##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545281_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3377849 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.340452755584987 31.0 31.0 33.0 30.0 34.0 2 31.6582683240133 31.0 31.0 34.0 30.0 34.0 3 31.73734497900883 31.0 31.0 34.0 30.0 34.0 4 30.285251945838905 35.0 33.0 37.0 0.0 37.0 5 32.87983743500671 35.0 33.0 37.0 19.0 37.0 6 34.52031692358066 35.0 33.0 37.0 30.0 37.0 7 35.51624095689298 36.0 35.0 37.0 33.0 37.0 8 35.72180639217443 37.0 35.0 37.0 35.0 37.0 9 37.77876246096258 39.0 37.0 39.0 35.0 39.0 10 37.238089979747464 39.0 37.0 39.0 34.0 39.0 11 36.759636976075605 39.0 35.0 39.0 32.0 39.0 12 35.47167472554279 37.0 35.0 39.0 31.0 39.0 13 34.971511159912716 35.0 34.0 39.0 30.0 39.0 14 35.74914716436407 37.0 34.0 40.0 30.0 41.0 15 36.13608897259765 37.0 35.0 40.0 31.0 41.0 16 36.33926560956396 37.0 35.0 40.0 32.0 41.0 17 36.29578350009133 36.0 35.0 40.0 32.0 41.0 18 36.2905070652951 36.0 35.0 40.0 31.0 41.0 19 36.25443262857517 36.0 35.0 40.0 31.0 41.0 20 36.16391881342239 36.0 35.0 40.0 31.0 41.0 21 35.974061895602794 36.0 34.0 40.0 31.0 41.0 22 35.8395020026058 36.0 34.0 40.0 30.0 41.0 23 35.825779364323274 36.0 34.0 40.0 31.0 41.0 24 35.755466866636134 35.0 34.0 40.0 30.0 41.0 25 35.650357076352435 35.0 34.0 40.0 30.0 41.0 26 35.494567104687036 35.0 34.0 40.0 30.0 41.0 27 35.49283434517055 35.0 34.0 40.0 30.0 41.0 28 35.55372842302897 36.0 34.0 40.0 30.0 41.0 29 35.62678527074478 36.0 34.0 40.0 30.0 41.0 30 35.588620154423715 36.0 34.0 40.0 30.0 41.0 31 35.4408154420165 35.0 34.0 40.0 30.0 41.0 32 35.31700617760001 35.0 34.0 40.0 30.0 41.0 33 35.19021069325479 35.0 34.0 40.0 29.0 41.0 34 35.13362497849963 35.0 34.0 40.0 29.0 41.0 35 35.006425390833044 35.0 34.0 40.0 29.0 41.0 36 34.806279084707455 35.0 33.0 40.0 27.0 41.0 37 34.73928023425559 35.0 33.0 40.0 27.0 41.0 38 34.76533231651267 35.0 33.0 40.0 28.0 41.0 39 34.72319336950823 35.0 34.0 40.0 27.0 41.0 40 34.60572808316772 35.0 33.0 40.0 27.0 41.0 41 34.6187419863943 35.0 34.0 40.0 27.0 41.0 42 34.57658586869928 35.0 33.0 39.0 27.0 41.0 43 34.464485831071784 35.0 33.0 39.0 27.0 41.0 44 34.403042883207625 35.0 33.0 39.0 27.0 41.0 45 34.31511177675497 35.0 33.0 39.0 27.0 41.0 46 34.28205760529852 35.0 33.0 39.0 27.0 41.0 47 34.238170800411744 35.0 33.0 39.0 27.0 41.0 48 34.15581099095904 35.0 33.0 39.0 27.0 41.0 49 34.16040503882797 35.0 33.0 39.0 27.0 41.0 50 33.974677672092504 35.0 33.0 39.0 26.0 40.0 51 33.878114445021076 35.0 33.0 38.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 3.0 12 4.0 13 5.0 14 17.0 15 63.0 16 173.0 17 496.0 18 1191.0 19 2442.0 20 4513.0 21 7468.0 22 11636.0 23 17207.0 24 24334.0 25 34293.0 26 45740.0 27 56260.0 28 68734.0 29 84023.0 30 105922.0 31 134950.0 32 175429.0 33 262621.0 34 404787.0 35 567870.0 36 236063.0 37 288899.0 38 373296.0 39 468997.0 40 411.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.541759267510184 25.54205353762113 30.818221892097604 12.097965302771083 2 27.956607888629716 26.82701328567381 31.469494343885714 13.746884481810762 3 28.473297651848856 26.35330945817886 31.04019747478351 14.133195415188778 4 22.41556682965994 38.84181915769474 26.105252188596946 12.637361824048382 5 23.99527036288478 32.47424618448012 29.38728166948848 14.143201783146612 6 21.737768621391897 41.589307278093244 25.823327212080827 10.84959688843403 7 90.13567509974543 4.158415607091969 4.018652106710513 1.6872571864520882 8 92.1845825553481 2.4197351628210737 3.439022881129381 1.9566594007014524 9 88.89156975341407 4.341253857114395 4.654589355533655 2.11258703393787 10 61.344571648999114 21.59282430919795 8.231096179846997 8.831507861955936 11 54.65143646148777 17.71210021525533 16.2422002878163 11.3942630354406 12 48.22820676708758 20.675139711692264 18.12801578756185 12.968637733658314 