34.0 3 31.68129732453578 31.0 31.0 34.0 30.0 34.0 4 30.260816602276417 35.0 33.0 37.0 0.0 37.0 5 32.81442226252677 35.0 33.0 37.0 19.0 37.0 6 34.41831449565957 35.0 33.0 37.0 30.0 37.0 7 35.503382346699524 36.0 35.0 37.0 33.0 37.0 8 35.71234495043199 37.0 35.0 37.0 35.0 37.0 9 37.77867235964606 39.0 37.0 39.0 35.0 39.0 10 37.23960228804136 39.0 37.0 39.0 34.0 39.0 11 36.70484304251433 39.0 35.0 39.0 32.0 39.0 12 35.069338715603074 35.0 35.0 39.0 31.0 39.0 13 34.397650591677504 35.0 33.0 39.0 27.0 39.0 14 35.0663276795531 35.0 33.0 40.0 27.0 41.0 15 35.59143852531144 35.0 34.0 40.0 30.0 41.0 16 35.903638736229944 35.0 34.0 40.0 31.0 41.0 17 35.86813511220016 35.0 34.0 40.0 31.0 41.0 18 35.8713872906596 36.0 35.0 40.0 31.0 41.0 19 35.82411770128565 36.0 35.0 40.0 31.0 41.0 20 35.679730980230374 35.0 34.0 40.0 31.0 41.0 21 35.448982024887954 35.0 34.0 40.0 30.0 41.0 22 35.284832169478776 35.0 34.0 40.0 30.0 41.0 23 35.29354465554618 35.0 34.0 40.0 30.0 41.0 24 35.21485464276185 35.0 34.0 40.0 30.0 41.0 25 35.0740772180168 35.0 34.0 39.0 30.0 41.0 26 34.908262074219415 35.0 34.0 39.0 29.0 41.0 27 34.85400881683693 35.0 34.0 39.0 29.0 41.0 28 34.95423701000714 35.0 34.0 39.0 29.0 41.0 29 35.081097922471635 35.0 34.0 39.0 29.0 41.0 30 35.086862361481664 36.0 34.0 39.0 29.0 41.0 31 34.88957894426664 35.0 34.0 39.0 29.0 41.0 32 34.74322307376011 35.0 34.0 39.0 29.0 41.0 33 34.60321881862387 35.0 34.0 39.0 29.0 41.0 34 34.5696940762502 35.0 34.0 39.0 28.0 41.0 35 34.46672761910529 35.0 33.0 39.0 27.0 41.0 36 34.22940266700261 35.0 33.0 39.0 26.0 41.0 37 34.1443802329187 35.0 33.0 39.0 26.0 41.0 38 34.188230033638284 35.0 33.0 39.0 27.0 41.0 39 34.1749412485716 35.0 33.0 39.0 27.0 41.0 40 34.03240202440675 35.0 33.0 39.0 25.0 41.0 41 34.09265004964776 35.0 33.0 39.0 26.0 41.0 42 34.05039687120427 35.0 33.0 38.0 26.0 41.0 43 33.92665621175548 35.0 33.0 38.0 26.0 41.0 44 33.89253212776547 35.0 33.0 38.0 26.0 41.0 45 33.798291943978185 35.0 33.0 38.0 26.0 41.0 46 33.793078996577236 35.0 33.0 38.0 26.0 40.0 47 33.71661414429994 35.0 33.0 38.0 26.0 40.0 48 33.67860664022931 35.0 33.0 38.0 26.0 40.0 49 33.69959954680366 35.0 33.0 38.0 26.0 40.0 50 33.48505227951217 35.0 33.0 38.0 24.0 40.0 51 33.385721341562814 35.0 32.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 3.0 14 24.0 15 70.0 16 275.0 17 765.0 18 1773.0 19 3651.0 20 6664.0 21 10507.0 22 16387.0 23 23830.0 24 33594.0 25 45421.0 26 58522.0 27 71208.0 28 84938.0 29 102561.0 30 125550.0 31 158481.0 32 205461.0 33 311913.0 34 488923.0 35 700557.0 36 218259.0 37 259294.0 38 340822.0 39 429275.0 40 328.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.36745291167294 25.20316653505662 32.52600188318164 11.903378670088799 2 26.965155192171846 27.735999885376255 31.775784057513007 13.523060864938893 3 27.775766755815468 25.868768246194506 32.02044087428722 14.33502412370281 4 21.460295713044857 38.91476183537489 26.58327428678483 13.041668164795425 5 23.41738804382412 31.937122387071952 30.568260738744634 14.077228830359289 6 21.557158185365523 41.04297876838407 26.708630492241404 10.691232554009005 7 89.30682100501777 4.375599307823963 4.449807369928406 1.8677723172298686 8 92.1451915203299 2.39250036293014 3.2148176063155525 2.247490510424408 9 89.86569286945681 3.5564179971176455 4.528232720808184 2.049656412617371 10 67.87177495682009 17.3257036451703 6.962067920517083 7.840453477492519 11 62.16210663306533 14.979728628280869 13.811972179951711 9.046192558702092 12 53.59792855426204 20.914075714931823 15.808777313365372 9.67921841744076 13 18.453260680621746 54.005248361813095 16.724388553953855 10.817102403611296 14 10.995607261198051 53.658078987115374 24.27509266545897 11.071221086227606 15 9.285523696702324 