##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545283_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2604469 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.283459315507308 31.0 31.0 33.0 30.0 34.0 2 31.60379908534139 31.0 31.0 34.0 30.0 34.0 3 31.695928421493978 31.0 31.0 34.0 30.0 34.0 4 30.29391826126554 35.0 33.0 37.0 0.0 37.0 5 32.86911919473797 35.0 33.0 37.0 19.0 37.0 6 34.494420551751624 35.0 33.0 37.0 30.0 37.0 7 35.50130487250952 36.0 35.0 37.0 33.0 37.0 8 35.6867779958218 37.0 35.0 37.0 35.0 37.0 9 37.69675354170082 39.0 37.0 39.0 35.0 39.0 10 37.161714729566754 39.0 37.0 39.0 33.0 39.0 11 36.72527183084153 39.0 35.0 39.0 32.0 39.0 12 35.65291927068435 37.0 35.0 39.0 31.0 39.0 13 35.21370651752814 37.0 35.0 39.0 30.0 39.0 14 36.06557075549757 38.0 35.0 40.0 30.0 41.0 15 36.3564834137016 38.0 35.0 40.0 31.0 41.0 16 36.520685022551625 38.0 35.0 40.0 32.0 41.0 17 36.460087641665154 38.0 35.0 40.0 31.0 41.0 18 36.38949436526217 37.0 35.0 40.0 31.0 41.0 19 36.4017394716543 37.0 35.0 40.0 31.0 41.0 20 36.32486660428671 37.0 35.0 40.0 31.0 41.0 21 36.177272219404415 37.0 34.0 40.0 31.0 41.0 22 36.03819051023452 37.0 34.0 40.0 30.0 41.0 23 35.993734231430665 37.0 34.0 40.0 30.0 41.0 24 35.93821926849581 37.0 34.0 40.0 30.0 41.0 25 35.823018050896366 36.0 34.0 40.0 30.0 41.0 26 35.64252943690249 36.0 34.0 40.0 30.0 41.0 27 35.63029623312852 36.0 34.0 40.0 30.0 41.0 28 35.650975304371066 36.0 34.0 40.0 30.0 41.0 29 35.6737753453775 36.0 34.0 40.0 30.0 41.0 30 35.63577105352377 36.0 34.0 40.0 30.0 41.0 31 35.51825343284946 36.0 34.0 40.0 30.0 41.0 32 35.43525801228581 36.0 34.0 40.0 29.0 41.0 33 35.30305832014127 36.0 34.0 40.0 29.0 41.0 34 35.21272090395394 36.0 34.0 40.0 29.0 41.0 35 35.028288683796966 36.0 34.0 40.0 27.0 41.0 36 34.920314659149334 36.0 34.0 40.0 27.0 41.0 37 34.895036185878965 35.0 33.0 40.0 27.0 41.0 38 34.90971019428528 35.0 33.0 40.0 27.0 41.0 39 34.84085969155325 35.0 34.0 40.0 27.0 41.0 40 34.71271687242198 35.0 33.0 40.0 27.0 41.0 41 34.662792300465085 35.0 34.0 40.0 27.0 41.0 42 34.63613350744432 35.0 33.0 40.0 27.0 41.0 43 34.58486432359149 35.0 33.0 40.0 27.0 41.0 44 34.50568273225752 35.0 33.0 40.0 27.0 41.0 45 34.39465472616491 35.0 33.0 39.0 27.0 41.0 46 34.31952079291403 35.0 33.0 39.0 26.0 41.0 47 34.2545778045352 35.0 33.0 39.0 26.0 41.0 48 34.18159095001707 35.0 33.0 39.0 26.0 41.0 49 34.1357493600423 35.0 33.0 39.0 26.0 41.0 50 34.006030019938805 35.0 33.0 39.0 26.0 41.0 51 33.91555437979872 35.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 4.0 11 0.0 12 7.0 13 16.0 14 21.0 15 49.0 16 165.0 17 482.0 18 1113.0 19 2224.0 20 3950.0 21 6406.0 22 9552.0 23 14471.0 24 20139.0 25 27688.0 26 35861.0 27 44620.0 28 53604.0 29 65660.0 30 81417.0 31 101913.0 32 130647.0 33 190509.0 34 287675.0 35 383864.0 36 194878.0 37 244644.0 38 316559.0 39 386110.0 40 221.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.4816306126124 24.89309721098619 30.31247444296707 12.312797733434339 2 28.25616277252676 26.735699292254967 31.426597897690467 13.581540037527803 3 29.90767023911592 25.92175218825795 30.275653117775637 13.894924454850491 4 22.590938882359513 39.08117163229818 25.091026232218542 13.236863253123765 5 24.250509412859206 32.53311903501251 29.137071702523627 14.07929984960466 6 22.39512161596087 41.29225573427827 25.490915806638515 10.82170684312234 7 89.52128053741473 4.287898992078616 4.285864028329767 1.9049564421768888 8 91.78823015363209 2.7784550324845485 3.5723212677900946 1.8609935460932727 9 87.62131551575388 4.788308096583219 5.086449483560757 2.5039269041021415 10 58.827499962564346 22.461776277621272 9.190817782818685 9.519905976995695 11 51.77723367027981 20.014597985232307 15.057387897494653 13.150780446993227 12 47.81688705068096 20.203696031705505 18.111945275601286 13.86747164201225 13 24.327722848688158 