##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545294_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3224720 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.21553220124538 31.0 31.0 33.0 30.0 34.0 2 31.53574635937384 31.0 31.0 34.0 30.0 34.0 3 31.651745888015082 31.0 31.0 34.0 30.0 34.0 4 30.29284589049592 35.0 33.0 37.0 0.0 37.0 5 32.83263570170433 35.0 33.0 37.0 19.0 37.0 6 34.45108629586445 35.0 33.0 37.0 30.0 37.0 7 35.449919372844775 36.0 35.0 37.0 33.0 37.0 8 35.629638852365474 37.0 35.0 37.0 35.0 37.0 9 37.624701989630104 39.0 37.0 39.0 35.0 39.0 10 37.07316604232305 39.0 37.0 39.0 33.0 39.0 11 36.6432170855144 39.0 35.0 39.0 32.0 39.0 12 35.707755091914954 37.0 35.0 39.0 31.0 39.0 13 35.32606644918008 37.0 35.0 39.0 30.0 39.0 14 36.1756586618373 38.0 35.0 40.0 30.0 41.0 15 36.45218468580218 38.0 35.0 40.0 31.0 41.0 16 36.5772904314173 38.0 35.0 40.0 31.0 41.0 17 36.51244139026024 38.0 35.0 40.0 31.0 41.0 18 36.48852024361805 38.0 35.0 40.0 31.0 41.0 19 36.47218053040264 38.0 35.0 40.0 31.0 41.0 20 36.39966570741026 38.0 35.0 40.0 31.0 41.0 21 36.2271065394825 38.0 35.0 40.0 31.0 41.0 22 36.09692004267037 37.0 34.0 40.0 30.0 41.0 23 36.030302165769434 37.0 34.0 40.0 30.0 41.0 24 35.96819723883004 37.0 34.0 40.0 30.0 41.0 25 35.852999640278846 37.0 34.0 40.0 30.0 41.0 26 35.692234364533974 37.0 34.0 40.0 30.0 41.0 27 35.68290208142102 37.0 34.0 40.0 30.0 41.0 28 35.679250911707065 37.0 34.0 40.0 30.0 41.0 29 35.722355119204146 37.0 34.0 40.0 30.0 41.0 30 35.664494901882954 36.0 34.0 40.0 30.0 41.0 31 35.58105447914858 37.0 34.0 40.0 29.0 41.0 32 35.495778238110596 36.0 34.0 40.0 29.0 41.0 33 35.374897045324865 36.0 34.0 40.0 29.0 41.0 34 35.27206827259421 36.0 34.0 40.0 29.0 41.0 35 35.17000359721154 36.0 34.0 40.0 28.0 41.0 36 35.006288297898735 36.0 34.0 40.0 27.0 41.0 37 34.95982410875983 36.0 33.0 40.0 27.0 41.0 38 34.9264385745119 36.0 33.0 40.0 27.0 41.0 39 34.871494889478775 36.0 33.0 40.0 27.0 41.0 40 34.74157663301 36.0 33.0 40.0 27.0 41.0 41 34.68755643900866 35.0 33.0 40.0 26.0 41.0 42 34.62275019226475 35.0 33.0 40.0 27.0 41.0 43 34.56483601677045 35.0 33.0 40.0 27.0 41.0 44 34.47617312510854 35.0 33.0 40.0 26.0 41.0 45 34.37905058423677 35.0 33.0 40.0 26.0 41.0 46 34.29654109504081 35.0 33.0 39.0 26.0 41.0 47 34.222587077327645 35.0 33.0 39.0 26.0 41.0 48 34.110166153960655 35.0 33.0 39.0 26.0 41.0 49 34.05211150115359 35.0 33.0 39.0 26.0 41.0 50 33.91096405269295 35.0 33.0 39.0 25.0 41.0 51 33.82771031283336 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 4.0 13 13.0 14 22.0 15 70.0 16 241.0 17 635.0 18 1515.0 19 2861.0 20 5122.0 21 8336.0 22 12418.0 23 18368.0 24 25667.0 25 34837.0 26 45427.0 27 56429.0 28 68295.0 29 82623.0 30 102451.0 31 127893.0 32 160989.0 33 229858.0 34 339472.0 35 440170.0 36 254222.0 37 318142.0 38 405460.0 39 482894.0 40 281.