21.660076251825124 58.89376189998592 10.160638151486635 16 10.787067738038242 14.678570955478138 55.940281028229066 18.594080278254552 17 12.342057804430802 15.874685967431176 25.704618390785335 46.07863783735269 18 21.622255822359147 22.35111686512705 34.878167663722046 21.14845964879176 19 33.903595481986095 23.963797279253992 21.177926602414292 20.95468063634562 20 37.52913916755586 22.17972192387307 20.951842076592992 19.33929683197808 21 21.811790512127544 30.508326577110555 25.404109531640344 22.275773379121556 22 22.697799629581468 26.197878974085032 21.103448201285786 30.00087319504771 23 19.15927807585659 34.13362695755867 20.56709557755094 26.139999389033807 24 20.422464199678892 23.241505474770747 40.74768745240343 15.588342873146926 25 14.024512720667609 24.95502234487203 39.40572453697008 21.61474039749028 26 14.894707005214029 41.30109846855646 24.287744531784973 19.51644999444453 27 16.73257982638287 38.53274576047584 27.80901845577483 16.925655957366452 28 11.365971724160119 29.756027140956657 44.1669894965179 14.711011638365326 29 11.405549357282489 23.54190619830611 43.093824672707306 21.958719771704104 30 17.09302284716194 32.84375837206165 31.148705657303655 18.914513123472755 31 33.86169293325681 25.828731036731234 21.031673190397882 19.277902839614075 32 35.152372535826004 26.220560418203657 22.692284713490647 15.934782332479694 33 30.102791007118295 27.312081261747924 22.78065854045583 19.804469190677953 34 17.108594374947792 27.596423847254126 26.961316378030197 28.333665399767888 35 18.69137529301371 23.491217631294877 33.219610717212134 24.59779635847928 36 35.26296823056891 20.722837889311847 25.909697574437175 18.104496305682066 37 19.241163766244334 32.65052003766363 29.486418032261717 18.621898163830313 38 18.42836245650583 35.914458244650874 21.76272397926067 23.89445531958263 39 18.99091093167208 34.40169513381647 26.37865467947389 20.228739255037564 40 25.106979910296108 25.411246481875526 22.420431790896007 27.061341816932362 41 14.514448133971369 21.81741356382799 27.007301046022786 36.66083725617785 42 22.636513772827087 24.501474564206735 21.48900571740002 31.373005945566156 43 21.503522922992037 26.07376632813913 25.150531527072157 27.272179221796677 44 18.88061260985564 31.858345595460904 27.595153253841044 21.665888540842417 45 15.249040364049343 41.98513730113523 19.615204839933615 23.150617494881807 46 21.97834638485085 35.15610321435803 24.005456522861625 18.860093877929497 47 20.450498356473904 26.42726163599986 26.680866674470455 26.441373333055786 48 23.8284385299072 19.603120685558135 32.86352015472043 23.70492062981423 49 19.39030980581818 19.933718278080992 34.87378817153227 25.802183744568552 50 17.95710746976461 35.82565187524719 25.109439995415052 21.10780065957315 51 14.924119891031745 39.388395805527836 21.24210508672611 24.445379216714304 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1118.0 1 1197.5 2 1277.0 3 3645.5 4 6014.0 5 4746.0 6 3478.0 7 4296.0 8 5114.0 9 5990.5 10 6867.0 11 7359.5 12 7852.0 13 8191.0 14 8530.0 15 7856.5 16 7183.0 17 6910.5 18 6638.0 19 7593.0 20 8548.0 21 8278.0 22 8008.0 23 9347.5 24 10687.0 25 11858.0 26 16242.5 27 19456.0 28 23833.5 29 28211.0 30 30881.0 31 33551.0 32 43570.5 33 53590.0 34 59409.5 35 65229.0 36 74973.5 37 84718.0 38 122242.5 39 159767.0 40 256136.0 41 352505.0 42 428616.0 43 504727.0 44 496939.0 45 489151.0 46 434484.5 47 379818.0 48 354492.0 49 329166.0 50 300065.5 51 270965.0 52 247831.5 53 224698.0 54 190332.0 55 155966.0 56 135139.5 57 114313.0 58 107819.5 59 101326.0 60 93546.5 61 85767.0 62 75449.5 63 65132.0 64 51225.0 65 37318.0 66 28138.5 67 18959.0 68 15594.5 69 12230.0 70 10580.0 71 8930.0 72 7272.0 73 5614.0 74 4074.0 75 1628.5 76 723.0 77 512.5 78 302.0 79 165.5 80 29.0 81 21.5 82 14.0 83 9.0 84 4.0 85 3.0 86 2.0 87 1.