38.613129970063 19.505549883680704 17.553597297568142 14 15.403830876850522 41.15195842223501 23.954633362885104 19.489577338029367 15 15.773963905886381 23.350901853698396 46.02323928601185 14.851894954403374 16 19.51061809528161 17.50902007280563 43.88522190127815 19.095139930634613 17 19.247263069746655 19.319945831568738 25.46576672634614 35.96702437233847 18 22.475253113014592 25.252095532717036 30.147066446173866 22.12558490809451 19 33.98132210442896 25.21446790113455 20.35804611227855 20.446163882157936 20 36.495922969326955 24.472742812450445 20.49112506234476 18.54020915587784 21 27.743505489986635 28.421954724744275 22.90501441944596 20.929525365823128 22 24.675317694316963 27.08475316849615 21.885843141154684 26.354085996032207 23 24.67520250768967 30.296617083943023 22.64784107624241 22.380339332124898 24 25.250098964510613 22.084156117811347 33.94787958697147 18.717865330706566 25 22.479131062800136 24.17152978207842 30.72906607834457 22.62027307677688 26 19.598543887448844 35.73619037124266 22.80618429322829 21.859081448080204 27 21.58224958715193 32.66996074823697 26.45990411097233 19.287885553638766 28 18.445333770530574 28.986714758363412 34.04705527307102 18.520896198034993 29 19.314301686831364 26.537847062107478 32.39316728285113 21.754683968210024 30 22.60718019680787 29.59455459059025 26.739001308904044 21.059263903697836 31 31.11302150265563 26.387720491201854 21.330221246634153 21.16903675950837 32 35.40982826057826 26.44988287439781 21.332524979180018 16.80776388584391 33 31.025172501573255 27.3039149246929 21.76520434683615 19.90570822689769 34 22.836708749461025 26.565607039285165 25.54969938210054 25.047984829153275 35 23.143335551315836 24.446403470342705 28.770202294594405 23.64005868374705 36 30.214373832055593 27.776564052019815 21.646600516266464 20.362461599658126 37 23.938776003861058 33.52572059794146 24.294587495570113 18.240915902627368 38 23.532589560482386 32.25037426054985 21.2340020173018 22.983034161665966 39 23.87058552050341 32.1340357669836 23.39770601992191 20.597672692591082 40 28.104922730890635 24.024474854567284 23.109777847231047 24.760824567311033 41 17.79652589452975 24.906766024091667 25.88374060125116 31.412967480127428 42 22.80568515117669 27.467710308704003 21.668601162079486 28.058003378039825 43 23.065622973435275 27.247742246116196 22.818816426688127 26.867818353760402 44 21.504460218186512 29.811758174123014 25.73449712782145 22.949284479869025 45 19.769058491385383 33.30329522063806 20.93866350492173 25.98898278305482 46 22.40506606145053 32.76061262391681 22.954890229063967 21.87943108556869 47 22.9709779613426 26.67856672511748 25.288724880196305 25.06173043334361 48 24.736174629070263 21.3017701496927 29.163526231258658 24.79852898997838 49 21.015070634359635 23.750676241491067 30.4101527029118 24.824100421237496 50 20.190641547278926 31.670371196585563 24.284758236707752 23.854229019427763 51 18.25235777427184 33.12529348592746 22.440735520369024 26.181613219431675 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 369.0 1 966.0 2 1563.0 3 4240.0 4 6917.0 5 5118.0 6 3319.0 7 3520.0 8 3721.0 9 3934.0 10 4147.0 11 4195.5 12 4244.0 13 4200.5 14 4157.0 15 3983.0 16 3809.0 17 4159.0 18 4509.0 19 4578.0 20 4647.0 21 4672.0 22 4697.0 23 5423.0 24 6149.0 25 8713.5 26 13637.5 27 15997.0 28 21775.0 29 27553.0 30 31754.5 31 35956.0 32 39515.5 33 43075.0 34 48398.0 35 53721.0 36 55813.0 37 57905.0 38 76292.5 39 94680.0 40 134115.0 41 173550.0 42 204037.5 43 234525.0 44 236730.5 45 238936.0 46 221533.0 47 204130.0 48 200017.0 49 195904.0 50 180937.5 51 165971.0 52 152015.5 53 138060.0 54 130702.5 55 123345.0 56 129634.5 57 135924.0 58 141902.5 59 147881.0 60 147145.0 61 146409.0 62 127815.0 63 109221.0 64 90702.5 65 72184.0 66 58922.5 67 45661.0 68 38625.0 69 31589.0 70 24956.0 71 18323.0 72 15744.0 73 13165.0 74 11445.5 75 6810.5 76 3895.0 77 2942.0 78 1989.0 79 1456.5 80 924.0 81 642.0 82 360.0 83 301.0 84 242.0 85 166.0 86 90.0 87 60.0 88 30.0 89 22.5 90 15.0 91 8.5 92 2.0 93 3.0 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2604469.