##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545290_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3314430 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.358510513119903 31.0 31.0 33.0 30.0 34.0 2 31.672558479135176 31.0 31.0 34.0 30.0 34.0 3 31.753495171115397 31.0 31.0 34.0 30.0 34.0 4 30.294169736576123 35.0 33.0 37.0 0.0 37.0 5 32.89682750880242 35.0 33.0 37.0 19.0 37.0 6 34.55118708194169 35.0 33.0 37.0 30.0 37.0 7 35.54970145696243 37.0 35.0 37.0 33.0 37.0 8 35.75540711374203 37.0 35.0 37.0 35.0 37.0 9 37.80195207019005 39.0 37.0 39.0 35.0 39.0 10 37.24083688598039 39.0 37.0 39.0 34.0 39.0 11 36.79817223474323 39.0 35.0 39.0 33.0 39.0 12 35.63718135546685 37.0 35.0 39.0 31.0 39.0 13 35.21055173891136 37.0 35.0 39.0 30.0 39.0 14 36.01136907401876 38.0 35.0 40.0 31.0 41.0 15 36.38011573634079 38.0 35.0 40.0 31.0 41.0 16 36.56503591869492 37.0 35.0 40.0 32.0 41.0 17 36.50948519051541 37.0 35.0 40.0 32.0 41.0 18 36.47450692879318 37.0 35.0 40.0 31.0 41.0 19 36.4774492144954 37.0 35.0 40.0 31.0 41.0 20 36.38304384162586 37.0 35.0 40.0 31.0 41.0 21 36.221980249997735 37.0 35.0 40.0 31.0 41.0 22 36.09029968953938 37.0 35.0 40.0 31.0 41.0 23 36.05513859094928 36.0 34.0 40.0 31.0 41.0 24 36.007844486080565 36.0 34.0 40.0 31.0 41.0 25 35.89598513168177 36.0 34.0 40.0 31.0 41.0 26 35.75976140693875 36.0 34.0 40.0 30.0 41.0 27 35.74273283792387 36.0 34.0 40.0 30.0 41.0 28 35.80644515044819 36.0 34.0 40.0 30.0 41.0 29 35.87486415462085 36.0 35.0 40.0 30.0 41.0 30 35.84917647981704 36.0 35.0 40.0 30.0 41.0 31 35.69515904695528 36.0 34.0 40.0 30.0 41.0 32 35.58519383423394 36.0 34.0 40.0 30.0 41.0 33 35.45538780423783 36.0 34.0 40.0 30.0 41.0 34 35.408609021762416 36.0 34.0 40.0 30.0 41.0 35 35.2642351776927 36.0 34.0 40.0 29.0 41.0 36 35.09657859722486 36.0 34.0 40.0 28.0 41.0 37 35.02810528507164 35.0 34.0 40.0 28.0 41.0 38 35.039457463274225 35.0 34.0 40.0 29.0 41.0 39 34.97329917964778 35.0 34.0 40.0 28.0 41.0 40 34.862127122914046 35.0 34.0 40.0 27.0 41.0 41 34.899389035218725 35.0 34.0 40.0 28.0 41.0 42 34.860882565026266 35.0 34.0 40.0 28.0 41.0 43 34.78745425306916 35.0 33.0 40.0 27.0 41.0 44 34.725536215880254 35.0 34.0 40.0 27.0 41.0 45 34.621007232012744 35.0 33.0 40.0 27.0 41.0 46 34.59693431449752 35.0 34.0 40.0 27.0 41.0 47 34.568445253029935 35.0 33.0 40.0 27.0 41.0 48 34.50933403330286 35.0 33.0 39.0 27.0 41.0 49 34.50086500544588 35.0 34.0 39.0 27.0 41.0 50 34.321769655717574 35.0 33.0 39.0 27.0 41.0 51 34.23629160971871 35.0 33.0 39.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 4.0 13 6.0 14 10.0 15 40.0 16 157.0 17 453.0 18 1060.0 19 2202.0 20 4072.0 21 6623.0 22 10458.0 23 15749.0 24 22626.0 25 31713.0 26 41776.0 27 51733.0 28 63037.0 29 78193.0 30 97723.0 31 125502.0 32 163939.0 33 245399.0 34 377281.0 35 521848.0 36 232296.0 37 294408.0 38 401139.0 39 524699.0 40 281.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.60495168098285 25.236828051882227 31.0725222738148 12.08569799332012 2 27.731676336504318 26.428164118717245 32.8600091116723 12.980150433106145 3 28.292466577963634 26.517108522430703 31.6308083139484 13.559616585657263 4 22.0614705997713 39.0627649399746 26.199980087073794 12.675784373180305 5 23.50696801561656 32.38541770379824 29.179949493578082 14.927664787007117 6 22.10193004528682 40.573643130191314 25.917005337267646 11.407421487254219 7 90.32675301635575 4.199243912226235 3.955370908421659 1.5186321629963524 8 93.05880649161395 2.1317089212926508 3.109041373629855 1.7004432134635519 9 89.59483229393894 4.057500082970526 4.414273344134587 1.933394278955959 10 57.653865068805196 25.616953744686118 8.396345676330471 8.33283551017822 11 51.25481606188696 18.163243755336513 18.85506708544154 11.726873097334986 12 44.710825089080174 22.99565837866541 19.284944922656386 13.008571609598029 