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3699059.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.389475242739628 #Duplication Level Percentage of deduplicated Percentage of total 1 76.17262510169792 10.199114779736716 2 10.611504196452248 2.8416494545325013 3 4.116513668097326 1.6535387353616533 4 2.173282970607605 1.1639647412167264 5 1.258392069998806 0.8424604733454444 6 0.809142137722548 0.6500393172536085 7 0.5713271501454594 0.5354839512664331 8 0.3763356219517599 0.40311491944672884 9 0.2746019874632763 0.33090988614719724 >10 1.5463278142002186 4.103270915856061 >50 0.40234436266889845 3.9804987863236327 >100 1.4458586826716477 51.63064509419728 >500 0.22529158865966423 18.442167974063842 >1k 0.016233279027083887 3.025377213807423 >5k 2.1936863550113363E-4 0.19776375744473723 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6733 0.18201926489953255 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10410755816546857 0.0 2 0.0 0.0 0.0 0.3629301398004195 0.0 3 0.0 0.0 0.0 0.5069667718195358 0.0 4 0.0 0.0 0.0 0.8291838545965339 0.0 5 0.0 0.0 0.0 1.3101980801063189 0.0 6 2.703390240599028E-5 0.0 0.0 1.8096223931545834 0.0 7 2.703390240599028E-5 0.0 0.0 2.050791836518423 0.0 8 2.703390240599028E-5 0.0 0.0 2.6206394653342917 0.0 9 2.703390240599028E-5 0.0 0.0 2.778355251970839 0.0 10 2.703390240599028E-5 0.0 0.0 3.028229611909407 0.0 11 2.703390240599028E-5 0.0 0.0 3.4197886543577702 0.0 12 2.703390240599028E-5 0.0 0.0 3.7199460727714806 0.0 13 2.703390240599028E-5 0.0 0.0 3.845951091885801 0.0 14 5.406780481198056E-5 0.0 0.0 3.8976399132860546 0.0 15 5.406780481198056E-5 0.0 0.0 3.9771195863596662 0.0 16 8.110170721797084E-5 0.0 0.0 4.166167665884756 0.0 17 8.110170721797084E-5 0.0 0.0 4.370949476610132 0.0 18 8.110170721797084E-5 0.0 0.0 4.642829433107177 0.0 19 8.110170721797084E-5 0.0 0.0 4.77926953855021 0.0 20 8.110170721797084E-5 0.0 0.0 4.923927950324663 0.0 21 8.110170721797084E-5 0.0 0.0 5.126033404711847 0.0 22 8.110170721797084E-5 0.0 0.0 5.308160805221004 0.0 23 8.110170721797084E-5 0.0 0.0 5.539922450547558 0.0 24 8.110170721797084E-5 0.0 0.0 5.686662472807273 0.0 25 8.110170721797084E-5 0.0 0.0 5.80696333851393 0.0 26 8.110170721797084E-5 0.0 0.0 5.932725052506597 0.0 27 1.0813560962396111E-4 0.0 0.0 6.039536000912665 0.0 28 1.0813560962396111E-4 0.0 0.0 6.162053646616613 0.0 29 1.0813560962396111E-4 0.0 0.0 6.278677901596055 0.0 30 1.0813560962396111E-4 0.0 0.0 6.467212336975431 0.0 31 1.0813560962396111E-4 0.0 0.0 6.6396345665208365 0.0 32 1.351695120299514E-4 0.0 0.0 6.774425603917105 0.0 33 1.351695120299514E-4 0.0 0.0 6.905837403512623 0.0 34 1.351695120299514E-4 0.0 0.0 7.067446072095633 0.0 35 1.351695120299514E-4 0.0 0.0 7.283257715002653 0.0 36 1.6220341443594168E-4 0.0 0.0 7.450327231871674 0.0 37 1.6220341443594168E-4 0.0 0.0 7.612098103869119 0.0 38 1.6220341443594168E-4 0.0 0.0 7.7582433802759025 0.0 39 1.8923731684193195E-4 0.0 0.0 7.906037724729451 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGAG 35 1.2129021E-7 45.000004 10 ATCTACG 65 0.0 45.000004 1 GCACCTA 65 0.0 45.000004 9 ATCGTAG 35 1.2129021E-7 45.000004 1 TACGATT 65 0.0 45.000004 1 CGTAGCA 35 1.2129021E-7 45.000004 12 TGTTACG 70 0.0 45.000004 1 CGTACTC 35 1.2129021E-7 45.000004 31 CTATTCG 35 1.2129021E-7 45.000004 37 TCGAGTC 35 1.2129021E-7 45.000004 23 ACGTAGC 35 1.2129021E-7 45.000004 11 ACCCGGT 35 1.2129021E-7 45.000004 35 CCCGGTG 35 1.2129021E-7 45.000004 32 GCCCCTA 55 1.8189894E-12 45.0 20 TCGTTAA 20 7.0353184E-4 45.0 29 CGAACTA 20 7.0353184E-4 45.0 27 GCAAGTA 75 0.0 45.0 9 GTCGATC 40 6.8230293E-9 45.0 28 CAAGTCG 105 0.0 45.0 1 TGCCAAC 40 6.8230293E-9 45.0 44 >>END_MODULE