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.788253961862203 #Duplication Level Percentage of deduplicated Percentage of total 1 78.51393368814975 12.395979246133166 2 8.892115868047005 2.807819671660618 3 2.997221269403401 1.4196267174370771 4 1.4462729609874105 0.9133649922497464 5 0.8216632397308932 0.6486313949998903 6 0.5080891652878772 0.48131044661013517 7 0.36788225876818925 0.40657529706469764 8 0.26657123883610373 0.3366955534138104 9 0.20591421284838732 0.2925923298126559 >10 2.6194602765499946 10.322766090962139 >50 1.396358385541914 16.044696554757152 >100 1.9526144757574602 52.14309043785067 >500 0.008728837400598632 0.9456066852028298 >1k 0.003174122691126775 0.8412445818454181 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2925 0.1123069616109848 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2686 0.10313042696995049 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2650 0.10174818744243068 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.059858650650094124 0.0 2 0.0 0.0 0.0 0.20077029137225286 0.0 3 0.0 0.0 0.0 0.2828983566323884 0.0 4 0.0 0.0 0.0 0.4605161359186844 0.0 5 0.0 0.0 0.0 0.752207071767796 0.0 6 0.0 0.0 0.0 1.0537272664792707 0.0 7 0.0 0.0 0.0 1.2189432855603195 0.0 8 0.0 0.0 0.0 1.622250063256656 0.0 9 0.0 0.0 0.0 1.7398556097231337 0.0 10 0.0 0.0 0.0 1.9365559735976892 0.0 11 0.0 0.0 0.0 2.2436435219616744 0.0 12 0.0 0.0 0.0 2.487532007484059 0.0 13 3.839554243110592E-5 0.0 0.0 2.5851334763439304 0.0 14 3.839554243110592E-5 0.0 0.0 2.6231834588931564 0.0 15 7.679108486221184E-5 0.0 0.0 2.687649574634983 0.0 16 7.679108486221184E-5 0.0 0.0 2.8326695383972704 0.0 17 7.679108486221184E-5 0.0 0.0 2.9984998861572167 0.0 18 7.679108486221184E-5 0.0 0.0 3.187444350460689 0.0 19 7.679108486221184E-5 0.0 0.0 3.3097341531037614 0.0 20 7.679108486221184E-5 0.0 0.0 3.4370921673477395 0.0 21 7.679108486221184E-5 0.0 0.0 3.607990726708592 0.0 22 7.679108486221184E-5 0.0 0.0 3.776931113405458 0.0 23 7.679108486221184E-5 0.0 0.0 3.9589643800713312 0.0 24 7.679108486221184E-5 0.0 0.0 4.10578893432788 0.0 25 7.679108486221184E-5 0.0 0.0 4.228309110225539 0.0 26 7.679108486221184E-5 0.0 0.0 4.346298612116327 0.0 27 7.679108486221184E-5 0.0 0.0 4.4542284818901665 0.0 28 7.679108486221184E-5 0.0 0.0 4.5702214155745375 0.0 29 7.679108486221184E-5 0.0 0.0 4.696504354630445 0.0 30 7.679108486221184E-5 0.0 0.0 4.85745846850164 0.0 31 7.679108486221184E-5 0.0 0.0 5.012384482211154 0.0 32 7.679108486221184E-5 0.0 0.0 5.164622807950488 0.0 33 7.679108486221184E-5 0.0 0.0 5.307684599048788 0.0 34 7.679108486221184E-5 0.0 0.0 5.463186545894768 0.0 35 7.679108486221184E-5 0.0 0.0 5.646256492206281 0.0 36 7.679108486221184E-5 0.0 0.0 5.818268522297635 0.0 37 7.679108486221184E-5 0.0 0.0 6.0014920507788725 0.0 38 7.679108486221184E-5 0.0 0.0 6.1714691171213785 0.0 39 7.679108486221184E-5 0.0 0.0 6.354539063432892 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATCG 30 2.1665655E-6 45.000004 43 TACGACA 30 2.1665655E-6 45.000004 23 ATTTCGC 60 0.0 45.000004 27 CGTATCA 20 7.034935E-4 45.0 41 CGTTACA 20 7.034935E-4 45.0 34 CCCCCGT 20 7.034935E-4 45.0 41 CTATTCG 45 3.8562575E-10 45.0 26 CGTCGTA 20 7.034935E-4 45.0 22 CGGTCGA 35 1.2127202E-7 45.0 36 CAATACG 45 3.8562575E-10 45.0 1 CCGTTGA 35 1.2127202E-7 45.0 22 AGTCGAC 20 7.034935E-4 45.0 37 GTCGAAC 25 3.8921724E-5 44.999996 29 AACGCAT 25 3.8921724E-5 44.999996 33 ACTCGAT 50 2.1827873E-11 44.999996 31 TTACGTA 25 3.8921724E-5 44.999996 1 CGTATGG 140 0.0 43.392857 2 CGATCAT 105 0.0 42.857147 10 CGTTAGG 420 0.0 40.714287 2 TGACGTT 50 1.0822987E-9 40.499996 28 >>END_MODULE