##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545285_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3160799 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.234123397280246 31.0 31.0 33.0 30.0 34.0 2 31.54898935364128 31.0 31.0 34.0 30.0 34.0 3 31.647211037462363 31.0 31.0 34.0 30.0 34.0 4 30.276679092849623 35.0 33.0 37.0 0.0 37.0 5 32.827966915960175 35.0 33.0 37.0 19.0 37.0 6 34.4399197797772 35.0 33.0 37.0 30.0 37.0 7 35.43963440889471 36.0 35.0 37.0 33.0 37.0 8 35.6353497960484 37.0 35.0 37.0 35.0 37.0 9 37.64679690166948 39.0 37.0 39.0 35.0 39.0 10 37.09837987167169 39.0 37.0 39.0 33.0 39.0 11 36.66604614845803 39.0 35.0 39.0 32.0 39.0 12 35.600603834663325 37.0 35.0 39.0 31.0 39.0 13 35.15054895929795 37.0 35.0 39.0 30.0 39.0 14 35.984706714979346 38.0 35.0 40.0 30.0 41.0 15 36.309316410186156 38.0 35.0 40.0 31.0 41.0 16 36.48644820502664 38.0 35.0 40.0 32.0 41.0 17 36.42342268521345 38.0 35.0 40.0 31.0 41.0 18 36.38263806081943 37.0 35.0 40.0 31.0 41.0 19 36.39236471537735 37.0 35.0 40.0 31.0 41.0 20 36.292657647639096 37.0 35.0 40.0 31.0 41.0 21 36.12607476780396 37.0 34.0 40.0 31.0 41.0 22 35.98839533927972 37.0 34.0 40.0 30.0 41.0 23 35.95736679238382 37.0 34.0 40.0 30.0 41.0 24 35.88011069353034 36.0 34.0 40.0 30.0 41.0 25 35.75939248272351 36.0 34.0 40.0 30.0 41.0 26 35.58494102282366 36.0 34.0 40.0 30.0 41.0 27 35.57519190559096 36.0 34.0 40.0 30.0 41.0 28 35.60256536401081 36.0 34.0 40.0 30.0 41.0 29 35.631764626602326 36.0 34.0 40.0 30.0 41.0 30 35.59581042641433 36.0 34.0 40.0 30.0 41.0 31 35.494289576781064 36.0 34.0 40.0 30.0 41.0 32 35.397121740420694 36.0 34.0 40.0 29.0 41.0 33 35.25145445819238 36.0 34.0 40.0 29.0 41.0 34 35.15730737702714 36.0 34.0 40.0 29.0 41.0 35 35.04249748244036 36.0 34.0 40.0 28.0 41.0 36 34.89750724421262 36.0 33.0 40.0 27.0 41.0 37 34.837184522014844 35.0 33.0 40.0 27.0 41.0 38 34.827157310540784 35.0 33.0 40.0 27.0 41.0 39 34.77182636415666 35.0 33.0 40.0 27.0 41.0 40 34.62213573213608 35.0 33.0 40.0 26.0 41.0 41 34.57934623492351 35.0 33.0 40.0 26.0 41.0 42 34.55629162120084 35.0 33.0 40.0 27.0 41.0 43 34.4833201984688 35.0 33.0 40.0 27.0 41.0 44 34.41885928209924 35.0 33.0 40.0 27.0 41.0 45 34.32244252165354 35.0 33.0 39.0 26.0 41.0 46 34.251132387728546 35.0 33.0 39.0 26.0 41.0 47 34.17884528563822 35.0 33.0 39.0 26.0 41.0 48 34.09307488391384 35.0 33.0 39.0 26.0 41.0 49 34.064770015429644 35.0 33.0 39.0 26.0 41.0 50 33.893248510898665 35.0 33.0 39.0 26.0 40.0 51 33.824882569249105 35.0 33.0 39.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 12.0 14 22.0 15 85.0 16 276.0 17 639.0 18 1461.0 19 2820.0 20 5070.0 21 8326.0 22 12617.0 23 18240.0 24 25920.0 25 35119.0 26 45216.0 27 55649.0 28 66934.0 29 81411.0 30 100590.0 31 125468.0 32 160528.0 33 232130.0 34 346049.0 35 463649.0 36 233811.0 37 293414.0 38 377943.0 39 467123.0 40 272.