##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545291_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2406996 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.278417994878264 31.0 31.0 33.0 30.0 34.0 2 31.600684421577768 31.0 31.0 34.0 30.0 34.0 3 31.70626498756126 31.0 31.0 34.0 30.0 34.0 4 30.33542722962564 35.0 33.0 37.0 0.0 37.0 5 32.88735918131979 35.0 33.0 37.0 19.0 37.0 6 34.52245579136816 35.0 33.0 37.0 30.0 37.0 7 35.490483989171565 36.0 35.0 37.0 33.0 37.0 8 35.657397851928295 37.0 35.0 37.0 35.0 37.0 9 37.68748680928427 39.0 37.0 39.0 35.0 39.0 10 37.15557649451848 39.0 37.0 39.0 33.0 39.0 11 36.72101158456433 39.0 35.0 39.0 32.0 39.0 12 35.62466825869258 37.0 35.0 39.0 31.0 39.0 13 35.17496331526932 37.0 35.0 39.0 30.0 39.0 14 36.03147782547208 38.0 35.0 40.0 30.0 41.0 15 36.3524571706808 38.0 35.0 40.0 31.0 41.0 16 36.536280076909144 38.0 35.0 40.0 32.0 41.0 17 36.47061316263093 37.0 35.0 40.0 32.0 41.0 18 36.44311664830353 37.0 35.0 40.0 31.0 41.0 19 36.425766390970324 37.0 35.0 40.0 31.0 41.0 20 36.30721488527609 37.0 35.0 40.0 31.0 41.0 21 36.145277349858496 37.0 34.0 40.0 31.0 41.0 22 36.02919032686386 37.0 34.0 40.0 30.0 41.0 23 35.99429371714785 37.0 34.0 40.0 30.0 41.0 24 35.91627863112361 36.0 34.0 40.0 30.0 41.0 25 35.80308234828807 36.0 34.0 40.0 30.0 41.0 26 35.61551535607039 36.0 34.0 40.0 30.0 41.0 27 35.61101181721947 36.0 34.0 40.0 30.0 41.0 28 35.608263578335816 36.0 34.0 40.0 30.0 41.0 29 35.65991717476888 36.0 34.0 40.0 30.0 41.0 30 35.66265045725045 36.0 34.0 40.0 30.0 41.0 31 35.561155066315024 36.0 34.0 40.0 30.0 41.0 32 35.461456105452605 36.0 34.0 40.0 30.0 41.0 33 35.33648996508511 36.0 34.0 40.0 29.0 41.0 34 35.25541712574512 36.0 34.0 40.0 29.0 41.0 35 35.13202473124176 36.0 34.0 40.0 29.0 41.0 36 34.945175230868685 35.0 34.0 40.0 27.0 41.0 37 34.900737682987426 35.0 33.0 40.0 27.0 41.0 38 34.891966168618474 35.0 33.0 40.0 27.0 41.0 39 34.84546546816031 35.0 34.0 40.0 27.0 41.0 40 34.671232108404006 35.0 33.0 40.0 27.0 41.0 41 34.646656662495495 35.0 34.0 40.0 27.0 41.0 42 34.58886720210586 35.0 33.0 40.0 27.0 41.0 43 34.54013342772485 35.0 33.0 40.0 27.0 41.0 44 34.494932687881494 35.0 33.0 40.0 27.0 41.0 45 34.40492963012817 35.0 33.0 39.0 27.0 41.0 46 34.35369065839744 35.0 33.0 39.0 27.0 41.0 47 34.29885342559771 35.0 33.0 39.0 27.0 41.0 48 34.19837465454866 35.0 33.0 39.0 26.0 41.0 49 34.18098783712146 35.0 33.0 39.0 26.0 41.0 50 34.01377733905665 35.0 33.0 39.0 26.0 40.0 51 33.939671274900334 35.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 4.0 13 11.0 14 21.0 15 57.0 16 134.0 17 435.0 18 926.0 19 1881.0 20 3409.0 21 5482.0 22 8591.0 23 12621.0 24 18027.0 25 24995.0 26 32869.0 27 40841.0 28 49090.0 29 60390.0 30 75134.0 31 94917.0 32 121229.0 33 177844.0 34 270017.0 35 363741.0 36 177208.0 37 223702.0 38 289293.0 39 353937.0 40 188.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.69332229883224 25.443291139661223 30.650736436620583 12.212650124885958 2 28.137354611308034 27.009226438265788 31.277742048595016 13.575676901831162 3 29.246538008372262 26.42605139352122 30.28883305165443 14.03857754645209 4 23.126544456243384 38.37829393983206 25.608143927119116 12.887017676805446 5 24.00934608948249 33.05813553491572 29.00744330277242 13.925075072829369 6 22.771122178848657 41.64680788833883 24.46917236256313 11.11289757024939 7 90.11232257968024 4.136691544148807 4.007318666088352 1.7436672100826092 8 91.54464735296611 3.0657300635314724 3.5174549521478222 1.8721676313546012 9 88.16686857809485 4.631457634329263 4.6868378676159 2.514835919959983 10 59.475586997236384 22.22525504820116 9.155519992555035 9.143637962007416 11 52.478442008212724 19.943780546373986 14.861013479041926 12.716763966371362 