##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545289_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3256446 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.266460429560325 31.0 31.0 33.0 30.0 34.0 2 31.595255379637802 31.0 31.0 34.0 30.0 34.0 3 31.69722759106093 31.0 31.0 34.0 30.0 34.0 4 30.330658638282348 35.0 33.0 37.0 0.0 37.0 5 32.88925012114434 35.0 33.0 37.0 19.0 37.0 6 34.51128162420012 35.0 33.0 37.0 30.0 37.0 7 35.48892197199032 36.0 35.0 37.0 33.0 37.0 8 35.654591846448554 37.0 35.0 37.0 35.0 37.0 9 37.67425131569816 39.0 37.0 39.0 35.0 39.0 10 37.13620278057736 39.0 37.0 39.0 33.0 39.0 11 36.74020143432441 39.0 35.0 39.0 32.0 39.0 12 35.80491922789446 37.0 35.0 39.0 31.0 39.0 13 35.42173215831001 37.0 35.0 39.0 30.0 39.0 14 36.212717176946896 38.0 35.0 40.0 30.0 41.0 15 36.50430254332484 38.0 35.0 40.0 31.0 41.0 16 36.65925582675101 38.0 35.0 40.0 32.0 41.0 17 36.60719661864499 38.0 35.0 40.0 31.0 41.0 18 36.56305217405724 38.0 35.0 40.0 31.0 41.0 19 36.55846680706512 38.0 35.0 40.0 31.0 41.0 20 36.478866838264786 38.0 35.0 40.0 31.0 41.0 21 36.32319344463259 38.0 35.0 40.0 31.0 41.0 22 36.2394850091173 38.0 35.0 40.0 30.0 41.0 23 36.16254591662199 37.0 34.0 40.0 30.0 41.0 24 36.09232181341254 37.0 34.0 40.0 30.0 41.0 25 35.9581249005818 37.0 34.0 40.0 30.0 41.0 26 35.831713776307055 37.0 34.0 40.0 30.0 41.0 27 35.84115136562989 37.0 34.0 40.0 30.0 41.0 28 35.85624297163226 37.0 34.0 40.0 30.0 41.0 29 35.879365111535705 37.0 34.0 40.0 30.0 41.0 30 35.80463548297745 37.0 34.0 40.0 30.0 41.0 31 35.686619400413825 37.0 34.0 40.0 30.0 41.0 32 35.608040483398156 37.0 34.0 40.0 30.0 41.0 33 35.47860243959212 37.0 34.0 40.0 29.0 41.0 34 35.357925480723466 37.0 34.0 40.0 29.0 41.0 35 35.217855293777326 36.0 34.0 40.0 28.0 41.0 36 35.05105443173325 36.0 34.0 40.0 27.0 41.0 37 35.00104162636199 36.0 33.0 40.0 27.0 41.0 38 34.93612330743393 36.0 33.0 40.0 27.0 41.0 39 34.868369688918534 36.0 33.0 40.0 27.0 41.0 40 34.745683791470825 36.0 33.0 40.0 26.0 41.0 41 34.720804828331254 36.0 33.0 40.0 26.0 41.0 42 34.660515175132645 35.0 33.0 40.0 27.0 41.0 43 34.58254704668832 35.0 33.0 40.0 27.0 41.0 44 34.507634089433694 35.0 33.0 40.0 27.0 41.0 45 34.40782435821138 35.0 33.0 40.0 26.0 41.0 46 34.375999172103576 35.0 33.0 39.0 26.0 41.0 47 34.29090794074276 35.0 33.0 39.0 26.0 41.0 48 34.17706788320764 35.0 33.0 39.0 26.0 41.0 49 34.102150319704364 35.0 33.0 39.0 26.0 41.0 50 33.94733982998643 35.0 33.0 39.0 25.0 41.0 51 33.85630776619664 35.0 33.0 39.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 2.0 13 4.0 14 32.0 15 76.0 16 204.0 17 596.0 18 1341.0 19 2569.0 20 4752.0 21 7754.0 22 12057.0 23 17370.0 24 24652.0 25 33765.0 26 43795.0 27 54733.0 28 66556.0 29 81845.0 30 100871.0 31 126995.0 32 161749.0 33 231385.0 34 338404.0 35 439990.0 36 262188.0 37 331364.0 38 421847.0 39 489321.0 40 226.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.89472633662588 25.05737850405012 30.212507746174815 11.835387413149181 2 29.419066061589845 26.194415629800094 31.11044985852675 13.276068450083311 3 29.75937571204927 26.513628661430282 30.139606184165192 13.587389442355255 4 22.552377653429538 38.46656754019566 25.42044302285375 13.560611783521054 5 24.101704741918027 32.18223179503054 28.653998868705333 15.062064594346106 6 22.513316664854877 41.13281780198413 25.409050234519476 10.944815298641524 7 89.47383128723769 4.2893387453684175 4.368074889004761 1.8687550783891398 8 91.0707869867948 2.753124111377864 4.079232390157859 2.09685651166947 9 87.2281315274382 4.57550961999677 5.214488433095467 2.9818704194695687 10 55.92056493490142 23.306082766304122 10.092935672816315 10.680416625978136 11 46.66464605892436 20.553020071574963 17.547565659003713 15.234768210496966 