##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545278_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2711717 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27320328780621 31.0 31.0 33.0 30.0 34.0 2 31.58897923345246 31.0 31.0 34.0 30.0 34.0 3 31.67844321512901 31.0 31.0 34.0 30.0 34.0 4 30.265370243281286 35.0 33.0 37.0 0.0 37.0 5 32.828901762241415 35.0 33.0 37.0 19.0 37.0 6 34.43388709072517 35.0 33.0 37.0 30.0 37.0 7 35.48308617750303 36.0 35.0 37.0 33.0 37.0 8 35.66808888980672 37.0 35.0 37.0 35.0 37.0 9 37.6948346748573 39.0 37.0 39.0 35.0 39.0 10 37.150038518031195 39.0 37.0 39.0 33.0 39.0 11 36.663301517083084 39.0 35.0 39.0 32.0 39.0 12 35.362927252364464 35.0 35.0 39.0 31.0 39.0 13 34.80661661965463 35.0 34.0 39.0 29.0 39.0 14 35.582256186762855 36.0 34.0 40.0 29.0 41.0 15 35.97053342955773 36.0 34.0 40.0 30.0 41.0 16 36.21972056818613 36.0 35.0 40.0 31.0 41.0 17 36.158539773877585 36.0 35.0 40.0 31.0 41.0 18 36.15531229844412 36.0 35.0 40.0 31.0 41.0 19 36.117451046698456 36.0 35.0 40.0 31.0 41.0 20 35.97527101832529 36.0 34.0 40.0 31.0 41.0 21 35.80558553860893 36.0 34.0 40.0 30.0 41.0 22 35.66037790816667 35.0 34.0 40.0 30.0 41.0 23 35.62922495230882 35.0 34.0 40.0 30.0 41.0 24 35.54538950782843 35.0 34.0 40.0 30.0 41.0 25 35.43423078440708 35.0 34.0 40.0 30.0 41.0 26 35.24440234729509 35.0 34.0 40.0 29.0 41.0 27 35.22929531363339 35.0 34.0 40.0 29.0 41.0 28 35.286033903980396 36.0 34.0 40.0 29.0 41.0 29 35.379003413704304 36.0 34.0 40.0 30.0 41.0 30 35.36033332386823 36.0 34.0 40.0 30.0 41.0 31 35.22888487257335 35.0 34.0 40.0 29.0 41.0 32 35.08828059860229 35.0 34.0 40.0 29.0 41.0 33 34.93158504371953 35.0 34.0 40.0 29.0 41.0 34 34.84636228633003 35.0 34.0 40.0 28.0 41.0 35 34.723785704776716 35.0 34.0 40.0 27.0 41.0 36 34.5192363362401 35.0 33.0 40.0 26.0 41.0 37 34.45206450378118 35.0 33.0 40.0 26.0 41.0 38 34.443004561316684 35.0 33.0 40.0 27.0 41.0 39 34.403823850350165 35.0 33.0 40.0 26.0 41.0 40 34.2516848181429 35.0 33.0 39.0 25.0 41.0 41 34.28535462955758 35.0 33.0 39.0 26.0 41.0 42 34.198552430065526 35.0 33.0 39.0 26.0 41.0 43 34.110792534766716 35.0 33.0 39.0 26.0 41.0 44 34.042648624469294 35.0 33.0 39.0 26.0 41.0 45 33.94707227929758 35.0 33.0 39.0 26.0 41.0 46 33.857190849930134 35.0 33.0 39.0 25.0 41.0 47 33.79923679351496 35.0 33.0 39.0 25.0 41.0 48 33.75353844077387 35.0 33.0 38.0 25.0 41.0 49 33.723374157406546 35.0 33.0 38.0 24.0 40.0 50 33.55989655262699 35.0 33.0 38.0 24.0 40.0 51 33.46535645128161 35.0 32.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 4.0 13 3.0 14 9.0 15 67.0 16 227.0 17 550.0 18 1358.0 19 2770.0 20 4702.0 21 7851.0 22 12328.0 23 18169.0 24 24974.0 25 33048.0 26 42133.0 27 50957.0 28 60124.0 29 73234.0 30 89296.0 31 111870.0 32 142783.0 33 211405.0 34 322411.0 35 448135.0 36 183472.0 37 222492.0 38 288595.0 39 358495.0 40 255.