13 20.17297091807641 44.91722558629991 20.94203226497467 13.96777123064901 14 13.01288607694234 45.84103450668742 26.469196815138652 14.676882601231583 15 12.784460676496412 23.60040791327619 50.335442293244995 13.279689116982407 16 15.614449543360397 19.071424045763525 46.529116620354024 18.78500979052205 17 16.33608192057156 19.160157251774816 26.611544066400555 37.89221676125307 18 22.25405273304912 23.588792039656894 33.316256490557954 20.84089873673603 19 31.605947327293077 24.42021705089563 23.514631475095264 20.459204146716026 20 33.80071384823333 24.827858787182112 22.350268371937258 19.0211589926473 21 22.873314566908938 29.422042402464378 25.77927426435315 21.925368766273536 22 22.728342429920076 25.85424944862314 23.655500342441986 27.761907779014795 23 20.562811705180074 32.33044595903368 24.093795916643284 23.01294641914296 24 20.025223039859043 24.09488207625444 38.7383350983427 17.14155978554382 25 16.760438446429703 26.362753173245473 35.59224361353234 21.284564766792478 26 17.197014267913335 38.36008001375802 24.708351058854767 19.734554659473876 27 17.807767851485774 35.80196293178616 28.626973567099018 17.763295649629047 28 14.520747157128072 29.085755318410705 39.643437936538106 16.75005958792311 29 14.571193236846156 25.274149702965516 39.10515533590995 21.049501724278382 30 19.669415253904894 31.07333689352317 30.153088162972214 19.10415968959972 31 30.81078797862679 26.516836982527913 22.948561291081724 19.723813747763565 32 33.01973491671268 26.223272176513007 24.137393156591028 16.61959975018329 33 29.405538810594884 26.460477367149103 24.111717550227336 20.022266272028673 34 19.205353560038983 27.632413416484887 27.706815349848995 25.45541767362714 35 20.55321729528154 25.52683266806057 31.144721716856296 22.775228319801595 36 31.67144878606578 24.10722205628117 25.32175969925447 18.89956945839858 37 20.729688060993897 33.067013030898224 27.859088893112844 18.34421001499504 38 21.12176150952049 34.31214416958572 22.729126878528135 21.83696744236566 39 21.353807442003603 33.059168544817666 25.567925706682598 20.01909830649614 40 25.38620516951633 25.787692001339597 23.501446704259855 25.32465612488422 41 17.35106790609547 24.224255754383105 26.031172780840144 32.39350355868128 42 22.089982289564116 26.30847536378804 22.997347960282763 28.60419438636508 43 22.380680841049593 26.933982615412 25.470593737082996 25.21474280645541 44 19.90891344816454 31.587723982705924 28.163153242035584 20.34020932709395 45 17.67646322293728 37.901388775747265 21.51869250519697 22.90345549611849 46 21.102542518623114 33.74480679935917 25.262292460543744 19.890358221473978 47 22.217183648470478 25.46543447893001 27.455791795270983 24.86159007732853 48 23.204502735010244 21.660194965650202 32.068228926240714 23.067073373098843 49 20.525459882996472 23.256789251847227 32.59568010185763 23.622070763298666 50 19.10853449914465 34.900691823330106 25.157357373666063 20.833416303859185 51 16.962132252001098 36.03096158313798 23.677766614470663 23.329139550390263 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 379.0 1 770.0 2 1161.0 3 3887.5 4 6614.0 5 5112.0 6 3610.0 7 4035.5 8 4461.0 9 4963.0 10 5465.0 11 5968.0 12 6471.0 13 6328.5 14 6186.0 15 6074.0 16 5962.0 17 5957.0 18 5952.0 19 6638.0 20 7324.0 21 9599.5 22 11875.0 23 11419.5 24 10964.0 25 14505.0 26 22147.0 27 26248.0 28 34647.5 29 43047.0 30 49104.5 31 55162.0 32 61855.0 33 68548.0 34 77814.0 35 87080.0 36 93933.5 37 100787.0 38 133123.0 39 165459.0 40 221775.0 41 278091.0 42 329753.0 43 381415.0 44 376282.5 45 371150.0 46 341484.0 47 311818.0 48 289731.5 49 267645.0 50 253654.0 51 239663.0 52 211598.0 53 183533.0 54 167295.0 55 151057.0 56 132505.5 57 113954.0 58 108249.5 59 102545.0 60 97960.5 61 93376.0 62 77888.0 63 62400.0 64 52375.0 65 42350.0 66 32753.5 67 23157.0 68 21521.5 69 19886.0 70 15878.5 71 11871.0 72 10182.0 73 8493.0 74 7358.0 75 4617.5 76 3012.0 77 1983.0 78 954.0 79 715.5 80 477.0 81 371.0 82 265.0 83 255.0 84 245.0 85 140.0 86 35.0 87 23.0 88 11.0 89 6.