SRR1545290_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545290_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3314430
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3838	0.11579668298923194	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTGC	30	2.1667438E-6	45.000004	41
GGTACGA	35	1.2128476E-7	45.000004	9
ACACGGC	25	3.8924016E-5	45.000004	38
GATCGAC	20	7.0352113E-4	45.000004	9
GGTCGAC	60	0.0	45.000004	9
GCGGTAC	25	3.8924016E-5	45.000004	31
TAGACCG	60	0.0	45.000004	1
ACGCACC	20	7.0352113E-4	45.000004	41
CCGGCTA	20	7.0352113E-4	45.000004	20
CGGTTTA	35	1.2128476E-7	45.000004	36
ATTACGA	30	2.1667438E-6	45.000004	21
GCTATCG	40	6.8212103E-9	45.000004	37
TATATCG	20	7.0352113E-4	45.000004	1
CGTCTAC	20	7.0352113E-4	45.000004	38
CGCGATA	20	7.0352113E-4	45.000004	11
CTACGTC	35	1.2128476E-7	45.000004	38
ACTACGC	20	7.0352113E-4	45.000004	38
CGTACTA	20	7.0352113E-4	45.000004	21
CGTACAG	50	2.1827873E-11	45.000004	20
ACCACGT	20	7.0352113E-4	45.000004	26