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.543796995633066 25.137441513996933 29.208437486850634 12.110324003519363 2 28.447996851429018 27.143105271799943 30.60529948282064 13.80359839395039 3 29.877635370044093 25.744123558631856 30.143707334759345 14.23453373656471 4 22.807998863578483 38.61188262841136 25.779810737728027 12.800307770282135 5 24.104854500396893 32.52886374616038 28.988967662923205 14.377314090519516 6 22.484441433953883 41.45470812917873 24.947331355141532 11.113519081725855 7 88.97082668021599 4.684385182354209 4.327513391392493 2.0172747460373155 8 90.76458199335042 3.2594922992572446 3.901988073268816 2.073937634123524 9 86.89805963618693 4.866870686810518 5.310049769061557 2.925019907940998 10 57.97100669798997 22.205334790348896 9.674136191513602 10.149522320147533 11 51.45309777685958 20.478176562318577 15.905820015761837 12.162905645059999 12 47.73859394412615 20.35912438595431 18.35871246479134 13.543569205128197 13 23.613681224272725 40.31872953642417 18.918855643778677 17.148733595524423 14 14.834097327922466 42.81873032736343 24.232543733404118 18.11462861130999 15 14.936919430814804 23.658226923002694 45.82145210752092 15.583401538661585 16 16.64110878293748 18.25813662937757 45.76225821382505 19.3384963738599 17 17.80119520412402 19.536136274404033 26.48311392151162 36.179554599960326 18 21.749152666778244 25.668731229034176 29.705020787465447 22.877095316722134 19 33.0732514152276 25.661043299494846 20.759118184990566 20.506587100286986 20 36.7131854951865 23.43670065701742 20.791135405952733 19.058978441843344 21 26.109189480254834 28.576382110978898 23.225962802443306 22.088465606322956 22 23.746052817657816 27.056829618080748 22.075494202573463 27.12162336168798 23 24.192395656920922 31.214797271196304 21.47732266430102 23.115484407581754 24 23.630006210455015 22.977101675873726 34.01054606762404 19.382346046047218 25 20.426797148442528 24.888865125558443 32.08748800540623 22.5968497205928 26 19.271456362774096 36.92781477088546 22.692205356936647 21.108523509403792 27 21.47156462653905 34.57600435839166 25.379342375139956 18.573088639929335 28 18.296987565485814 30.227135607167682 34.3473280015591 17.128548825787405 29 18.384528722009847 26.185341111535404 33.515291544954295 21.914838621500447 30 21.877601201468362 30.13522846596699 26.63019698500284 21.3569733475618 31 30.986975128757 27.189043023615234 20.518577739362737 21.30540410826503 32 34.53484387966461 27.30154622296451 20.907276925865897 17.25633297150499 33 30.93018569039031 28.077679093166 21.092894549764157 19.899240666679532 34 21.482005024678887 28.47960278397962 25.0233247985715 25.01506739276999 35 22.50396181471837 25.110454666683964 27.870294821024682 24.515288697572988 36 30.408671984520367 27.605203620983175 21.722482195166474 20.26364219932998 37 23.549615144778265 33.5965368250243 24.53003180524924 18.323816224948185 38 22.332739285225035 33.33388171788209 21.298412205268352 23.034966791624523 39 23.32369125654621 31.838310503135443 