##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545276_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1978146 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.297676207923985 31.0 31.0 33.0 30.0 34.0 2 31.596322010609935 31.0 31.0 34.0 30.0 34.0 3 31.686583295671806 31.0 31.0 34.0 30.0 34.0 4 30.252381270138805 35.0 33.0 37.0 0.0 37.0 5 32.81788351314817 35.0 33.0 37.0 19.0 37.0 6 34.435567951000586 35.0 33.0 37.0 30.0 37.0 7 35.49421529047906 36.0 35.0 37.0 33.0 37.0 8 35.69613618003929 37.0 35.0 37.0 35.0 37.0 9 37.74880418331104 39.0 37.0 39.0 35.0 39.0 10 37.20954317830939 39.0 37.0 39.0 34.0 39.0 11 36.706891705667836 39.0 35.0 39.0 32.0 39.0 12 35.074493490369264 35.0 35.0 39.0 31.0 39.0 13 34.42113372824857 35.0 33.0 39.0 27.0 39.0 14 35.074978793274106 35.0 33.0 40.0 27.0 41.0 15 35.600037105451264 35.0 34.0 40.0 30.0 41.0 16 35.90226606125129 35.0 34.0 40.0 31.0 41.0 17 35.874561331671174 35.0 34.0 40.0 31.0 41.0 18 35.876984813052225 36.0 35.0 40.0 31.0 41.0 19 35.831460367434964 36.0 35.0 40.0 31.0 41.0 20 35.686794099121094 35.0 34.0 40.0 31.0 41.0 21 35.4634066444034 35.0 34.0 40.0 30.0 41.0 22 35.31737596719352 35.0 34.0 40.0 30.0 41.0 23 35.34930990937979 35.0 34.0 40.0 30.0 41.0 24 35.262043347659876 35.0 34.0 40.0 30.0 41.0 25 35.13439250692315 35.0 34.0 39.0 30.0 41.0 26 34.94630932196107 35.0 34.0 39.0 29.0 41.0 27 34.90869834683588 35.0 34.0 39.0 29.0 41.0 28 34.99356013155753 35.0 34.0 39.0 29.0 41.0 29 35.108590063625236 35.0 34.0 39.0 30.0 41.0 30 35.09624466545947 36.0 34.0 39.0 30.0 41.0 31 34.88492558183268 35.0 34.0 39.0 29.0 41.0 32 34.759628965708295 35.0 34.0 39.0 29.0 41.0 33 34.63875719992357 35.0 34.0 39.0 29.0 41.0 34 34.60173718218979 35.0 34.0 39.0 29.0 41.0 35 34.46186125796579 35.0 33.0 39.0 27.0 41.0 36 34.220795128367676 35.0 33.0 39.0 26.0 41.0 37 34.111135881780214 35.0 33.0 39.0 26.0 41.0 38 34.15084933063586 35.0 33.0 39.0 27.0 41.0 39 34.12697748295626 35.0 33.0 39.0 26.0 41.0 40 34.00166519559224 35.0 33.0 39.0 25.0 41.0 41 34.065090241064105 35.0 33.0 39.0 26.0 41.0 42 34.019460646484134 35.0 33.0 38.0 26.0 41.0 43 33.90224280715377 35.0 33.0 38.0 26.0 41.0 44 33.84011695800007 35.0 33.0 38.0 26.0 41.0 45 33.7546616882677 35.0 33.0 38.0 26.0 41.0 46 33.71743844994252 35.0 33.0 38.0 26.0 40.0 47 33.659457390910475 35.0 33.0 38.0 26.0 40.0 48 33.627525976343506 35.0 33.0 38.0 26.0 40.0 49 33.6407545246913 35.0 33.0 38.0 25.0 40.0 50 33.411126883455516 35.0 33.0 38.0 24.0 40.0 51 33.32015280975216 35.0 32.0 37.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 1.0 13 1.0 14 13.0 15 39.0 16 166.0 17 417.0 18 1021.0 19 1960.0 20 3558.0 21 5783.0 22 8974.0 23 12733.0 24 17920.0 25 24043.0 26 30938.0 27 37623.0 28 45245.0 29 55090.0 30 67412.0 31 84255.0 32 109734.0 33 166097.0 34 262403.0 35 377331.0 36 119062.0 37 138949.0 38 180890.0 39 226330.0 40 156.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.590489276322376 24.525894448640294 31.302138467029227 12.581477808008104 2 26.54809099025047 27.308550531659442 32.217136652198576 13.926221825891517 3 29.3097172807265 26.16419617156671 30.774573767558106 13.751512780148683 4 21.733785069453923 39.50871169266576 25.84607000696612 12.911433230914199 5 23.430272588575363 32.231291320256446 30.523631723846474 13.814804367321726 6 21.125589314438873 40.83566127070499 26.533279141175626 11.505470273680507 7 89.18805790876912 4.816884092478513 4.332541682969811 1.662516315782556 8 92.0870350317924 2.3328409530944634 3.514401869225022 2.0657221458881194 9 89.5826192808822 3.241520090023689 4.880832860668525 2.2950277684255864 10 67.54511547681516 16.669244838348636 7.236574044585183 8.549065640251023 11 62.52571852633729 14.495947215220717 13.457196789316866 9.521137469125131 12 53.35121876747216 20.988086824733866 15.414635724562292 10.246058683231672 13 18.421339981983127 54.20712121349991 16.340907091792012 11.030631712724945 14 10.835752264999652 53.33822680429048 24.3575550035235 11.468465927186365 15 9.86079895012805 21.3200643430768 58.482993671852334 10.33614303494282 16 10.975074640597812 13.837199074284708 55.05822118286516 20.12950510225231 17 13.005915640200472 16.256181292988487 25.058514386703507 45.679388680107536 18 21.73322899320879 22.41518067928252 34.44366593770126 