##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545287_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1740313 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.334484084184858 31.0 31.0 33.0 30.0 34.0 2 31.642798737928178 31.0 31.0 34.0 30.0 34.0 3 31.736932379405314 31.0 31.0 34.0 30.0 34.0 4 30.328922440963208 35.0 33.0 37.0 0.0 37.0 5 32.903463342513675 35.0 33.0 37.0 19.0 37.0 6 34.55312176602715 35.0 33.0 37.0 30.0 37.0 7 35.52567670298389 36.0 35.0 37.0 33.0 37.0 8 35.70515361317188 37.0 35.0 37.0 35.0 37.0 9 37.73375306625877 39.0 37.0 39.0 35.0 39.0 10 37.20840848743875 39.0 37.0 39.0 34.0 39.0 11 36.75739076821238 39.0 35.0 39.0 32.0 39.0 12 35.747023092972356 37.0 35.0 39.0 31.0 39.0 13 35.33527474655421 37.0 35.0 39.0 30.0 39.0 14 36.21159182285026 38.0 35.0 40.0 31.0 41.0 15 36.48243045934841 38.0 35.0 40.0 31.0 41.0 16 36.663091064653315 38.0 35.0 40.0 32.0 41.0 17 36.60077813588705 38.0 35.0 40.0 32.0 41.0 18 36.57072951819586 38.0 35.0 40.0 31.0 41.0 19 36.555230582084945 38.0 35.0 40.0 31.0 41.0 20 36.45892319370136 38.0 35.0 40.0 31.0 41.0 21 36.29061151643411 37.0 35.0 40.0 31.0 41.0 22 36.17815243579747 37.0 35.0 40.0 31.0 41.0 23 36.138891107519164 37.0 34.0 40.0 31.0 41.0 24 36.066927041285105 37.0 34.0 40.0 31.0 41.0 25 35.962171747266154 37.0 34.0 40.0 30.0 41.0 26 35.79043884634546 37.0 34.0 40.0 30.0 41.0 27 35.800099752171015 37.0 34.0 40.0 30.0 41.0 28 35.793061363099625 36.0 34.0 40.0 30.0 41.0 29 35.84501178810938 36.0 34.0 40.0 30.0 41.0 30 35.79246664249477 36.0 34.0 40.0 30.0 41.0 31 35.698545606451255 36.0 34.0 40.0 30.0 41.0 32 35.59067880318081 36.0 34.0 40.0 30.0 41.0 33 35.47412505681449 36.0 34.0 40.0 29.0 41.0 34 35.378602010098184 36.0 34.0 40.0 29.0 41.0 35 35.25851211822241 36.0 34.0 40.0 29.0 41.0 36 35.09218514140847 36.0 34.0 40.0 28.0 41.0 37 35.03186840528112 36.0 34.0 40.0 27.0 41.0 38 35.03688302046816 35.0 34.0 40.0 28.0 41.0 39 34.98279562354588 36.0 34.0 40.0 28.0 41.0 40 34.84105445399764 36.0 34.0 40.0 27.0 41.0 41 34.804550101045045 35.0 34.0 40.0 27.0 41.0 42 34.75359145165266 35.0 33.0 40.0 27.0 41.0 43 34.691094647916785 35.0 33.0 40.0 27.0 41.0 44 34.61911851488784 35.0 33.0 40.0 27.0 41.0 45 34.49133690318926 35.0 33.0 40.0 27.0 41.0 46 34.424097849065085 35.0 33.0 39.0 27.0 41.0 47 34.36386960276686 35.0 33.0 39.0 27.0 41.0 48 34.253310755019356 35.0 33.0 39.0 26.0 41.0 49 34.21052132576151 35.0 33.0 39.0 26.0 41.0 50 34.08484967933929 35.0 33.0 39.0 26.0 41.0 51 33.98762866220042 35.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 1.0 13 4.0 14 13.0 15 52.0 16 98.0 17 284.0 18 692.0 19 1276.0 20 2329.0 21 3745.0 22 5966.0 23 8710.0 24 12274.0 25 17136.0 26 22441.0 27 28124.0 28 34265.0 29 42386.0 30 52910.0 31 66431.0 32 85661.0 33 125369.0 34 189272.0 35 255172.0 36 133393.0 37 168405.0 38 218526.0 39 265192.0 40 182.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.28148442262972 25.02590051329847 29.36333866379209 12.329276400279719 2 28.84774175679892 26.621992710506674 30.82330592255531 13.706959610139096 3 29.013286690382706 26.192817039233745 30.615584667815504 14.178311602568044 4 22.966788158222112 37.83422867035987 26.1660977077112 13.032885463706817 5 23.33861782334557 32.886785308160086 29.443611580215745 14.330985288278603 6 22.780442368700342 41.313085634595616 25.36974670648326 10.536725290220781 7 90.02679403072895 4.3057771791625985 3.9305573192868177 1.7368714708216282 8 91.99368159635651 2.702789670593738 3.544132578449968 1.7593961545997758 9 88.26509943900896 4.652151653179629 4.653932941947799 2.428815965863612 10 58.978471114104195 22.32201908507263 9.181336920427533 9.518172880395653 11 50.07265934346293 20.185162094404856 15.765842121503432 13.976336440628783 12 45.872093123478365 20.556244767464243 19.326293603506954 