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.32934952491999 25.399538564588553 29.751203205239523 12.519908705251929 2 28.325404996402785 27.093236001885433 31.177807685628522 13.403551316083256 3 29.532362499689896 26.512410379815922 30.060408345530774 13.894818774963408 4 23.82613064079982 38.40752065295592 25.506214493041256 12.260134213203006 5 24.166222183631447 33.15633605398298 27.97942146915081 14.698020293234762 6 22.495224391575082 41.34895432781761 25.57620506586618 10.579616214741124 7 89.03582326527575 4.599345059416011 4.4593329033218385 1.905498771986405 8 91.01376243518817 3.1816405765461813 3.77331985412687 2.031277134138778 9 86.69317025974348 5.300677268103898 5.178092981716242 2.828059490436379 10 56.04458681683992 23.158382743307946 10.0010543551068 10.795976084745343 11 47.769852886452156 20.730730109901014 16.973504676375004 14.525912327271826 12 43.42662308665559 21.57517551911484 19.951716738197426 15.046484656032153 13 24.087858790840755 36.73205735691781 20.430642040239153 18.74944181200228 14 16.89777717135131 38.44867151256543 25.12708080081371 19.52647051526954 15 18.057195663499467 23.948435833188615 41.49439331166737 16.499975191644545 16 19.772259296931207 19.384659753404947 40.83635168324692 20.00672926641693 17 20.032871070976704 21.58661837306805 25.056314966880844 33.3241955890744 18 24.496111290282567 25.382916966434294 28.092330496911362 22.028641246371777 19 32.1455506214493 25.93881019127242 21.095381924632218 20.82025726264606 20 34.56340395445186 25.014047731275895 21.96221687464338 18.460331439628867 21 26.511790170929565 28.065630504353866 23.996222927882112 21.426356396834453 22 25.715100845964923 25.468815897194176 22.883444143987695 25.932639112853206 23 24.72859659133196 29.309335384157386 23.07837579696842 22.883692227542234 24 24.160640303654272 23.19404475427324 33.466905653824206 19.178409288248282 25 21.323339700811232 25.787975390111388 30.455822521025084 22.432862388052296 26 20.59127614180456 33.740014636929715 23.281897343025133 22.386811878240593 27 21.780092535165842 32.01022104244709 25.98963630950904 20.22005011287802 28 18.384603934605177 28.92877521149123 33.656255426827755 19.03036542707584 29 19.634945049492668 25.75383289091766 31.825584856979834 22.78563720260984 30 22.335396561561936 29.81198367610211 26.463817013570168 21.388802748765784 31 30.330385273760204 26.786232603140736 21.326471755687315 21.556910367411746 32 31.963488302860405 26.21781115879828 22.3005408221489 19.51815971619241 33 28.926790543054903 27.75524696717855 22.110508819370363 21.20745367039619 34 21.177838696072836 27.142573618794806 26.686099878439055 24.99348780669329 35 23.32394750551986 24.66586246247736 27.87634275223895 24.133847279763824 36 29.5984457565308 27.16986280979434 22.46272544593019 20.76896598774467 37 23.414808107370565 32.33710213599941 25.060253293309188 19.187836463320846 38 22.77943511374631 31.906677168870473 21.854114465752065 23.459773251631148 39 24.0100845964921 30.397181770820414 24.30018730308368 21.29254632960381 40 26.21715993946761 25.576639212086633 23.664318142350343 24.541882706095414 41 18.596033143962888 24.589328685901414 25.93301123818502 30.881626931950677 42 22.985251432682528 