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.73391618668172 24.636199131399035 30.543969005615264 13.08591567630398 2 27.53432603770969 28.41284691581017 29.873102539829933 14.179724506650215 3 28.50278992977512 26.34710775497591 31.007107305076453 14.142995010172521 4 21.717421102570807 39.061893258035404 26.531455900449792 12.689229738943997 5 24.326727309671327 32.26435501934752 29.22030580624748 14.188611864733671 6 22.636469808612034 40.32327119680999 25.99371542089385 11.046543573684128 7 88.94858866172244 4.173776245825063 5.047945637395053 1.8296894550574414 8 90.92810938604582 3.1309683126963472 3.805669986949228 2.1352523143086097 9 87.66530578227743 4.421405331013524 4.933036891386528 2.980251995322521 10 61.85973683832052 20.293489327979284 8.751134428850799 9.0956394048494 11 55.38778567232495 17.81989049742285 15.796338629731643 10.995985200520556 12 50.1334394407676 20.303556750206603 16.91765770543165 12.645346103594143 13 21.313544149334167 45.42218085441807 18.16712437175413 15.097150624493633 14 13.680741758819229 47.192719594264446 23.100861926226077 16.02567672069025 15 12.946446845301335 23.350666754679782 50.27095379053198 13.431932609486905 16 13.833043787386368 16.67095054535558 49.415517917245786 20.08048775001226 17 14.92976590108776 19.313962334565147 25.51811269391312 40.23815907043397 18 22.029289929590735 24.401181981748095 31.531682694027435 22.03784539463373 19 32.68980502021413 25.44085536949468 20.11400894709883 21.75533066319236 20 36.53640848215356 22.94454030416891 21.18414274055884 19.33490847311869 21 22.894940733122223 30.315294700737578 24.129250950596983 22.660513615543216 22 24.03119499564298 25.526926297987586 22.26637219149343 28.175506514875998 23 21.800246854668092 32.1758502085579 20.894178854209343 25.129724082564664 24 22.10739542511258 22.31032958085228 37.979110652033384 17.603164342001765 25 17.820517406499278 25.501296779863093 34.29896998838743 22.379215825250203 26 16.491248902448152 38.97453163438515 23.705091644887723 20.829127818278973 27 19.2444491810908 36.17328061888464 26.452907880874 18.12936231915056 28 15.94687056208299 29.180036117338204 39.24484007733845 15.628253243240353 29 15.82952793377775 24.629893163630275 37.91125696376134 21.629321938830635 30 19.370273520430047 32.30340776710844 28.506809523265147 19.819509189196367 31 31.403424472391478 28.281085378747118 19.949389999030135 20.366100149831272 32 34.07903553357522 27.349535368181854 22.063917436812176 16.507511661430748 33 29.228492501245523 28.91879941749084 21.75311804292262 20.099590038341024 34 19.10789363344331 27.77233022472478 27.107032186618298 26.01274395521361 35 21.54225533121635 24.879661115079486 29.42512068921646 24.152962864487705 36 31.76334403626927 25.38815813007036 23.39727928836232 19.45121854529805 37 21.738772888173802 32.918848095136774 26.851880192512713 18.49049882417671 38 20.506749044977777 33.59384478542562 