##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545284_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2278566 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.22565596081044 31.0 31.0 33.0 30.0 34.0 2 31.544226939224057 31.0 31.0 34.0 30.0 34.0 3 31.646229690077003 31.0 31.0 34.0 30.0 34.0 4 30.301777521476225 35.0 33.0 37.0 0.0 37.0 5 32.83548293093112 35.0 33.0 37.0 19.0 37.0 6 34.453291675553835 35.0 33.0 37.0 30.0 37.0 7 35.4588486793887 36.0 35.0 37.0 33.0 37.0 8 35.64221356765615 37.0 35.0 37.0 35.0 37.0 9 37.647683674732264 39.0 37.0 39.0 35.0 39.0 10 37.0931704414092 39.0 37.0 39.0 33.0 39.0 11 36.65055170664356 39.0 35.0 39.0 32.0 39.0 12 35.5169303851633 37.0 35.0 39.0 31.0 39.0 13 35.05785744191741 37.0 34.0 39.0 30.0 39.0 14 35.86401140015255 37.0 34.0 40.0 30.0 41.0 15 36.1813482690429 37.0 35.0 40.0 31.0 41.0 16 36.37961419594605 37.0 35.0 40.0 31.0 41.0 17 36.307551767207976 37.0 35.0 40.0 31.0 41.0 18 36.28187070288945 37.0 35.0 40.0 31.0 41.0 19 36.27634924772862 37.0 35.0 40.0 31.0 41.0 20 36.157919498491594 37.0 35.0 40.0 31.0 41.0 21 36.00113887418666 37.0 34.0 40.0 30.0 41.0 22 35.84758132966085 36.0 34.0 40.0 30.0 41.0 23 35.79680421809155 36.0 34.0 40.0 30.0 41.0 24 35.73046644249058 36.0 34.0 40.0 30.0 41.0 25 35.59543546247947 36.0 34.0 40.0 30.0 41.0 26 35.42860334087316 36.0 34.0 40.0 29.0 41.0 27 35.412573083246215 36.0 34.0 40.0 29.0 41.0 28 35.43339407328995 36.0 34.0 40.0 29.0 41.0 29 35.498461312948585 36.0 34.0 40.0 30.0 41.0 30 35.445783883372265 36.0 34.0 40.0 29.0 41.0 31 35.34933462537403 36.0 34.0 40.0 29.0 41.0 32 35.23013158275863 35.0 34.0 40.0 29.0 41.0 33 35.08862898858317 35.0 34.0 40.0 29.0 41.0 34 34.98289231033905 35.0 34.0 40.0 28.0 41.0 35 34.87064320278631 35.0 34.0 40.0 27.0 41.0 36 34.69412384806935 35.0 33.0 40.0 26.0 41.0 37 34.64593652323435 35.0 33.0 40.0 27.0 41.0 38 34.61670893009024 35.0 33.0 40.0 27.0 41.0 39 34.569771953061704 35.0 33.0 40.0 27.0 41.0 40 34.430468987951194 35.0 33.0 40.0 26.0 41.0 41 34.430941214781576 35.0 33.0 40.0 26.0 41.0 42 34.383431070243304 35.0 33.0 40.0 26.0 41.0 43 34.311419111844906 35.0 33.0 39.0 26.0 41.0 44 34.22902035754066 35.0 33.0 39.0 26.0 41.0 45 34.12552807335842 35.0 33.0 39.0 26.0 41.0 46 34.058447725455395 35.0 33.0 39.0 26.0 41.0 47 34.0006253933395 35.0 33.0 39.0 26.0 41.0 48 33.910046933027175 35.0 33.0 39.0 25.0 41.0 49 33.8925332862862 35.0 33.0 39.0 26.0 41.0 50 33.720896827215014 35.0 33.0 38.0 24.0 40.0 51 33.636771109548725 35.0 32.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 2.0 13 5.0 14 24.0 15 66.0 16 186.0 17 445.0 18 1094.0 19 2246.0 20 3937.0 21 6352.0 22 9642.0 23 13729.0 24 19322.0 25 25993.0 26 34024.0 27 41734.0 28 50186.0 29 60363.0 30 74637.0 31 92684.0 32 118325.0 33 172139.0 34 258454.0 35 343548.0 36 167225.0 37 207425.0 38 263604.0 39 310988.0 40 184.