14.245368505550438 13 23.247312408744865 39.143935602388765 19.789083917663085 17.819668071203285 14 16.53369250244065 40.722099990059256 24.143415580990315 18.60079192650977 15 16.343726674454537 22.56157369392747 44.84400219960432 16.250697432013666 16 18.672100938164572 17.680382781718002 43.17085489794078 20.476661382176655 17 18.567579510122602 20.96289575495902 24.913564399047758 35.555960335870616 18 23.491751196480173 25.33159265028762 29.127978702681645 22.04867745055056 19 33.03658594747037 25.808575813661104 20.609511047725324 20.545327191143205 20 37.09895863560176 22.962076362125664 21.216585752103214 18.722379250169364 21 26.709907930355058 27.994906663341595 23.31666774884748 21.97851765745587 22 25.65624689351858 25.421059315192153 21.6421988458398 27.28049494544947 23 24.754167784760558 29.839632296029507 21.25726808913109 24.148931830078844 24 23.622877034188676 22.524453934435932 34.494599534681406 19.358069496693986 25 21.048512537687188 24.525818056866783 30.750962614196414 23.67470679124962 26 19.977613222449065 35.723171636366565 23.32465481784024 20.974560323344136 27 21.99069937419303 33.64699338567258 25.307114294957287 19.0551929451771 28 18.19167011911076 29.041959693457443 34.79615448485416 17.97021570257764 29 19.849475352996844 25.275223479914246 32.82415289663411 22.0511482704548 30 22.926852813258307 30.13337255999352 26.31808186228569 20.621692764462484 31 31.885930864160645 26.771161279608897 20.863545810437547 20.47936204579291 32 34.035429258989616 27.342322903983362 21.395921308408315 17.226326528618703 33 31.36332372395081 28.107874847800367 21.021735745236633 19.507065683012193 34 22.407693328728797 27.52591056896087 25.327340541615218 24.739055560695117 35 24.793068833020268 24.32878453473599 27.44253476242492 23.43561186981882 36 31.27759201936663 26.903896023301556 22.25398534631414 19.564526611017673 37 23.80318942626987 33.56516902419278 24.547308443940832 18.084333105596524 38 23.582482001800827 32.469676431768306 20.968182160335523 22.97965940609534 39 24.70521107409989 31.649134379850064 22.85387743469135 20.7917771113587 40 27.135061336667597 24.81524875123038 23.71056241032504 24.33912750177698 41 18.257807647245063 25.205925600739636 25.904535563430258 30.631731188585043 42 23.15405332259197 26.215743949507935 21.760453435675075 28.869749292225023 43 23.636495274125977 25.93073774660076 23.99269556683194 26.440071412441323 44 22.48290968348797 29.64501213287495 25.313837223533923 22.558240960103156 45 20.590893707051546 34.60768264099619 20.531191802853854 24.27023184909841 46 22.58513267440972 32.44899049768634 23.128310826845517 21.83756600105843 47 23.981777990510903 26.329056899534738 24.987861378958844 24.701303730995516 48 25.221095285733085 20.997946921042367 29.881751156257526 23.899206636967026 49 21.46562141407896 24.428191940185474 29.897897677027064 24.2082889687085 50 20.204698809926718 31.8813339899202 25.066238084758318 22.84772911539476 51 19.96738517726409 32.527769429981845 22.704823787445132 24.80002160530893 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 227.0 1 642.0 2 1057.0 3 2949.5 4 4842.0 5 3615.5 6 2389.0 7 2574.0 8 2759.0 9 2881.0 10 3003.0 11 2958.0 12 2913.0 13 3014.0 14 3115.0 15 2795.5 16 2476.0 17 2520.5 18 2565.0 19 2617.0 20 2669.0 21 2951.5 22 3234.0 23 3524.0 24 3814.0 25 4479.5 26 8505.5 27 11866.0 28 14860.5 29 17855.0 30 19871.0 31 21887.0 32 26551.0 33 31215.0 34 34543.0 35 37871.0 36 38674.5 37 39478.0 38 49284.5 39 59091.0 40 89199.0 41 119307.0 42 137816.0 43 156325.0 44 158864.0 45 161403.0 46 150906.5 47 140410.0 48 129594.0 49 118778.0 50 114234.5 51 109691.0 52 102943.0 53 96195.0 54 90909.5 55 85624.0 56 87554.0 57 89484.0 58 95560.5 59 101637.0 60 98087.0 61 94537.0 62 81274.5 63 68012.0 64 57761.5 65 47511.0 66 40021.5 67 32532.0 68 27465.0 69 22398.0 70 18346.0 71 14294.0 72 12406.0 73 10518.0 74 8084.0 75 4423.5 76 3197.0 77 2358.0 78 1519.0 79 1281.5 80 1044.0 81 716.5 82 389.0 83 295.0 84 201.0 85 156.0 86 111.0 87 87.0 88 63.0 89 37.0 90 11.0 91 6.