22.1046296497754 23.794776519821205 39 21.419565537259235 31.998471816933698 25.615578616795187 20.966384029011877 40 25.544110982082568 25.130314114636594 23.592727412189397 25.732847491091437 41 16.836565172545658 22.932223384667353 26.8827093682711 33.34850207451589 42 23.594460631400697 24.74435938558485 21.838267046303137 29.822912936711315 43 22.905635064425972 27.50799585649977 23.325922284663186 26.26044679441107 44 20.65433081696947 31.199900284579847 26.11902348217015 22.026745416280534 45 18.006451263166472 38.328299007602936 19.98099359188293 23.684256137347663 46 22.09832368200664 34.08279698803378 22.64469338061457 21.17418594934501 47 21.998386999823357 26.601005930928633 26.192777491161507 25.207829578086503 48 24.459447648851263 20.95321893840692 31.38328962793684 23.204043784804977 49 19.966095282066675 23.053769991485098 32.016725934159055 24.963408792289165 50 18.344355255360348 33.595061726573974 25.508340287721765 22.55224273034391 51 17.643065260866088 35.11332487866544 21.962653182467047 25.280956678001427 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 657.0 1 1115.0 2 1573.0 3 4274.0 4 6975.0 5 5299.0 6 3623.0 7 4028.0 8 4433.0 9 5045.5 10 5658.0 11 5867.0 12 6076.0 13 5901.0 14 5726.0 15 5521.0 16 5316.0 17 5316.5 18 5317.0 19 5127.0 20 4937.0 21 4777.0 22 4617.0 23 5386.5 24 6156.0 25 8581.0 26 13152.5 27 15299.0 28 19063.5 29 22828.0 30 28085.5 31 33343.0 32 39000.0 33 44657.0 34 53509.5 35 62362.0 36 62928.0 37 63494.0 38 83398.5 39 103303.0 40 156705.5 41 210108.0 42 258363.0 43 306618.0 44 298396.0 45 290174.0 46 277469.5 47 264765.0 48 245071.5 49 225378.0 50 209500.5 51 193623.0 52 171066.0 53 148509.0 54 134773.0 55 121037.0 56 114874.5 57 108712.0 58 109848.0 59 110984.0 60 103539.5 61 96095.0 62 83350.5 63 70606.0 64 61891.5 65 53177.0 66 43310.5 67 33444.0 68 28492.5 69 23541.0 70 19540.0 71 15539.0 72 12635.0 73 9731.0 74 8070.5 75 4553.0 76 2696.0 77 2352.5 78 2009.0 79 1365.5 80 722.0 81 469.0 82 216.0 83 161.5 84 107.0 85 113.5 86 120.0 87 71.5 88 23.0 89 16.5 90 10.0 91 6.5 92 3.0 93 3.0 94 3.0 95 1.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2711717.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.584199343979341 #Duplication Level Percentage of deduplicated Percentage of total 1 78.21661045085244 12.189432492764622 2 9.772162956511897 3.0458267107226384 3 3.4596314868849216 1.6174676024496681 4 1.6799418879343366 1.047221970714788 5 0.9551572740059759 0.7442680681480512 6 0.5830308759664289 0.5451641636853433 7 0.4159913399357303 0.4538024376849247 8 0.2744558067939926 0.3421739203352208 9 0.1997047404037622 0.28010146359508875 >10 1.7590248163182924 6.350353385440911 >50 0.770212335235196 8.851653753668616 >100 1.8806446327082555 60.420709670883674 >500 0.02931676303978947 2.923620217306156 >1k 0.004114633409093259 1.188204142600314 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3640 