23.63063896185743 21.20735927846092 40 26.499185807132942 24.744724356088444 24.054455851194586 24.701633985584024 41 17.712894745917094 24.993585482658023 26.38522727955811 30.908292491866774 42 23.703785023976533 27.25140067432317 21.12162146343377 27.923192838266527 43 23.673697694791727 27.717295531920882 22.79961490749649 25.8093918657909 44 21.774842373716265 30.510703148159692 25.17303378038275 22.541420697741298 45 19.677714400694253 34.88921630258678 19.93609843587017 25.496970860848794 46 22.04021831188886 34.05891991233862 21.916072486735157 21.98478928903736 47 23.27576033781332 26.516459920418857 25.117984408372696 25.08979533339513 48 24.370958102682263 21.706979785807324 29.843972995435646 24.078089116074764 49 21.014844664276342 24.790503920053126 29.760829461158394 24.433821954512133 50 18.804359277511793 33.180249677375876 24.308885190105414 23.706505855006917 51 18.373613760318197 33.66553836545759 22.367414062077344 25.593433812146866 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 575.0 1 1200.5 2 1826.0 3 4767.5 4 7709.0 5 5766.5 6 3824.0 7 4141.5 8 4459.0 9 4905.0 10 5351.0 11 5413.5 12 5476.0 13 5411.0 14 5346.0 15 5504.5 16 5663.0 17 5945.5 18 6228.0 19 6478.0 20 6728.0 21 7499.0 22 8270.0 23 9387.0 24 10504.0 25 10937.0 26 16131.0 27 20892.0 28 31618.5 29 42345.0 30 43525.0 31 44705.0 32 48365.0 33 52025.0 34 56560.5 35 61096.0 36 65909.0 37 70722.0 38 89308.0 39 107894.0 40 163233.0 41 218572.0 42 258131.5 43 297691.0 44 300464.0 45 303237.0 46 285094.0 47 266951.0 48 250927.0 49 234903.0 50 220939.0 51 206975.0 52 191623.0 53 176271.0 54 168968.0 55 161665.0 56 162372.0 57 163079.0 58 164152.5 59 165226.0 60 160131.5 61 155037.0 62 136843.5 63 118650.0 64 98527.0 65 78404.0 66 62162.5 67 45921.0 68 38554.5 69 31188.0 70 27598.5 71 24009.0 72 19208.0 73 14407.0 74 10855.5 75 5854.5 76 4405.0 77 3287.0 78 2169.0 79 1695.5 80 1222.0 81 766.5 82 311.0 83 208.0 84 105.0 85 76.5 86 48.0 87 34.5 88 21.0 89 16.0 90 11.0 91 9.5 92 8.0 93 4.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3160799.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.923946183642087 #Duplication Level Percentage of deduplicated Percentage of total 1 77.58713923550434 11.579062904934121 2 9.562705824564281 2.854266141915961 3 3.4459023801222766 1.5427938502508711 4 1.7142946301842523 1.0233616321510557 5 1.0074214511226505 0.7517351760400527 6 0.6437551795203957 0.5764420592761943 7 0.4346432058696722 0.454061426943926 8 0.31413432647247813 0.3750499026167934 9 0.23777844689587888 0.3193733470593685 >10 2.0108478046906706 7.023362179508363 >50 0.9752459508323131 10.742999900286717 >100 2.0372038710510783 59.135019899805194 >500 0.024762105353206432 2.3337149579437657 >1k 0.00393416627107018 1.0827075256630674 >5k 2.3142154535706942E-4 0.2060490956045124 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 5966 0.1887497433402124 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3481 