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1740313.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.76458681648982 #Duplication Level Percentage of deduplicated Percentage of total 1 78.5540180787183 13.169256558647838 2 8.162945743024292 2.7369682517445346 3 2.56899926378243 1.2920463356753693 4 1.1837006445755254 0.7937700888288542 5 0.6802296668122637 0.570188465221307 6 0.508780836291477 0.5117700300344856 7 0.3157498928876582 0.3705391544128755 8 0.2814141183416927 0.3774233134660198 9 0.22899946133844978 0.34551732154840603 >10 3.9157390261238434 17.009838118648595 >50 2.055097681382306 25.20683732006259 >100 1.5375703350665404 36.445919926257204 >500 0.0045035011034411715 0.5259787020800205 >1k 0.0022517505517205857 0.6439464133718913 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2251 0.1293445489403343 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2102 0.12078287066751786 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1801 0.10348713133786853 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05677139686941372 0.0 2 0.0 0.0 0.0 0.2088130123719124 0.0 3 0.0 0.0 0.0 0.29351042025198915 0.0 4 0.0 0.0 0.0 0.4353239905695125 0.0 5 0.0 0.0 0.0 0.7441190176709592 0.0 6 0.0 0.0 0.0 1.0158517462088716 0.0 7 0.0 0.0 0.0 1.1673187524313156 0.0 8 0.0 0.0 0.0 1.5123716251042199 0.0 9 0.0 0.0 0.0 1.619536255834439 0.0 10 0.0 0.0 0.0 1.8041007565880391 0.0 11 0.0 0.0 0.0 2.108241448521042 0.0 12 0.0 0.0 0.0 2.334752426718642 0.0 13 0.0 0.0 0.0 2.4275518254474915 0.0 14 0.0 0.0 0.0 2.4653036551470913 0.0 15 0.0 0.0 0.0 2.525580168624839 0.0 16 0.0 0.0 0.0 2.6816440490877214 0.0 17 0.0 0.0 0.0 2.854831286096237 0.0 18 0.0 0.0 0.0 3.0392808649938257 0.0 19 0.0 0.0 0.0 3.146905183148089 0.0 20 5.746092800547948E-5 0.0 0.0 3.2617695782310423 0.0 21 5.746092800547948E-5 0.0 0.0 3.4274868945988453 0.0 22 5.746092800547948E-5 0.0 0.0 3.601133819031404 0.0 23 1.1492185601095895E-4 0.0 0.0 3.7921914046496235 0.0 24 1.1492185601095895E-4 0.0 0.0 3.93676309951141 0.0 25 1.1492185601095895E-4 0.0 0.0 4.059786946371141 0.0 26 1.1492185601095895E-4 0.0 0.0 4.168043334733465 0.0 27 1.1492185601095895E-4 0.0 0.0 4.274403512471607 0.0 28 1.1492185601095895E-4 0.0 0.0 4.388233610850462 0.0 29 1.1492185601095895E-4 0.0 0.0 4.515509566382599 0.0 30 1.1492185601095895E-4 0.0 0.0 4.662954307644659 0.0 31 1.1492185601095895E-4 0.0 0.0 4.82183377357981 0.0 32 1.1492185601095895E-4 0.0 0.0 4.97105980361004 0.0 33 1.1492185601095895E-4 0.0 0.0 5.10580567978289 0.0 34 1.1492185601095895E-4 0.0 0.0 5.252848194548911 0.0 35 1.1492185601095895E-4 0.0 0.0 5.434424727046227 0.0 36 1.1492185601095895E-4 0.0 0.0 5.612783447575235 0.0 37 1.1492185601095895E-4 0.0 0.0 5.791372011816265 0.0 38 1.1492185601095895E-4 0.0 0.0 5.952837219511663 0.0 39 1.1492185601095895E-4 0.0 0.0 6.121312660423729 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTA 25 3.8916347E-5 45.000004 38 CTATCGA 25 3.8916347E-5 45.000004 25 CGCATTA 50 2.1827873E-11 45.000004 23 GACCGTT 25 3.8916347E-5 45.000004 34 TAGCGAT 35 1.212411E-7 45.000004 24 TATGCGT 30 2.1661472E-6 45.000004 20 TCTAGCG 35 1.212411E-7 45.000004 1 GCCGATC 35 1.212411E-7 45.000004 9 TTAACGA 25 3.8916347E-5 45.000004 23 TATAGCG 60 0.0 45.000004 1 CGTCGCA 30 2.1661472E-6 45.000004 32 CCGAATA 25 3.8916347E-5 45.000004 22 AACGTAT 20 7.034289E-4 45.0 40 ACCGGGT 40 6.8193913E-9 45.0 4 CATGCGA 20 7.034289E-4 45.0 28 TCCGATT 20 7.034289E-4 45.0 26 CATTCGA 20 7.034289E-4 45.0 28 CCCAACG 20 7.034289E-4 45.0 23 CTACGTC 20 7.034289E-4 45.0 30 AGTTATC 20 7.034289E-4 45.0 21 >>END_MODULE