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.391249584168285 24.715149791579442 30.56014177337852 12.333458850873752 2 27.66112546224248 27.419526140563843 31.406112440894844 13.51323595629883 3 29.065780846374427 26.415254155464446 30.542235774605608 13.976729223555518 4 22.639151115218958 38.78829930754694 25.65819906028616 12.91435051694794 5 23.96463389693342 32.4029235931722 29.28885974775363 14.34358276214075 6 22.5542731700552 41.481045534779334 25.10105039748684 10.863630897678627 7 89.50629474853922 4.534079767713553 4.0749313383944115 1.8846941453528228 8 91.68591122662237 2.9605901255438725 3.455594439660734 1.8979042081730353 9 88.14258617042474 4.473822570862551 4.939949073232901 2.4436421854798147 10 59.55254313458552 21.89425278881542 8.923507153183188 9.629696923415867 11 52.2895101568267 19.328911253832455 14.962173577592223 13.419405011748617 12 46.25970895730034 21.745518892145324 18.26148551325702 13.733286637297319 13 22.714110541454584 41.36786031214369 19.21756929577638 16.70045985062535 14 15.763905895198999 42.92462891134161 24.956178578983447 16.355286614475947 15 15.430143344542138 22.883471446515045 46.326022594912764 15.360362614030052 16 17.728079853732567 17.280824869676806 45.12496017231891 19.86613510427172 17 17.976788910218094 19.129926453743277 26.003196747427985 36.890087888610644 18 23.45304020160048 23.944445761062003 30.289445203693905 22.313068833643616 19 32.57386443930086 24.918567204109955 20.95787438239665 21.54969397419254 20 35.611520579171284 23.3573659924707 21.191222900719136 19.839890527638875 21 25.676895029593172 27.98027355801851 23.914295219010555 22.428536193377766 22 25.52083196185671 25.648456090365606 21.811481431742596 27.019230516035087 23 23.886119603294354 30.527533545220987 21.73059722650123 23.85574962498343 24 23.50008733563127 22.220422844894554 35.020315408901915 19.259174410572264 25 20.33581647404552 24.519368760878553 32.25717402963092 22.88764073544501 26 20.27200440979107 34.81496695728804 23.600325818958066 21.312702813962815 27 20.753272014064986 33.08194715448225 25.5702490074898 20.594531823962967 28 17.177514278717403 29.378389741618193 35.96156530028097 17.482530679383437 29 19.02108606904518 24.138866286954162 34.562132499124445 22.277915144876207 30 20.960639279265994 29.971394289215237 27.518404119081914 21.54956231243686 31 31.874564967615598 25.89391749021095 20.750463229943744 21.48105431222971 32 34.00230671395957 26.166501211727024 21.80024629525763 18.030945779055774 33 30.198861915783876 27.38191476569035 21.968466131768842 20.450757186756935 34 21.387223367679496 26.992020419860562 26.338144253885996 25.28261195857395 35 22.767345778002483 24.85291187527594 28.636431861091584 23.743310485629998 36 31.207347077065133 24.92111266471983 23.48608730227696 20.385452955938078 37 23.719743031362707 31.837216916253468 25.810575598863494 18.632464453520328 38 22.76493197914829 