25.804503956932695 22.55898186509216 28.651262745292616 43 22.8704507678186 26.34817906670967 23.956777642710065 26.824592522761666 44 21.331991614775855 28.922821206182242 25.997109826589593 23.748077352452306 45 20.80261231982932 33.08172492495473 21.182211168721626 24.933451586494332 46 22.245249199930537 32.19287255947803 23.698739735542933 21.8631385050485 47 22.911787690094023 25.60854895928949 26.999274355602964 24.48038899501352 48 24.08556401796125 21.810482770597137 30.100721923143713 24.0032312882979 49 22.093856210771786 24.045808628346027 29.673491031779502 24.186844129102685 50 19.589173633679824 30.666197375275996 26.083939070679 23.66068992036518 51 18.984842094817534 31.809831551266466 24.07210548512739 25.13322086878861 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 454.0 1 1178.5 2 1903.0 3 5308.5 4 8714.0 5 6446.0 6 4178.0 7 4360.0 8 4542.0 9 4800.5 10 5059.0 11 5176.0 12 5293.0 13 5463.0 14 5633.0 15 5287.0 16 4941.0 17 5050.5 18 5160.0 19 5217.5 20 5275.0 21 6012.0 22 6749.0 23 6918.0 24 7087.0 25 11319.5 26 18764.0 27 21976.0 28 30582.5 29 39189.0 30 44827.5 31 50466.0 32 55771.5 33 61077.0 34 66570.0 35 72063.0 36 72973.5 37 73884.0 38 97422.0 39 120960.0 40 162829.5 41 204699.0 42 242690.0 43 280681.0 44 284015.0 45 287349.0 46 269435.5 47 251522.0 48 244812.0 49 238102.0 50 222301.0 51 206500.0 52 197244.5 53 187989.0 54 177414.0 55 166839.0 56 165062.5 57 163286.0 58 168959.5 59 174633.0 60 165239.5 61 155846.0 62 140704.5 63 125563.0 64 108277.5 65 90992.0 66 76285.0 67 61578.0 68 50399.0 69 39220.0 70 35364.5 71 31509.0 72 25291.5 73 19074.0 74 13828.0 75 7292.5 76 6003.0 77 4147.0 78 2291.0 79 1868.5 80 1446.0 81 995.5 82 545.0 83 377.5 84 210.0 85 130.0 86 50.0 87 41.5 88 33.0 89 25.5 90 18.0 91 10.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3224720.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.65451359236878 #Duplication Level Percentage of deduplicated Percentage of total 1 78.1452804682405 12.233263552695414 2 9.04255740231828 2.831136755287329 3 3.1904866657847615 1.498365506273967 4 1.5694300536499093 0.9827465642853828 5 0.8831850504435086 0.6912916188372407 6 0.5809726536230777 0.5456906581762219 7 0.40053546218546693 0.4389131485905672 8 0.3080693546444704 0.38581407197393125 9 0.22814319240964456 0.32143236359248684 >10 2.440864695471863 9.392822926536063 >50 1.2587249637188538 14.401127175427986 >100 1.93702965162596 53.90351982197341 >500 0.011040289412805458 1.1299377874578063 >1k 0.003463620207938967 1.060365095209032 >5k 2.1647626299618544E-4 0.18357295368319998 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 5417 0.1679835768686894 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4088 0.1267706963705376 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3973 0.12320449527400829 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05761740554218661 0.0 2 0.0 0.0 0.0 0.21000272891909996 0.0 3 0.0 0.0 0.0 0.3003671636607209 0.0 4 0.0 0.0 0.0 0.4518221737081049 0.0 5 0.0 0.0 0.0 0.7770907241558958 0.0 6 0.0 