SRR1545276_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545276_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1978146
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3160	0.15974553951022827	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2048	0.10353128636612262	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATTTCG	20	7.034523E-4	45.0	40
GTCATCG	20	7.034523E-4	45.0	1
CTTCGAA	45	3.8562575E-10	45.0	31
CTAGAAC	20	7.034523E-4	45.0	11
AGCGTCG	25	3.89183E-5	45.0	24
GTCGCGA	20	7.034523E-4	45.0	27
CGAACCG	20	7.034523E-4	45.0	36
TCCGCGA	25	3.89183E-5	45.0	23
GTCGATC	20	7.034523E-4	45.0	33
GTCGACG	40	6.8193913E-9	45.0	1
CTCCGAT	20	7.034523E-4	45.0	38
CGACGTC	40	6.8193913E-9	45.0	18
CATGCGT	20	7.034523E-4	45.0	34
CTATCGG	35	1.2125201E-7	45.0	2
TAGACCG	50	2.1827873E-11	45.0	1
ACGCACC	40	6.8193913E-9	45.0	40
TAGGTCG	45	3.8562575E-10	45.0	2
CGTGAAC	45	3.8562575E-10	45.0	36
ATTACGA	20	7.034523E-4	45.0	41
TAGCGCG	45	3.8562575E-10	45.0	1