SRR1545281_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545281_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3377849
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3921	0.11607978923865454	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3538	0.10474121252903845	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCGAA	20	7.0352305E-4	45.000004	16
TACCCGC	20	7.0352305E-4	45.000004	23
TCGCACC	70	0.0	45.000004	38
GACACGT	20	7.0352305E-4	45.000004	15
CGCGAAC	20	7.0352305E-4	45.000004	35
CCCGTTG	20	7.0352305E-4	45.000004	30
TACGAAC	20	7.0352305E-4	45.000004	45
TGGTCGA	70	0.0	45.000004	12
GTACCTA	55	1.8189894E-12	45.0	43
CTATCGT	25	3.892418E-5	45.0	13
CTATACG	50	2.1827873E-11	45.0	1
CGGTTCA	50	2.1827873E-11	45.0	41
CACGCGA	50	2.1827873E-11	45.0	37
TATGATC	55	1.8189894E-12	45.0	35
CGTAAGA	25	3.892418E-5	45.0	43
CCGCGTA	55	1.8189894E-12	45.0	36
CACGTAC	25	3.892418E-5	45.0	30
CAATACG	25	3.892418E-5	45.0	1
AATCGTC	25	3.892418E-5	45.0	23
TACGTCA	45	3.8562575E-10	45.0	15