32.6158206521119 20.926494997292156 23.692752371447657 39 24.217819453112178 30.891051652662245 23.827398460259655 21.063730433965926 40 25.31912615215008 25.55308909199909 23.372463207122372 25.755321548728453 41 18.26438207188205 24.540171318276496 25.15160851166918 32.04383809817227 42 23.110456313312845 26.132137493493712 21.839876483718268 28.917529709475172 43 23.350519581175178 26.170626613405094 24.122408567493768 26.356445237925957 44 21.74608942641995 29.682923382513387 26.005259448267026 22.565727742799638 45 19.385920794043273 34.60457147170633 21.062852688928036 24.946655045322366 46 22.738599628011652 32.37088589928929 23.89551147519975 20.995002997499306 47 23.694551748775325 25.558926096501043 26.024525951848666 24.721996202874966 48 24.57475447276928 21.19275895453544 29.63091698901853 24.601569583676753 49 21.621230194780402 22.575251276460722 30.4279972579245 25.375521270834376 50 19.22946274103976 32.017593521539425 25.446179746384352 23.306763991036465 51 18.258896165395253 33.824914441802434 22.789772163720514 25.1264172290818 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 272.0 1 763.0 2 1254.0 3 3417.5 4 5581.0 5 4284.0 6 2987.0 7 3189.0 8 3391.0 9 3616.0 10 3841.0 11 3893.5 12 3946.0 13 3978.0 14 4010.0 15 3708.5 16 3407.0 17 3544.5 18 3682.0 19 3344.0 20 3006.0 21 3679.0 22 4352.0 23 4547.0 24 4742.0 25 6862.5 26 10930.0 27 12877.0 28 16748.5 29 20620.0 30 23955.0 31 27290.0 32 31288.0 33 35286.0 34 38527.5 35 41769.0 36 48149.5 37 54530.0 38 67753.0 39 80976.0 40 121247.5 41 161519.0 42 188362.0 43 215205.0 44 218758.0 45 222311.0 46 204719.0 47 187127.0 48 179377.0 49 171627.0 50 162994.0 51 154361.0 52 147062.0 53 139763.0 54 129615.0 55 119467.0 56 116013.0 57 112559.0 58 116186.0 59 119813.0 60 114258.5 61 108704.0 62 92792.5 63 76881.0 64 66679.5 65 56478.0 66 48073.5 67 39669.0 68 31490.5 69 23312.0 70 21269.5 71 19227.0 72 15366.5 73 11506.0 74 8840.5 75 4634.5 76 3094.0 77 2548.0 78 2002.0 79 1251.5 80 501.0 81 372.0 82 243.0 83 164.5 84 86.0 85 104.5 86 123.0 87 65.0 88 7.0 89 5.0 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2278566.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.072586931169948 #Duplication Level Percentage of deduplicated Percentage of total 1 78.87474719899447 12.677212310298922 2 8.540277801821006 2.7452871477221823 3 2.9245502114402 1.410152625238322 4 1.3680087300054316 0.8794975694244679 5 0.8137959322491511 0.6539902932653485 6 0.506332130696627 0.48828403119996233 7 0.3448010463452008 0.38792913539391194 8 0.2679450041506169 0.34452554975867866 9 0.2037197487575958 0.2946873034352303 >10 2.7218046583576405 11.121445668406183 >50 1.4999471195128844 17.568347302022268 >100 1.9218708965731757 49.64729758737389 >500 0.009521577440806627 0.9950712444887448 >1k 0.0026779436552268636 0.7862722319719063 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3415 