12 40.712973591455224 21.379350371540013 22.00518602181642 15.902490015188336 13 23.660149746072868 35.363460656187755 23.274637442168547 17.701752155570826 14 17.196047470156113 37.3165100849208 27.716596559562173 17.770845885360913 15 16.971231827581356 22.440046602953036 42.879445874428754 17.709275695036858 16 21.089248831394716 19.34516954987124 39.934701819099715 19.630879799634325 17 21.843967318972894 19.55149878118661 25.399070029105346 33.20546387073515 18 24.88943467817369 24.24471340842133 29.33464887794854 21.531203035456446 19 31.62975833162902 24.385449658922642 22.830103738861325 21.154688270587013 20 33.88242888105622 24.124858818478796 22.749647929061314 19.24306437140367 21 26.22629087047659 26.729170390050992 26.07747833067092 20.967060408801498 22 26.315345011094916 23.71210823087501 24.098449659536808 25.874097098493266 23 24.521978868987848 27.885123843601278 24.01295768454321 23.579939602867668 24 23.749695219880813 23.304455225113514 33.18246333579614 19.76338621920953 25 22.135143650470482 24.924104376366138 30.606280589329593 22.334471383833787 26 20.420022318810137 32.75110350363556 24.67367799128252 22.155196186271784 27 20.76549096776056 30.575295890059284 27.701211689062248 20.95800145311791 28 18.813454913731103 27.477655087785884 33.393091732520666 20.31579826596234 29 19.602720266204322 24.987946982692176 32.7335383421067 22.6757944089968 30 22.75833838485269 27.738184511581032 28.179033215966115 21.324443887600165 31 30.03341679855892 25.09917253349203 23.413838276452303 21.453572391496742 32 32.76891433175923 24.775383961533525 23.591363099526294 18.864338607180958 33 30.064984955991903 26.34863283469156 22.52360395351251 21.062778255804027 34 22.294335603906838 26.45359388732379 26.30610180546522 24.945968703304157 35 23.319471595721225 25.610865342155222 28.581926431453187 22.48773663067037 36 31.893481421156682 24.442536433891426 24.05945008761085 19.60453205734104 37 23.790168791375628 30.687688357184488 25.29524518447412 20.226897666965765 38 23.761763591350814 31.080632075581782 22.16265830908911 22.994946023978287 39 23.891966886599686 29.78618407920782 24.417631982842643 21.904217051349846 40 26.51731366035242 24.936633372701404 24.11530852960559 24.430744437340586 41 20.54948861427458 23.717297937690354 25.95154349250686 29.781669955528205 42 24.11702819576925 24.829154237472387 23.669669326621722 27.38414824013664 43 23.3335052999497 24.8882984701727 25.808289159408755 25.96990707046885 44 22.06583496240994 27.711498977719884 27.446271180299014 22.776394879571164 45 20.611120221247337 32.304205259353296 22.45325118242403 24.63142333697534 46 23.67633303300592 29.86538084770943 25.076417665147833 21.38186845413681 47 22.695631986527644 25.99736031243878 26.630873043802968 24.676134657230612 48 24.191219507401627 23.107184949481734 29.45373575978229 23.247859783334345 49 23.39716365632963 23.23511582872862 29.668294822023768 23.699425692917984 50 21.26207528084298 30.257372608051845 25.297118392259538 23.183433718845635 51 20.035431264636355 31.772398498240108 23.712998772281193 24.47917146484235 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 464.0 1 1145.0 2 1826.0 3 5225.0 4 8624.0 5 6370.0 6 4116.0 7 4361.0 8 4606.0 9 4926.5 10 5247.0 11 5271.0 12 5295.0 13 5587.0 14 5879.0 15 5634.5 16 5390.0 17 5372.0 18 5354.0 19 6111.0 20 6868.0 21 7406.0 22 7944.0 23 8229.0 24 8514.0 25 11120.0 26 16962.0 27 20198.0 28 24620.0 29 29042.0 30 38466.5 31 47891.0 32 50494.0 33 53097.0 34 62571.0 35 72045.0 36 76367.5 37 80690.0 38 100170.0 39 119650.0 40 161087.0 41 202524.0 42 240182.0 43 277840.0 44 282977.0 45 288114.0 46 265560.5 47 243007.0 48 244571.5 49 246136.0 50 239004.5 51 231873.0 52 212181.0 53 192489.0 54 188134.0 55 183779.0 56 177896.5 57 172014.0 58 170609.5 59 169205.0 60 161984.0 61 154763.0 62 136730.5 63 118698.0 64 103923.5 65 89149.0 66 77225.0 67 65301.0 68 54149.0 69 42997.0 70 36930.5 71 30864.0 72 24704.5 73 18545.0 74 14732.0 75 8567.0 76 6215.0 77 4704.0 78 3193.0 79 2324.5 80 1456.0 81 991.0 82 526.0 83 352.5 84 179.0 85 174.5 86 170.0 87 92.0 88 14.0 89 11.5 90 9.0 91 5.