##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545292_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5233590 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.340731123378024 31.0 31.0 33.0 30.0 34.0 2 31.666345472228432 31.0 31.0 34.0 30.0 34.0 3 31.75090005139875 31.0 31.0 34.0 30.0 34.0 4 30.28193381598482 35.0 33.0 37.0 0.0 37.0 5 32.88617507294228 35.0 33.0 37.0 19.0 37.0 6 34.54552668436007 35.0 33.0 37.0 30.0 37.0 7 35.56422264640524 37.0 35.0 37.0 33.0 37.0 8 35.7679447568495 37.0 35.0 37.0 35.0 37.0 9 37.80419157786529 39.0 37.0 39.0 35.0 39.0 10 37.19094598545167 39.0 37.0 39.0 33.0 39.0 11 36.772294352442586 39.0 35.0 39.0 32.0 39.0 12 35.87067137471602 37.0 35.0 39.0 32.0 39.0 13 35.524808210043204 37.0 35.0 39.0 31.0 39.0 14 36.398924065507615 38.0 35.0 40.0 31.0 41.0 15 36.6788095743075 38.0 35.0 40.0 31.0 41.0 16 36.83261738118576 38.0 35.0 40.0 32.0 41.0 17 36.77109383807291 38.0 35.0 40.0 32.0 41.0 18 36.728958898194165 38.0 35.0 40.0 32.0 41.0 19 36.74614824623251 38.0 35.0 40.0 32.0 41.0 20 36.675816026857284 38.0 35.0 40.0 32.0 41.0 21 36.51059846109458 38.0 35.0 40.0 31.0 41.0 22 36.409474949317776 38.0 35.0 40.0 31.0 41.0 23 36.345672282314816 38.0 35.0 40.0 31.0 41.0 24 36.300716143221 38.0 35.0 40.0 31.0 41.0 25 36.20345976662291 37.0 35.0 40.0 31.0 41.0 26 36.08497627823349 37.0 35.0 40.0 31.0 41.0 27 36.07662961752831 37.0 34.0 40.0 30.0 41.0 28 36.1401546548354 37.0 35.0 40.0 31.0 41.0 29 36.19724051750328 37.0 35.0 40.0 31.0 41.0 30 36.15095851986877 37.0 35.0 40.0 30.0 41.0 31 36.0415936288475 37.0 35.0 40.0 30.0 41.0 32 35.92543970773408 37.0 34.0 40.0 30.0 41.0 33 35.825026415901895 37.0 34.0 40.0 30.0 41.0 34 35.751586578237884 37.0 34.0 40.0 30.0 41.0 35 35.63055569886063 37.0 34.0 40.0 30.0 41.0 36 35.49057071723234 37.0 34.0 40.0 29.0 41.0 37 35.458807052138205 37.0 34.0 40.0 29.0 41.0 38 35.448776652355264 37.0 34.0 40.0 29.0 41.0 39 35.4010207142707 37.0 34.0 40.0 29.0 41.0 40 35.31651161057706 37.0 34.0 40.0 29.0 41.0 41 35.31999602567262 36.0 34.0 40.0 29.0 41.0 42 35.272996547303094 36.0 34.0 40.0 29.0 41.0 43 35.21657179870796 36.0 34.0 40.0 29.0 41.0 44 35.133915725152335 36.0 34.0 40.0 28.0 41.0 45 35.051567279821306 36.0 34.0 40.0 28.0 41.0 46 35.0334972743375 36.0 34.0 40.0 28.0 41.0 47 34.99244514759467 36.0 34.0 40.0 28.0 41.0 48 34.90651006288227 36.0 34.0 40.0 28.0 41.0 49 34.892067204347306 36.0 34.0 40.0 28.0 41.0 50 34.73329741152823 35.0 34.0 40.0 27.0 41.0 51 34.646967951253345 35.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 0.0 12 7.0 13 6.0 14 20.0 15 68.0 16 236.0 17 651.0 18 1558.0 19 3088.0 20 5699.0 21 9548.0 22 15100.0 23 22627.0 24 32597.0 25 45529.0 26 60504.0 27 75590.0 28 93170.0 29 115510.0 30 146737.0 31 188029.0 32 243293.0 33 353523.0 34 531676.0 35 743380.0 36 384959.0 37 499220.0 38 700238.0 39 960467.0 40 555.