13 21.641020661373556 45.801307281645805 19.023230464120804 13.534441592859835 14 14.461244419155502 46.46735244825923 24.345108381102882 14.726294751482378 15 13.75837108171502 22.069755042336116 50.13027521360487 14.041598662343995 16 16.232815617275964 17.091586983313935 47.62684773653292 19.048749662877174 17 16.628155965527174 19.329697686308652 24.89696845536908 39.14517789279509 18 22.87316573357779 24.89383036364266 31.397999140873377 20.835004761906173 19 33.825076254148726 24.505151059150364 21.700022706758055 19.969749979942858 20 35.88410849626493 24.25815955656988 20.52406723924012 19.33366470792507 21 23.834457964225162 30.267871654416762 24.74258026335695 21.15509011800113 22 23.654136108511658 26.074492968750228 22.308782897044836 27.962588025693275 23 21.635425384616067 31.871022061672978 22.599411637405936 23.89414091630502 24 21.10230504679161 23.208882339026996 38.294873453490666 17.393939160690724 25 18.22514860788626 25.476242425283075 34.63446708245395 21.664141884376715 26 16.576051801013012 38.54873323230257 24.743438797885872 20.131776168798545 27 19.321970875548313 35.2152508889533 27.206663175292917 18.256115060205474 28 15.105678199351125 29.39995245494988 39.037446611734275 16.45692273396472 29 16.206141837601386 25.12308868750498 37.366916046276785 21.30385342861685 30 20.12120731270107 31.70819654756622 29.28692194352086 18.88367419621185 31 33.38985845726082 26.86940712861943 20.105368830874323 19.63536558324543 32 35.428374684599575 26.53644375459057 21.719236117422653 16.315945443387196 33 29.62263854897007 27.822114013977533 21.840111858167727 20.71513557888467 34 19.797125330350767 27.400751188108174 26.946260771277814 25.85586271026325 35 21.643181800015334 25.219955066079038 30.173669693346266 22.963193440559362 36 33.151777950997804 24.099034622329178 24.330246852360776 18.41894057431223 37 21.307080334260057 34.04086446729857 26.58283422379153 18.069220974649845 38 21.840733555585228 34.63952947571073 21.251364403796615 22.26837256490743 39 21.605672722492926 34.08239977571525 24.42743888196305 19.884488619828772 40 26.638402131060328 25.539389120117566 22.508288558784006 25.313920190038097 41 17.887211654517415 23.06322751549877 25.630630617295207 33.41893021268861 42 23.268802128218283 25.786587855170556 21.763939122204693 29.180670894406468 43 22.27334614424742 26.92601119825072 24.303010584546556 26.4976320729553 44 20.598611720062088 31.47793166598033 27.20254813048185 20.72090848347573 45 17.4279844954585 38.152711977356 20.63668328572414 23.782620241461355 46 22.041837867826537 34.01054931703578 23.525503952367323 20.42210886277036 47 22.625730161413372 25.66473516134084 26.286669415950804 25.422865261294987 48 24.302507305684774 21.273005394853353 31.47730996856283 22.947177330899045 49 20.42959883641927 23.226467494550526 32.284362030392714 24.05957163863749 50 18.971096694967716 34.62585213252576 24.674637617016035 21.72841355549049 51 18.614864074741057 34.94507895409179 22.17867050895407 24.261386462213082 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 581.0 1 1114.0 2 1647.0 3 4919.0 4 8191.0 5 6160.5 6 4130.0 7 4488.5 8 4847.0 9 5404.5 10 5962.0 11 6229.0 12 6496.0 13 6274.0 14 6052.0 15 6184.0 16 6316.0 17 6233.5 18 6151.0 19 6119.0 20 6087.0 21 6307.0 22 6527.0 23 7738.5 24 8950.0 25 11819.5 26 18749.0 27 22809.0 28 28591.0 29 34373.0 30 36901.0 31 39429.0 32 47839.5 33 56250.0 34 64464.5 35 72679.0 36 76200.0 37 79721.0 38 115460.5 39 151200.0 40 219122.0 41 287044.0 42 335912.0 43 384780.0 44 372399.0 45 360018.0 46 333660.0 47 307302.0 48 288187.5 49 269073.0 50 252348.5 51 235624.0 52 212447.0 53 189270.0 54 173096.5 55 156923.0 56 148577.5 57 140232.0 58 137167.5 59 134103.0 60 121870.0 61 109637.0 62 97347.0 63 85057.0 64 69933.0 65 54809.0 66 47582.0 67 40355.0 68 34118.5 69 27882.0 70 24427.0 71 20972.0 72 17471.5 73 13971.0 74 11473.0 75 6849.0 76 4723.0 77 3389.5 78 2056.0 79 1645.0 80 1234.0 81 803.5 82 373.0 83 231.5 84 90.0 85 107.5 86 125.0 87 87.5 88 50.0 89 50.5 90 51.0 91 41.5 92 32.0 93 16.