SRR1545283_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545283_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2604469
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2925	0.1123069616109848	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	2686	0.10313042696995049	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	2650	0.10174818744243068	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTATCG	30	2.1665655E-6	45.000004	43
TACGACA	30	2.1665655E-6	45.000004	23
ATTTCGC	60	0.0	45.000004	27
CGTATCA	20	7.034935E-4	45.0	41
CGTTACA	20	7.034935E-4	45.0	34
CCCCCGT	20	7.034935E-4	45.0	41
CTATTCG	45	3.8562575E-10	45.0	26
CGTCGTA	20	7.034935E-4	45.0	22
CGGTCGA	35	1.2127202E-7	45.0	36
CAATACG	45	3.8562575E-10	45.0	1
CCGTTGA	35	1.2127202E-7	45.0	22
AGTCGAC	20	7.034935E-4	45.0	37
GTCGAAC	25	3.8921724E-5	44.999996	29
AACGCAT	25	3.8921724E-5	44.999996	33
ACTCGAT	50	2.1827873E-11	44.999996	31
TTACGTA	25	3.8921724E-5	44.999996	1
CGTATGG	140	0.0	43.392857	2
CGATCAT	105	0.0	42.857147	10
CGTTAGG	420	0.0	40.714287	2
TGACGTT	50	1.0822987E-9	40.499996	28