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.68736947296215 25.594802038371366 31.032484394077485 11.685344094588991 2 28.538307356900326 26.805233119140016 31.18274454055438 13.473714983405271 3 28.30991728431154 26.215007289451407 31.270695641041808 14.204379785195249 4 21.879952384500886 39.1460928349374 26.07067041934886 12.903284361212858 5 22.801671510378156 33.407355180669484 29.491286096159612 14.299687212792747 6 21.42026792316555 40.965398512302265 26.6816850383771 10.932648526155086 7 90.06223261661688 4.174495900519529 3.973620402056714 1.7896510808068649 8 92.88668008002155 2.10027915828332 3.1203246719746867 1.8927160897204403 9 88.98303076855466 4.401510244402026 4.542904583660547 2.072554403382764 10 52.235234322902635 29.061122479980284 9.461287567425037 9.242355629692046 11 43.89371349303251 21.214672910946405 22.487680540508524 12.403933055512564 12 40.55470527878569 23.46515489367719 21.883047774090063 14.09709205344706 13 19.88090393018941 41.22437944126307 23.562774309795 15.33194231875252 14 14.705775576611849 42.947365001843856 26.897273191060055 15.449586230484238 15 13.424761970272794 26.21829375247201 46.179066376999344 14.177877900255847 16 15.934874531631252 22.62001799911724 43.70050003917005 17.744607430081455 17 17.05162230896956 22.677664853379802 26.231745322044713 34.038967515605925 18 21.127352352782697 26.615592738445308 32.52717541878519 19.729879489986796 19 29.096681245569485 25.82269532003844 24.78358067789032 20.297042756501753 20 31.220825475438467 26.08811542363846 24.38773384999589 18.303325250927184 21 22.244654243072155 29.99556709639081 28.306669035977215 19.453109624559815 22 23.444977539318135 26.229700836328405 24.833145126003377 25.492176498350084 23 19.29650584015943 32.58367583245917 25.480826736523117 22.638991590858282 24 18.473304175527698 25.649200644299615 37.99890705997222 17.878588120200476 25 16.944219933162515 28.475807237479433 34.68823503560653 19.891737793751517 26 17.12797525216916 37.26936959142768 25.98294860697915 19.61970654942401 27 17.90925540594506 35.40395789505865 28.929931461960145 17.756855237036145 28 14.778249729153412 30.021018077457345 37.55924709425079 17.64148509913845 29 15.544702584650308 26.717759702231163 37.368727775771504 20.36880993734702 30 18.582903895796193 31.802414786026418 30.187595894978397 19.42708542319899 31 28.390110803482887 27.924254670312347 24.189915526435964 19.4957189997688 32 30.234294241619995 27.33037933808342 25.35229163919986 17.083034781096725 33 27.371861380046962 28.185528480450323 24.797280642923884 19.64532949657883 34 18.58684000848366 27.39742700517236 29.389214669089476 24.626518317254504 35 19.64758416306971 26.63502490642179 31.900798495869946 21.816592434638558 36 29.15503507152834 25.428549045683745 27.067424081748857 18.34899180103906 37 20.06389495547034 32.273162399041574 28.84094856494299 