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3377849.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.967696704913713 #Duplication Level Percentage of deduplicated Percentage of total 1 76.22151403050871 10.64638990367471 2 10.62279182662519 2.9675186878747404 3 3.8365677452475286 1.6076404396041644 4 1.9295549718260325 1.0780575448769738 5 1.0748517913940003 0.750660191246229 6 0.6886394570718952 0.5771224245250008 7 0.45995469387933813 0.44971553634756184 8 0.31437907145247074 0.35129212163364065 9 0.22993375863528034 0.2890480502554587 >10 1.9128162462414322 5.9584073941655005 >50 0.7295342181129513 7.475857804585269 >100 1.9208886296244816 61.82285116826128 >500 0.05232262616621581 4.571740601671575 >1k 0.006250933214547907 1.453698131277897 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3921 0.11607978923865454 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3538 0.10474121252903845 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07780099110410205 0.0 2 0.0 0.0 0.0 0.25936624165260197 0.0 3 0.0 0.0 0.0 0.3698507541337697 0.0 4 0.0 0.0 0.0 0.6285360890910162 0.0 5 0.0 0.0 0.0 1.014847022469033 0.0 6 0.0 0.0 0.0 1.418121413953081 0.0 7 0.0 0.0 0.0 1.6284623735400843 0.0 8 0.0 0.0 0.0 2.1593623634449024 0.0 9 0.0 0.0 0.0 2.298119306102789 0.0 10 0.0 0.0 0.0 2.5350156268086583 0.0 11 0.0 0.0 0.0 2.921800234409531 0.0 12 0.0 0.0 0.0 3.2392211730009244 0.0 13 2.960463892850154E-5 0.0 0.0 3.37010328170383 0.0 14 2.960463892850154E-5 0.0 0.0 3.4164937509047917 0.0 15 2.960463892850154E-5 0.0 0.0 3.490357325031403 0.0 16 2.960463892850154E-5 0.0 0.0 3.658570883423149 0.0 17 2.960463892850154E-5 0.0 0.0 3.8616291018337408 0.0 18 2.960463892850154E-5 0.0 0.0 4.090650588584629 0.0 19 5.920927785700308E-5 0.0 0.0 4.247318337794259 0.0 20 8.881391678550463E-5 0.0 0.0 4.390160720624279 0.0 21 8.881391678550463E-5 0.0 0.0 4.596712286428434 0.0 22 8.881391678550463E-5 0.0 0.0 4.804714479540086 0.0 23 8.881391678550463E-5 0.0 0.0 5.038887173464533 0.0 24 8.881391678550463E-5 0.0 0.0 5.222051074515172 0.0 25 8.881391678550463E-5 0.0 0.0 5.356989018751282 0.0 26 8.881391678550463E-5 0.0 0.0 5.490920405263823 0.0 27 8.881391678550463E-5 0.0 0.0 5.6093981702556865 0.0 28 8.881391678550463E-5 0.0 0.0 5.735513932091103 0.0 29 8.881391678550463E-5 0.0 0.0 5.885550242180749 0.0 30 8.881391678550463E-5 0.0 0.0 6.078246836966366 0.0 31 8.881391678550463E-5 0.0 0.0 6.269729641555913 0.0 32 8.881391678550463E-5 0.0 0.0 6.432199899995529 0.0 33 8.881391678550463E-5 0.0 0.0 6.588956463121946 0.0 34 8.881391678550463E-5 0.0 0.0 6.761225857046896 0.0 35 8.881391678550463E-5 0.0 0.0 6.984267206734226 0.0 36 1.1841855571400616E-4 0.0 0.0 7.168852130453433 0.0 37 1.480231946425077E-4 0.0 0.0 7.3586474706240566 0.0 38 1.480231946425077E-4 0.0 0.0 7.532663538245789 0.0 39 1.480231946425077E-4 0.0 0.0 7.738445383437803 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGAA 20 7.0352305E-4 45.000004 16 TACCCGC 20 7.0352305E-4 45.000004 23 TCGCACC 70 0.0 45.000004 38 GACACGT 20 7.0352305E-4 45.000004 15 CGCGAAC 20 7.0352305E-4 45.000004 35 CCCGTTG 20 7.0352305E-4 45.000004 30 TACGAAC 20 7.0352305E-4 45.000004 45 TGGTCGA 70 0.0 45.000004 12 GTACCTA 55 1.8189894E-12 45.0 43 CTATCGT 25 3.892418E-5 45.0 13 CTATACG 50 2.1827873E-11 45.0 1 CGGTTCA 50 2.1827873E-11 45.0 41 CACGCGA 50 2.1827873E-11 45.0 37 TATGATC 55 1.8189894E-12 45.0 35 CGTAAGA 25 3.892418E-5 45.0 43 CCGCGTA 55 1.8189894E-12 45.0 36 CACGTAC 25 3.892418E-5 45.0 30 CAATACG 25 3.892418E-5 45.0 1 AATCGTC 25 3.892418E-5 45.0 23 TACGTCA 45 3.8562575E-10 45.0 15 >>END_MODULE