0.1101303815902245 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3208 0.10149332494726808 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06615415912242442 0.0 2 0.0 0.0 0.0 0.21874215981465445 0.0 3 6.327514024143895E-5 0.0 0.0 0.31144024026836253 0.0 4 6.327514024143895E-5 0.0 0.0 0.5352444113023321 0.0 5 6.327514024143895E-5 0.0 0.0 0.9017972987209879 0.0 6 6.327514024143895E-5 0.0 0.0 1.2556002453809938 0.0 7 6.327514024143895E-5 0.0 0.0 1.4324542623558156 0.0 8 6.327514024143895E-5 0.0 0.0 1.8683883410492095 0.0 9 6.327514024143895E-5 0.0 0.0 1.989212221340237 0.0 10 6.327514024143895E-5 0.0 0.0 2.2156106731241056 0.0 11 9.491271036215843E-5 0.0 0.0 2.5402121425626873 0.0 12 9.491271036215843E-5 0.0 0.0 2.814098587097756 0.0 13 9.491271036215843E-5 0.0 0.0 2.923184928873997 0.0 14 9.491271036215843E-5 0.0 0.0 2.9672877016222796 0.0 15 9.491271036215843E-5 0.0 0.0 3.0418574543968155 0.0 16 9.491271036215843E-5 0.0 0.0 3.202165022198501 0.0 17 9.491271036215843E-5 0.0 0.0 3.3728180754296617 0.0 18 9.491271036215843E-5 0.0 0.0 3.5772916911198718 0.0 19 9.491271036215843E-5 0.0 0.0 3.7086192446909783 0.0 20 9.491271036215843E-5 0.0 0.0 3.8376688932133933 0.0 21 9.491271036215843E-5 0.0 0.0 4.018857257294754 0.0 22 9.491271036215843E-5 0.0 0.0 4.201247849040701 0.0 23 9.491271036215843E-5 0.0 0.0 4.3973058710788 0.0 24 9.491271036215843E-5 0.0 0.0 4.540940439426866 0.0 25 9.491271036215843E-5 0.0 0.0 4.663188010373326 0.0 26 9.491271036215843E-5 0.0 0.0 4.78075322094192 0.0 27 9.491271036215843E-5 0.0 0.0 4.889618099727316 0.0 28 9.491271036215843E-5 0.0 0.0 5.005949445061201 0.0 29 9.491271036215843E-5 0.0 0.0 5.131076034888647 0.0 30 9.491271036215843E-5 0.0 0.0 5.285056088666188 0.0 31 9.491271036215843E-5 0.0 0.0 5.4531464987175715 0.0 32 9.491271036215843E-5 0.0 0.0 5.6022860042666425 0.0 33 9.491271036215843E-5 0.0 0.0 5.74158622550817 0.0 34 9.491271036215843E-5 0.0 0.0 5.891263569749294 0.0 35 9.491271036215843E-5 0.0 0.0 6.077640495330453 0.0 36 9.491271036215843E-5 0.0 0.0 6.258860496981934 0.0 37 1.265502804828779E-4 0.0 0.0 6.441662377139451 0.0 38 1.5818785060359739E-4 0.0 0.0 6.5956424309169925 0.0 39 1.5818785060359739E-4 0.0 0.0 6.764650330501876 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGTA 20 7.035162E-4 45.000004 26 ATCTCGC 20 7.035162E-4 45.000004 13 CGTATCA 20 7.035162E-4 45.000004 30 CCGTATC 20 7.035162E-4 45.000004 29 CGTACGT 20 7.035162E-4 45.000004 13 TCCGTCG 40 6.8212103E-9 45.000004 12 CGACTTA 60 0.0 45.000004 38 TAGTCCG 35 1.2128294E-7 45.000004 40 TACCGAA 20 7.035162E-4 45.000004 25 CTATACG 45 3.8562575E-10 45.0 1 TTATCCG 25 3.892361E-5 45.0 1 CGCTAAG 50 2.1827873E-11 45.0 22 GTCGTAC 25 3.892361E-5 45.0 20 CGACTAT 25 3.892361E-5 45.0 34 CGATATC 25 3.892361E-5 45.0 10 TCGCGAC 25 3.892361E-5 45.0 38 ACGACAC 25 3.892361E-5 45.0 15 ACGGTAC 25 3.892361E-5 45.0 13 GCGATAT 250 0.0 43.2 9 TCATGCA 960 0.0 42.42188 24 >>END_MODULE