18.821994080545092 38 19.184020911076335 34.208793581461286 25.28115500067831 21.326030506784065 39 19.50964825292008 32.90087683597683 27.502020601537374 20.087454309565707 40 23.990568615424593 26.705129748413615 26.175397767115882 23.128903869045914 41 17.30892179173378 25.033925087750475 28.16309645960039 29.49405666091536 42 21.46620197608143 26.25280161418835 25.477903313022228 26.803093096707997 43 20.54985201362736 27.826310429361108 26.45146066084657 25.172376896164966 44 19.40574252090821 31.05615839223172 28.87075602024614 20.66734306661393 45 17.21949942582434 35.69297556744032 23.880452996891236 23.207072009844104 46 20.490504605825063 33.40431711310974 26.62103833124108 19.484139949824115 47 20.889695218769525 27.1171604959502 27.683941615602293 24.309202669677983 48 21.64881085449949 24.147229721854405 32.09458517002669 22.109374253619407 49 19.907864391364242 24.576820117739448 32.877718736087466 22.637596754808843 50 18.195636264972993 33.66591574808114 27.153579091980838 20.984868894965025 51 17.571953477440914 34.381103601925254 25.131983972760572 22.914958947873256 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 971.0 1 1592.0 2 2213.0 3 6231.0 4 10249.0 5 8144.5 6 6040.0 7 6676.5 8 7313.0 9 8097.0 10 8881.0 11 9392.0 12 9903.0 13 9879.5 14 9856.0 15 10549.5 16 11243.0 17 11409.0 18 11575.0 19 12956.0 20 14337.0 21 16776.5 22 19216.0 23 20888.5 24 22561.0 25 28153.0 26 48390.5 27 63036.0 28 76983.5 29 90931.0 30 102355.0 31 113779.0 32 129925.0 33 146071.0 34 163756.5 35 181442.0 36 199170.0 37 216898.0 38 258156.0 39 299414.0 40 370705.0 41 441996.0 42 507343.5 43 572691.0 44 557470.5 45 542250.0 46 516117.0 47 489984.0 48 464761.0 49 439538.0 50 410357.0 51 381176.0 52 342828.0 53 304480.0 54 256339.5 55 208199.0 56 184246.0 57 160293.0 58 147577.5 59 134862.0 60 118515.0 61 102168.0 62 87536.0 63 72904.0 64 58155.0 65 43406.0 66 35014.0 67 26622.0 68 20817.5 69 15013.0 70 11180.0 71 7347.0 72 6442.5 73 5538.0 74 4297.5 75 2081.5 76 1106.0 77 859.5 78 613.0 79 381.5 80 150.0 81 195.0 82 240.0 83 239.0 84 238.0 85 130.5 86 23.0 87 19.0 88 15.0 89 8.5 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5233590.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.172298302386576 #Duplication Level Percentage of deduplicated Percentage of total 1 75.31091546340558 9.920178439097961 2 10.812423394794108 2.848489326558626 3 4.108668534098217 1.6236182267031323 4 2.118157094265278 1.1160398838791439 5 1.2350711293257002 0.8134362670071795 6 0.8088085843679146 0.6392320765695101 7 0.5246218167326985 0.48373325461601585 8 0.3955794392097965 0.4168552300449788 9 0.28968111768065563 0.3434189485192511 >10 1.8357880480588704 5.103755794951393 >50 0.569118048447003 5.491739059957599 >100 1.8904879554488905 62.33153684613298 >500 0.09447637954841998 7.4500029186592265 >1k 0.0060439434727945435 1.279835820592004 >5k 1.5905114402090903E-4 0.1381279067110248 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6593 0.1259747133420845 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07864582437676623 0.0 2 0.0 0.0 0.0 0.24923618395785685 0.0 3 0.0 0.0 0.0 0.3604218137072258 0.0 4 0.0 0.0 0.0 0.5788760678616399 0.0 5 0.0 0.0 0.0 0.9493865587483926 0.0 6 1.9107343143043302E-5 0.0 0.0 1.317145592222547 0.0 7 1.9107343143043302E-5 0.0 0.0 1.5087731366041284 0.0 8 3.8214686286086605E-5 0.0 0.0 1.986036353631064 0.0 9 3.8214686286086605E-5 0.0 0.0 2.1164439705823344 0.0 10 3.8214686286086605E-5 0.0 0.0 2.344776721141702 0.0 11 3.8214686286086605E-5 0.0 0.0 2.7231403300602453 0.0 12 3.8214686286086605E-5 0.0 0.0 3.0258388601323376 0.0 13 7.642937257217321E-5 0.0 0.0 3.1449922519723557 0.0 14 9.553671571521652E-5 0.0 0.0 3.1882321695050626 0.0 15 9.553671571521652E-5 0.0 0.0 3.264852615508666 0.0 16 9.553671571521652E-5 0.0 0.0 3.439054262943792 0.0 17 9.553671571521652E-5 0.0 0.0 3.6490057493995516 0.0 18 9.553671571521652E-5 0.0 0.0 3.8946879675328026 0.0 19 9.553671571521652E-5 0.0 0.0 4.04529204618627 0.0 20 9.553671571521652E-5 0.0 0.0 4.1955904073494485 0.0 21 9.553671571521652E-5 0.0 0.0 4.40015362303887 0.0 22 1.1464405885825981E-4 0.0 0.0 4.616276781329833 0.0 23 1.337514020013031E-4 0.0 0.0 4.838743577544286 0.0 24 1.337514020013031E-4 0.0 0.0 5.005416931781053 0.0 25 1.337514020013031E-4 0.0 0.0 5.1538236659730705 0.0 26 1.337514020013031E-4 0.0 0.0 5.289581339004393 0.0 27 1.337514020013031E-4 0.0 0.0 5.420791464367671 0.0 28 1.5285874514434642E-4 0.0 0.0 5.561192221782753 0.0 29 1.5285874514434642E-4 0.0 0.0 5.713191136485663 0.0 30 1.5285874514434642E-4 0.0 0.0 5.9043027826023815 0.0 31 1.5285874514434642E-4 0.0 0.0 6.086625050873301 0.0 32 1.5285874514434642E-4 0.0 0.0 6.249228541020599 0.0 33 1.7196608828738973E-4 0.0 0.0 6.4134943700213425 0.0 34 1.7196608828738973E-4 0.0 0.0 6.590772299702499 0.0 35 1.7196608828738973E-4 0.0 0.0 6.811748723151794 0.0 36 1.7196608828738973E-4 0.0 0.0 7.006911126014839 0.0 37 1.7196608828738973E-4 0.0 0.0 7.1928446821397936 0.0 38 1.7196608828738973E-4 0.0 0.0 7.384357582462516 0.0 39 1.9107343143043304E-4 0.0 0.0 7.592895125525691 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTCCG 30 2.1669875E-6 45.000004 31 CGCCTAT 30 2.1669875E-6 45.000004 27 TATCGCC 30 2.1669875E-6 45.000004 31 CGAACCG 35 1.2130295E-7 45.0 29 GTCGATA 40 6.8230293E-9 45.0 12 CTCCGCG 40 6.8230293E-9 45.0 25 ATTACCG 175 0.0 45.0 1 CAATTCG 45 3.8562575E-10 45.0 23 TGACGTA 35 1.2130295E-7 45.0 29 TACGCAC 25 3.8927137E-5 45.0 18 CTCGCTA 45 3.8562575E-10 45.0 38 TACTCGC 160 0.0 45.0 45 TCGGTGA 25 3.8927137E-5 45.0 31 GTTAGCG 400 0.0 43.875 1 CGCTAAG 105 0.0 42.857147 26 ATCGGCC 95 0.0 42.63158 27 GTCGGTA 75 0.0 42.0 15 CTATACG 140 0.0 41.785713 1 ACGTAGA 70 0.0 41.785713 27 CGTTTTT 5065 0.0 41.579468 1 >>END_MODULE