12 48.52816539786522 20.695298205730296 17.596497875359994 13.180038521044487 13 23.50735107162621 40.48569253958046 18.57730548783629 17.429650900957043 14 14.936709491831312 43.117022213580746 23.13057437569485 18.815693918893093 15 15.257108861003507 23.93946645528285 46.398913832843924 14.404510850869714 16 17.47410465160723 17.788770733312393 45.7504291656488 18.986695449431572 17 17.523377687374637 19.593094462973763 25.859536118880133 37.02399173077146 18 23.241127114461346 25.96028410516677 28.563612070813576 22.234976709558303 19 33.873633358759214 26.07951986625653 20.050344911250374 19.996501863733883 20 37.251869134805375 23.922682048495304 20.537258890334677 18.288189926364648 21 26.455798015451627 28.162406584805293 22.714038577546454 22.66775682219663 22 24.220605268974275 27.29256716670904 21.451261240151627 27.03556632416506 23 24.47137427731496 30.61928644667461 21.917028528506073 22.99231074750436 24 23.940754367684868 23.02999257165363 34.401054260164955 18.628198800496556 25 21.415698239631475 24.39979127509975 31.253105530711313 22.931404954557465 26 19.797747898210048 36.284189919717356 22.722887782115134 21.195174399957455 27 22.630531999222267 33.497022845073275 26.210263747841704 17.662181407862747 28 18.09824361984814 29.935031051152556 34.99764852122729 16.96907680777201 29 19.161394534930675 26.2559223197712 32.81945628492943 21.763226860368693 30 22.89152121565636 29.858961128310973 25.882012267573355 21.367505388459307 31 30.668144026828465 27.914379583514055 19.79164070069082 21.625835688966664 32 33.62452617287274 27.804283845922466 21.120849390692797 17.45034059051199 33 29.942758525564646 28.381808694322714 20.930903084176293 20.744529695936347 34 21.057118499573743 27.511096819438002 26.45583956101298 24.975945119975272 35 23.58529054472878 24.1461971685869 27.642463884443515 24.6260484022408 36 30.79942800071126 26.82817088187932 22.129783348206644 20.242617769202774 37 23.778975951767265 33.37325861779579 24.55961704963365 18.288148380803293 38 23.119980257549244 32.607573922017316 20.598372411088345 23.67407340934509 39 24.97295383955769 30.589664461428267 23.279598304276366 21.157783394737674 40 26.51338016349009 25.138305173751846 23.05845128118202 25.28986338157604 41 17.089226571211587 24.93394255744505 26.478855802003824 31.49797506933954 42 23.25421396628827 26.605071217401278 22.004731208527144 28.13598360778331 43 23.78221650555298 27.92784034539318 22.83044924046405 25.459493908589792 44 22.354918745191103 30.86789508582482 24.768632768812246 22.00855340017183 45 19.9763107209152 34.580364902974495 20.041578797804398 25.401745578305906 46 21.613081201630578 33.10508201924723 22.424258287093124 22.857578492029067 47 23.510840898780057 25.91686899355047 26.50365850213295 24.068631605536527 48 24.85596153878112 20.88092377386585 30.025600374907146 24.23751431244589 49 21.144114905051776 24.86385519543863 28.983222240502272 25.008807659007324 50 19.218353499548815 32.65456195191018 24.335686473928497 23.791398074612506 51 18.222464848300536 33.79116541946892 21.77922190149049 26.20714783074006 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 326.0 1 831.5 2 1337.0 3 3424.0 4 5511.0 5 4213.5 6 2916.0 7 3145.0 8 3374.0 9 3652.0 10 3930.0 11 3989.5 12 4049.0 13 4003.5 14 3958.0 15 3935.5 16 3913.0 17 3995.0 18 4077.0 19 4066.5 20 4056.0 21 4495.0 22 4934.0 23 5362.0 24 5790.0 25 7510.5 26 12573.5 27 15916.0 28 21457.5 29 26999.0 30 30053.0 31 33107.0 32 35763.0 33 38419.0 34 43670.5 35 48922.0 36 49550.5 37 50179.0 38 68792.5 39 87406.0 40 124612.5 41 161819.0 42 196124.5 43 230430.0 44 229440.0 45 228450.0 46 211637.5 47 194825.0 48 182393.0 49 169961.0 50 162526.5 51 155092.0 52 144989.5 53 134887.0 54 128709.0 55 122531.0 56 126879.0 57 131227.0 58 133690.5 59 136154.0 60 132010.0 61 127866.0 62 110587.5 63 93309.0 64 75462.0 65 57615.0 66 48674.5 67 39734.0 68 33029.0 69 26324.0 70 21541.5 71 16759.0 72 13145.0 73 9531.0 74 7740.5 75 4761.5 76 3573.0 77 2565.5 78 1558.0 79 1047.0 80 536.0 81 390.5 82 245.0 83 201.5 84 158.0 85 125.5 86 93.0 87 52.0 88 11.0 89 6.5 90 2.0 91 3.0 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2406996.