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3256446.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.017669459609994 #Duplication Level Percentage of deduplicated Percentage of total 1 77.87118617130432 12.473149205197055 2 9.098178743130504 2.9146323958382867 3 3.1250017671541395 1.501657361009164 4 1.5232193435940038 0.9759369584069144 5 0.8967616103685717 0.7182015529475676 6 0.573893323309837 0.5515460134712438 7 0.40865540145968465 0.45819950004258175 8 0.2878402962130727 0.3688424577517784 9 0.2355429572068533 0.3395564308870595 >10 2.7383598785986334 10.627973096769326 >50 1.3158032742192765 15.463242698214447 >100 1.9152825631386359 52.26576570684872 >500 0.008806860259375809 0.920854626324237 >1k 0.0014678100432293014 0.42044199629160006 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3873 0.11893334021199797 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05628835853565513 0.0 2 0.0 0.0 0.0 0.20083244125651092 0.0 3 0.0 0.0 0.0 0.2883818739816352 0.0 4 0.0 0.0 0.0 0.4436431619010418 0.0 5 0.0 0.0 0.0 0.7781796473824532 0.0 6 0.0 0.0 0.0 1.079336184294166 0.0 7 0.0 0.0 0.0 1.2426123448692226 0.0 8 0.0 0.0 0.0 1.615657069086974 0.0 9 0.0 0.0 0.0 1.7349589091911857 0.0 10 0.0 0.0 0.0 1.950347096190141 0.0 11 0.0 0.0 0.0 2.2727230852284976 0.0 12 0.0 0.0 0.0 2.534265883727229 0.0 13 0.0 0.0 0.0 2.6417757272805997 0.0 14 0.0 0.0 0.0 2.6897728382414448 0.0 15 0.0 0.0 0.0 2.7649775245774073 0.0 16 0.0 0.0 0.0 2.924630102879028 0.0 17 0.0 0.0 0.0 3.1068532995787432 0.0 18 0.0 0.0 0.0 3.318556487655561 0.0 19 3.070832435114846E-5 0.0 0.0 3.453673114800614 0.0 20 6.141664870229693E-5 0.0 0.0 3.593979448761011 0.0 21 6.141664870229693E-5 0.0 0.0 3.7739302294587413 0.0 22 6.141664870229693E-5 0.0 0.0 3.958180175565632 0.0 23 6.141664870229693E-5 0.0 0.0 4.150137911084661 0.0 24 9.212497305344538E-5 0.0 0.0 4.302881116407273 0.0 25 1.2283329740459385E-4 0.0 0.0 4.4413142425822505 0.0 26 1.8424994610689077E-4 0.0 0.0 4.575939536537685 0.0 27 1.8424994610689077E-4 0.0 0.0 4.709367205843425 0.0 28 1.8424994610689077E-4 0.0 0.0 4.843900374825807 0.0 29 1.8424994610689077E-4 0.0 0.0 4.9975955382033055 0.0 30 1.8424994610689077E-4 0.0 0.0 5.188754857289204 0.0 31 1.8424994610689077E-4 0.0 0.0 5.362748223062812 0.0 32 1.8424994610689077E-4 0.0 0.0 5.511591471192828 0.0 33 1.8424994610689077E-4 0.0 0.0 5.664365384839791 0.0 34 1.8424994610689077E-4 0.0 0.0 5.835871376340956 0.0 35 1.8424994610689077E-4 0.0 0.0 6.048403689175254 0.0 36 1.8424994610689077E-4 0.0 0.0 6.223533262949854 0.0 37 1.8424994610689077E-4 0.0 0.0 6.413617790683463 0.0 38 1.8424994610689077E-4 0.0 0.0 6.628054019627532 0.0 39 1.8424994610689077E-4 0.0 0.0 6.972232918955204 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAA 20 7.035194E-4 45.0 29 CGTCGTT 25 3.892387E-5 45.0 29 ATACGAC 25 3.892387E-5 45.0 12 ACGCGTC 40 6.8212103E-9 45.0 35 TAGTACG 85 0.0 42.352943 1 TATTACG 70 0.0 41.785713 1 TACGATC 65 0.0 41.538464 11 TCGAACG 60 3.6379788E-12 41.250004 1 CGTATTT 620 0.0 41.008064 1 CGCATAT 55 6.184564E-11 40.909092 29 TACGGGA 850 0.0 40.764706 4 ACGTTAG 155 0.0 40.64516 1 TGTTACG 145 0.0 40.34483 1 ACGGGAT 1030 0.0 39.757282 5 CTATACG 80 0.0 39.375 1 TATAGCG 200 0.0 39.375 1 TACGTCA 40 3.4608274E-7 39.375 38 TAGACGC 35 6.251821E-6 38.571426 45 CCGTCGA 35 6.251821E-6 38.571426 19 CCGAATA 35 6.251821E-6 38.571426 38 >>END_MODULE