0.13423229636425926 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3517 0.12969642481129115 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2850 0.1050994628126755 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08478023333555824 0.0 2 0.0 0.0 0.0 0.303534624003906 0.0 3 0.0 0.0 0.0 0.4331204178017101 0.0 4 0.0 0.0 0.0 0.6814870430800855 0.0 5 0.0 0.0 0.0 1.1279938135137257 0.0 6 0.0 0.0 0.0 1.5323132908043133 0.0 7 0.0 0.0 0.0 1.7498507403243038 0.0 8 0.0 0.0 0.0 2.2182624514283753 0.0 9 0.0 0.0 0.0 2.3536379349320007 0.0 10 3.687700449567562E-5 0.0 0.0 2.6626672326057625 0.0 11 3.687700449567562E-5 0.0 0.0 3.029224657292778 0.0 12 3.687700449567562E-5 0.0 0.0 3.3889598361480937 0.0 13 3.687700449567562E-5 0.0 0.0 3.518766891972872 0.0 14 3.687700449567562E-5 0.0 0.0 3.578544516260362 0.0 15 3.687700449567562E-5 0.0 0.0 3.6770429952683115 0.0 16 3.687700449567562E-5 0.0 0.0 3.874593108351646 0.0 17 3.687700449567562E-5 0.0 0.0 4.080403670442012 0.0 18 3.687700449567562E-5 0.0 0.0 4.320436092704364 0.0 19 7.375400899135124E-5 0.0 0.0 4.476536452734559 0.0 20 7.375400899135124E-5 0.0 0.0 4.6132026313955325 0.0 21 7.375400899135124E-5 0.0 0.0 4.813002241753103 0.0 22 7.375400899135124E-5 0.0 0.0 5.010773616863411 0.0 23 7.375400899135124E-5 0.0 0.0 5.22849545140588 0.0 24 7.375400899135124E-5 0.0 0.0 5.39060676316887 0.0 25 7.375400899135124E-5 0.0 0.0 5.525576599623043 0.0 26 7.375400899135124E-5 0.0 0.0 5.658444446820963 0.0 27 7.375400899135124E-5 0.0 0.0 5.778552850463378 0.0 28 1.1063101348702685E-4 0.0 0.0 5.902459585568848 0.0 29 1.1063101348702685E-4 0.0 0.0 6.035548694793741 0.0 30 1.1063101348702685E-4 0.0 0.0 6.211120113197653 0.0 31 1.1063101348702685E-4 0.0 0.0 6.381454996963178 0.0 32 1.1063101348702685E-4 0.0 0.0 6.5357852607775815 0.0 33 1.1063101348702685E-4 0.0 0.0 6.680195610382647 0.0 34 1.1063101348702685E-4 0.0 0.0 6.848059734846962 0.0 35 1.1063101348702685E-4 0.0 0.0 7.067514788600728 0.0 36 1.1063101348702685E-4 0.0 0.0 7.245704474323833 0.0 37 1.1063101348702685E-4 0.0 0.0 7.415412449012932 0.0 38 1.1063101348702685E-4 0.0 0.0 7.581949001315403 0.0 39 1.4750801798270248E-4 0.0 0.0 7.745756655285194 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAACA 35 1.2127384E-7 45.000004 11 ACGTTCA 35 1.2127384E-7 45.000004 19 GCAACCG 35 1.2127384E-7 45.000004 1 GACGTAT 35 1.2127384E-7 45.000004 17 TCCACGT 35 1.2127384E-7 45.000004 16 ATCTACG 20 7.034985E-4 45.0 23 ACGTTCC 20 7.034985E-4 45.0 15 CGCATTA 40 6.8212103E-9 45.0 36 ATTACCG 40 6.8212103E-9 45.0 1 CCAATCG 25 3.892213E-5 45.0 29 TCGTAGT 20 7.034985E-4 45.0 34 TATAGCG 165 0.0 45.0 1 CGGTCGA 20 7.034985E-4 45.0 35 CGCCGTG 25 3.892213E-5 45.0 24 ACCTTCG 20 7.034985E-4 45.0 1 TCGCGAC 25 3.892213E-5 45.0 22 ATCGATA 25 3.892213E-5 45.0 36 GATAGTC 20 7.034985E-4 45.0 9 CGGACTA 20 7.034985E-4 45.0 36 CGTGAAC 30 2.1665983E-6 44.999996 44 >>END_MODULE