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.976756134808625 #Duplication Level Percentage of deduplicated Percentage of total 1 78.82118746579158 11.804857029311947 2 8.755695921691332 2.6226384521941903 3 2.9145507810858198 1.3095154887251497 4 1.4671551795034103 0.878929013413758 5 0.7956537311092535 0.5958155949286942 6 0.5041060925549095 0.45299244085596874 7 0.3430032123345186 0.3595952825213046 8 0.2515391137310493 0.30137919717726536 9 0.21854839377960406 0.2945831397562131 >10 2.46630998641895 9.267142690678916 >50 1.3482163377437328 14.84543176338486 >100 2.098268725202181 55.233627312871455 >500 0.013642839565669971 1.3514087324012192 >1k 0.0021222194879931067 0.682083861779092 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3074 0.12771105560624113 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2707 0.1124638345888402 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2441 0.10141271526832617 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.061695158612644144 0.0 2 0.0 0.0 0.0 0.181346375315954 0.0 3 0.0 0.0 0.0 0.26011675964563297 0.0 4 0.0 0.0 0.0 0.4385549456667149 0.0 5 0.0 0.0 0.0 0.7254270468251713 0.0 6 0.0 0.0 0.0 1.0186971644323464 0.0 7 0.0 0.0 0.0 1.1722080136402386 0.0 8 0.0 0.0 0.0 1.5378089535670187 0.0 9 0.0 0.0 0.0 1.640135671185162 0.0 10 0.0 0.0 0.0 1.8147101200001994 0.0 11 0.0 0.0 0.0 2.0882460959635996 0.0 12 0.0 0.0 0.0 2.300710096734685 0.0 13 0.0 0.0 0.0 2.390365418139457 0.0 14 0.0 0.0 0.0 2.42626078315045 0.0 15 0.0 0.0 0.0 2.488329851815292 0.0 16 0.0 0.0 0.0 2.62094328366146 0.0 17 0.0 0.0 0.0 2.7728338559764953 0.0 18 0.0 0.0 0.0 2.940220922677063 0.0 19 0.0 0.0 0.0 3.0434200970836676 0.0 20 0.0 0.0 0.0 3.1515216477302 0.0 21 0.0 0.0 0.0 3.3083561418465175 0.0 22 0.0 0.0 0.0 3.4772388487558765 0.0 23 0.0 0.0 0.0 3.642548637388679 0.0 24 0.0 0.0 0.0 3.771630696519645 0.0 25 0.0 0.0 0.0 3.8771564223621477 0.0 26 0.0 0.0 0.0 3.9781121364555654 0.0 27 0.0 0.0 0.0 4.073542290888726 0.0 28 0.0 0.0 0.0 4.181062203676284 0.0 29 4.154556135531592E-5 0.0 0.0 4.291905761372266 0.0 30 4.154556135531592E-5 0.0 0.0 4.430335571808179 0.0 31 4.154556135531592E-5 0.0 0.0 4.5817275973869505 0.0 32 4.154556135531592E-5 0.0 0.0 4.718038584193742 0.0 33 4.154556135531592E-5 0.0 0.0 4.8447110007661 0.0 34 4.154556135531592E-5 0.0 0.0 4.982683810027105 0.0 35 4.154556135531592E-5 0.0 0.0 5.146996505187379 0.0 36 4.154556135531592E-5 0.0 0.0 5.31878740139161 0.0 37 4.154556135531592E-5 0.0 0.0 5.487960927230456 0.0 38 4.154556135531592E-5 0.0 0.0 5.630379111556479 0.0 39 4.154556135531592E-5 0.0 0.0 5.788667700320233 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCTCGA 60 0.0 45.000004 38 CATACGT 30 2.1664964E-6 45.000004 24 CTCTACA 30 2.1664964E-6 45.000004 20 TCGTTTG 40 6.8212103E-9 45.0 1 ACTATCG 35 1.2126657E-7 45.0 1 TCGTTGC 45 3.8562575E-10 45.0 30 ATCTCGC 20 7.034827E-4 45.0 40 TCGTTAG 50 2.1827873E-11 45.0 1 CGAACTT 40 6.8212103E-9 45.0 30 CGAAACG 35 1.2126657E-7 45.0 39 CTATCGG 35 1.2126657E-7 45.0 2 AACCCGT 25 3.892083E-5 45.0 22 CGCATCG 35 1.2126657E-7 45.0 21 TAGAACG 85 0.0 45.0 1 ACCGAAT 25 3.892083E-5 45.0 17 TACGGAC 35 1.2126657E-7 45.0 17 TATGCGA 35 1.2126657E-7 45.0 34 ATCGTAC 40 6.8212103E-9 45.0 40 GTGCTTA 40 6.8212103E-9 45.0 30 CTACGTC 20 7.034827E-4 45.0 21 >>END_MODULE