0.14987496521935287 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2471 0.10844539943104567 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2445 0.10730433088179145 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05358633456305413 0.0 2 0.0 0.0 0.0 0.18112268856816086 0.0 3 0.0 0.0 0.0 0.25963698220723036 0.0 4 0.0 0.0 0.0 0.4289540000157994 0.0 5 0.0 0.0 0.0 0.7128167452687348 0.0 6 0.0 0.0 0.0 1.0026042695274133 0.0 7 0.0 0.0 0.0 1.1668742533681271 0.0 8 0.0 0.0 0.0 1.5563297266789726 0.0 9 0.0 0.0 0.0 1.6774585419074979 0.0 10 4.388725189439323E-5 0.0 0.0 1.8707379992504058 0.0 11 4.388725189439323E-5 0.0 0.0 2.140776260156607 0.0 12 4.388725189439323E-5 0.0 0.0 2.365303440848323 0.0 13 8.777450378878646E-5 0.0 0.0 2.460845988222417 0.0 14 8.777450378878646E-5 0.0 0.0 2.4971846327909746 0.0 15 8.777450378878646E-5 0.0 0.0 2.5573979423900823 0.0 16 8.777450378878646E-5 0.0 0.0 2.688489163798635 0.0 17 8.777450378878646E-5 0.0 0.0 2.844947216802147 0.0 18 8.777450378878646E-5 0.0 0.0 3.0302830815521693 0.0 19 8.777450378878646E-5 0.0 0.0 3.1372802016706998 0.0 20 1.3166175568317967E-4 0.0 0.0 3.2516064928555943 0.0 21 1.3166175568317967E-4 0.0 0.0 3.4055629725011256 0.0 22 1.3166175568317967E-4 0.0 0.0 3.5664975251978657 0.0 23 1.3166175568317967E-4 0.0 0.0 3.7367800625481116 0.0 24 1.3166175568317967E-4 0.0 0.0 3.8687051417426574 0.0 25 1.3166175568317967E-4 0.0 0.0 3.976536119647182 0.0 26 1.3166175568317967E-4 0.0 0.0 4.080856117400154 0.0 27 1.3166175568317967E-4 0.0 0.0 4.180743502711794 0.0 28 1.3166175568317967E-4 0.0 0.0 4.284624627945822 0.0 29 1.3166175568317967E-4 0.0 0.0 4.399345904397766 0.0 30 1.3166175568317967E-4 0.0 0.0 4.54373496313032 0.0 31 1.3166175568317967E-4 0.0 0.0 4.689879511938649 0.0 32 1.3166175568317967E-4 0.0 0.0 4.819303017775215 0.0 33 1.3166175568317967E-4 0.0 0.0 4.950306464679978 0.0 34 1.3166175568317967E-4 0.0 0.0 5.088858518910578 0.0 35 1.7554900757757292E-4 0.0 0.0 5.265065835266567 0.0 36 1.7554900757757292E-4 0.0 0.0 5.424903206665947 0.0 37 1.7554900757757292E-4 0.0 0.0 5.579693544097472 0.0 38 1.7554900757757292E-4 0.0 0.0 5.724828686112231 0.0 39 1.7554900757757292E-4 0.0 0.0 5.872289852477391 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACCGA 25 3.8920163E-5 45.0 16 GTCGATC 35 1.2126293E-7 45.0 10 CGACGAA 25 3.8920163E-5 45.0 10 CGCGAAA 20 7.0347486E-4 45.0 26 CGTTCGC 20 7.0347486E-4 45.0 41 TAGTTCG 25 3.8920163E-5 45.0 1 CGTTACA 25 3.8920163E-5 45.0 31 GGGCGTA 20 7.0347486E-4 45.0 7 CGCTAAC 20 7.0347486E-4 45.0 25 GAACCGT 25 3.8920163E-5 45.0 18 CAATCGA 25 3.8920163E-5 45.0 22 TCGACAC 20 7.0347486E-4 45.0 34 TATCGTC 25 3.8920163E-5 45.0 33 TCGAATC 45 3.8562575E-10 45.0 17 TACCGTA 20 7.0347486E-4 45.0 45 TCTAGCG 60 0.0 44.999996 1 TACGTAG 140 0.0 43.392857 1 CGGGATA 190 0.0 41.44737 6 TGCGTAG 115 0.0 41.08696 1 CGTTGAT 370 0.0 40.743244 25 >>END_MODULE