0.0 0.0 1.0588826316703466 0.0 7 0.0 0.0 0.0 1.2269592398719888 0.0 8 0.0 0.0 0.0 1.5957664541417549 0.0 9 0.0 0.0 0.0 1.707249001463693 0.0 10 0.0 0.0 0.0 1.8929395420377584 0.0 11 0.0 0.0 0.0 2.19290356992235 0.0 12 0.0 0.0 0.0 2.4220087325411197 0.0 13 0.0 0.0 0.0 2.5258006896722818 0.0 14 3.101044431764618E-5 0.0 0.0 2.5688741968294924 0.0 15 3.101044431764618E-5 0.0 0.0 2.642244908085043 0.0 16 3.101044431764618E-5 0.0 0.0 2.793017688357439 0.0 17 3.101044431764618E-5 0.0 0.0 2.9678855838646454 0.0 18 3.101044431764618E-5 0.0 0.0 3.16030539085564 0.0 19 3.101044431764618E-5 0.0 0.0 3.2808739983626487 3.101044431764618E-5 20 6.202088863529236E-5 0.0 0.0 3.4017527103128335 3.101044431764618E-5 21 6.202088863529236E-5 0.0 0.0 3.565487856310005 3.101044431764618E-5 22 6.202088863529236E-5 3.101044431764618E-5 0.0 3.7432707335830706 3.101044431764618E-5 23 6.202088863529236E-5 3.101044431764618E-5 0.0 3.930790890371877 3.101044431764618E-5 24 6.202088863529236E-5 3.101044431764618E-5 0.0 4.084478652410132 3.101044431764618E-5 25 6.202088863529236E-5 3.101044431764618E-5 0.0 4.212396735220422 3.101044431764618E-5 26 6.202088863529236E-5 3.101044431764618E-5 0.0 4.330422486293384 3.101044431764618E-5 27 6.202088863529236E-5 3.101044431764618E-5 0.0 4.447548934481134 3.101044431764618E-5 28 6.202088863529236E-5 3.101044431764618E-5 0.0 4.575498027735741 3.101044431764618E-5 29 6.202088863529236E-5 3.101044431764618E-5 0.0 4.704439455208514 3.101044431764618E-5 30 6.202088863529236E-5 3.101044431764618E-5 0.0 4.8686087474261335 3.101044431764618E-5 31 6.202088863529236E-5 3.101044431764618E-5 0.0 5.021645290133717 3.101044431764618E-5 32 6.202088863529236E-5 3.101044431764618E-5 0.0 5.169813193083431 3.101044431764618E-5 33 6.202088863529236E-5 3.101044431764618E-5 0.0 5.317857054255874 3.101044431764618E-5 34 6.202088863529236E-5 3.101044431764618E-5 0.0 5.467978615197598 3.101044431764618E-5 35 6.202088863529236E-5 3.101044431764618E-5 0.0 5.651994591778511 3.101044431764618E-5 36 6.202088863529236E-5 3.101044431764618E-5 0.0 5.82459872485053 3.101044431764618E-5 37 1.2404177727058473E-4 3.101044431764618E-5 0.0 5.9965826490361955 3.101044431764618E-5 38 1.2404177727058473E-4 3.101044431764618E-5 0.0 6.167295145004838 3.101044431764618E-5 39 1.2404177727058473E-4 3.101044431764618E-5 0.0 6.3458532833858445 3.101044431764618E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTCTCG 25 3.892379E-5 45.0 27 CCGTAAA 25 3.892379E-5 45.0 28 AATCTCG 45 3.8562575E-10 45.0 18 TCGACTA 45 3.8562575E-10 45.0 14 GTACGAT 20 7.0351845E-4 45.0 20 ATTACGC 30 2.1667274E-6 44.999996 22 CAATCGT 30 2.1667274E-6 44.999996 20 TCGAACG 100 0.0 40.5 1 GACTAAT 740 0.0 40.43919 9 TAGGGTA 1170 0.0 40.384613 5 GGACTAA 890 0.0 40.19663 8 ATTACGG 185 0.0 40.135136 2 TCGTTAG 45 1.9301297E-8 40.0 1 CGGTGAT 45 1.9301297E-8 40.0 41 ACGGTAC 45 1.9301297E-8 40.0 13 GGCGATT 1585 0.0 39.463722 8 AGTACGG 400 0.0 38.8125 2 GTAGGGT 665 0.0 38.57143 4 TACGCCC 35 6.2517993E-6 38.57143 25 ACGTAGG 280 0.0 38.57143 2 >>END_MODULE