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3314430.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.769294077315442 #Duplication Level Percentage of deduplicated Percentage of total 1 77.37968874122551 10.654636898890688 2 10.153113015431673 2.7960239781939533 3 3.5459480633822182 1.464756050027908 4 1.7344805222241584 0.9553028952752041 5 1.001298735775444 0.689358837606813 6 0.5947810655315341 0.4913829241753632 7 0.4005202553840521 0.38604168262131483 8 0.28000677537832774 0.3084396507060003 9 0.21162056038732893 0.26224791559014815 >10 1.802832931796562 5.642777928418056 >50 0.7602094502785678 7.712796666763294 >100 2.0916148210672993 64.49446769609696 >500 0.04052773497924665 3.3846508869597995 >1k 0.0033573271580441015 0.7571159886744899 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3838 0.11579668298923194 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.061217162528700256 0.0 2 0.0 0.0 0.0 0.18745304622514278 0.0 3 0.0 0.0 0.0 0.26776851524998263 0.0 4 0.0 0.0 0.0 0.46336775855878687 0.0 5 0.0 0.0 0.0 0.7631176401372182 0.0 6 0.0 0.0 0.0 1.0804572731962963 0.0 7 0.0 0.0 0.0 1.2532169935705386 0.0 8 0.0 0.0 0.0 1.6920858186777215 0.0 9 3.01711003098572E-5 0.0 0.0 1.816632120756812 0.0 10 6.03422006197144E-5 0.0 0.0 2.0273772564211643 0.0 11 6.03422006197144E-5 0.0 0.0 2.3309286966386376 0.0 12 6.03422006197144E-5 0.0 0.0 2.5885597221845082 0.0 13 6.03422006197144E-5 0.0 0.0 2.688546748611375 0.0 14 6.03422006197144E-5 0.0 0.0 2.725053779986302 0.0 15 6.03422006197144E-5 0.0 0.0 2.7820771595719322 0.0 16 6.03422006197144E-5 0.0 0.0 2.9181186508690784 0.0 17 6.03422006197144E-5 0.0 0.0 3.0801072884327017 0.0 18 6.03422006197144E-5 0.0 0.0 3.2840940976276465 0.0 19 6.03422006197144E-5 0.0 0.0 3.4091834795123144 0.0 20 6.03422006197144E-5 0.0 0.0 3.546130103818756 0.0 21 6.03422006197144E-5 0.0 0.0 3.7108341404102667 0.0 22 6.03422006197144E-5 0.0 0.0 3.890171160652058 0.0 23 6.03422006197144E-5 0.0 0.0 4.081667134318722 0.0 24 6.03422006197144E-5 0.0 0.0 4.21921718063136 0.0 25 6.03422006197144E-5 0.0 0.0 4.340716201579156 0.0 26 6.03422006197144E-5 0.0 0.0 4.450448493406106 0.0 27 6.03422006197144E-5 0.0 0.0 4.555926660089367 0.0 28 6.03422006197144E-5 0.0 0.0 4.666594256025923 0.0 29 6.03422006197144E-5 0.0 0.0 4.797084264866055 0.0 30 6.03422006197144E-5 0.0 0.0 4.965469175695368 0.0 31 6.03422006197144E-5 0.0 0.0 5.12996201458471 0.0 32 6.03422006197144E-5 0.0 0.0 5.266154361383405 0.0 33 6.03422006197144E-5 0.0 0.0 5.400174388959791 0.0 34 6.03422006197144E-5 0.0 0.0 5.553534091834795 0.0 35 6.03422006197144E-5 0.0 0.0 5.747986833331825 0.0 36 6.03422006197144E-5 0.0 0.0 5.907652296171589 0.0 37 6.03422006197144E-5 0.0 0.0 6.074920876289437 0.0 38 6.03422006197144E-5 0.0 0.0 6.222668754506808 0.0 39 6.03422006197144E-5 0.0 0.0 6.396756003294684 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTGC 30 2.1667438E-6 45.000004 41 GGTACGA 35 1.2128476E-7 45.000004 9 ACACGGC 25 3.8924016E-5 45.000004 38 GATCGAC 20 7.0352113E-4 45.000004 9 GGTCGAC 60 0.0 45.000004 9 GCGGTAC 25 3.8924016E-5 45.000004 31 TAGACCG 60 0.0 45.000004 1 ACGCACC 20 7.0352113E-4 45.000004 41 CCGGCTA 20 7.0352113E-4 45.000004 20 CGGTTTA 35 1.2128476E-7 45.000004 36 ATTACGA 30 2.1667438E-6 45.000004 21 GCTATCG 40 6.8212103E-9 45.000004 37 TATATCG 20 7.0352113E-4 45.000004 1 CGTCTAC 20 7.0352113E-4 45.000004 38 CGCGATA 20 7.0352113E-4 45.000004 11 CTACGTC 35 1.2128476E-7 45.000004 38 ACTACGC 20 7.0352113E-4 45.000004 38 CGTACTA 20 7.0352113E-4 45.000004 21 CGTACAG 50 2.1827873E-11 45.000004 20 ACCACGT 20 7.0352113E-4 45.000004 26 >>END_MODULE