21.407924389807427 19 33.89699243635202 23.0852020022789 21.276842053114382 21.740963508254698 20 36.99302275969519 22.452437787706266 20.740329581335253 19.814209871263294 21 21.531727182927852 30.477072976413268 25.33018290864274 22.66101693201614 22 22.54171330124268 26.11794073844903 20.956946555006557 30.38339940530173 23 18.96265493042475 34.512265525396 20.495605481091893 26.029474063087356 24 19.49977403083493 22.460323959909935 42.82600980918496 15.213892200070166 25 14.564546802915457 24.65859446168281 38.82413128252414 21.952727452877593 26 14.064634258543101 42.24698278084631 23.454133314730054 20.234249645880535 27 16.032941956761533 40.290099921846014 26.820214483662987 16.856743637729473 28 12.351919423541032 29.689416251378812 43.5861154838925 14.372548841187657 29 11.457243297511912 24.28991591116126 42.12257335909483 22.130267432232 30 17.948725726008092 33.53422851498322 29.373918810846117 19.14312694816257 31 34.00264692292682 27.62748553443477 20.127584111587314 18.242283431051096 32 36.331190923218 26.29932269913343 21.536276897660738 15.833209479987827 33 31.23940295610132 27.98135223588148 20.85275808762346 19.926486720393743 34 17.819614932365962 27.690979331151492 26.68286365111574 27.806542085366804 35 20.077941668612933 23.415915710973813 32.02898067180077 24.477161948612487 36 35.59221614582543 21.99428151410462 24.47877962496196 17.934722715107984 37 19.412975584208645 34.80127351570612 28.41342347834791 17.372327421737324 38 19.988059526445472 36.587693729380945 20.50940628244831 22.914840461725273 39 19.737774663750805 34.69521461004395 25.2278143271528 20.339196399052444 40 25.473701132272343 25.04264093752433 21.786612312741322 27.697045617462006 41 15.77856235080727 21.240697097180895 26.40907192896783 36.571668623044005 42 22.379490694822323 24.555113727702608 20.993900349114778 32.07149522836029 43 21.8232122401481 27.374116976198927 23.722920350671792 27.079750432981186 44 18.978578931989855 33.3368720003478 26.664513135026436 21.020035932635913 45 15.687011979904417 42.33625829438272 18.677387816672784 23.29934190904008 46 22.2115556687929 34.874675580063354 23.137675378864856 19.77609337227889 47 21.040661306091664 26.600210500134974 26.26059957151798 26.098528622255383 48 24.09958617816885 19.69379408799957 32.91496178745148 23.291657946380095 49 20.615111321409035 21.168963261559057 33.930609772989456 24.285315644042452 50 18.398237541617252 35.94689168544688 24.33273378203631 21.32213699089956 51 16.14157903410567 38.40252438394335 20.749580667958785 24.706315913992192 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 380.0 1 566.5 2 753.0 3 2262.0 4 3771.0 5 2901.0 6 2031.0 7 2451.5 8 2872.0 9 3330.0 10 3788.0 11 4066.5 12 4345.0 13 4288.5 14 4232.0 15 4085.0 16 3938.0 17 3722.0 18 3506.0 19 3502.0 20 3498.0 21 4182.5 22 4867.0 23 4987.5 24 5108.0 25 5953.5 26 8994.5 27 11190.0 28 13325.0 29 15460.0 30 17948.0 31 20436.0 32 25024.5 33 29613.0 34 32897.5 35 36182.0 36 39396.0 37 42610.0 38 64469.0 39 86328.0 40 132980.5 41 179633.0 42 225151.5 43 270670.0 44 263837.0 45 257004.0 46 226128.5 47 195253.0 48 180811.5 49 166370.0 50 151205.0 51 136040.0 52 121898.0 53 107756.0 54 97194.5 55 86633.0 56 75734.5 57 64836.0 58 61124.5 59 57413.0 60 55027.5 61 52642.0 62 45998.5 63 39355.0 64 32773.0 65 26191.0 66 21698.5 67 17206.0 68 13636.5 69 10067.0 70 8701.5 71 7336.0 72 6576.5 73 5817.0 74 4856.5 75 2692.0 76 1488.0 77 899.5 78 311.0 79 314.5 80 318.0 81 203.0 82 88.0 83 97.0 84 106.0 85 56.5 86 7.0 87 4.5 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1978146.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.28018184475322 #Duplication Level Percentage of deduplicated Percentage of total 1 78.1868421329247 11.94709165658102 2 9.795785159363719 2.99362757094425 3 3.455906362755079 1.584206329840119 4 1.6596404521297952 1.0143843162180688 5 0.8840077693129463 0.6753899733638237 6 0.5219106660580806 0.47849339304502453 7 0.3332124170952842 0.35640824283019895 8 0.2572701595857532 0.31449078573591915 9 0.1868051257448623 0.2568974661822138 >10 1.8099481321490793 6.580400187512307 >50 0.8497686702686749 9.583110196738797 >100 2.0273103702529527 60.60964849511466 >500 0.028361522799713688 2.8216725146992205 >1k 0.003231059559461053 0.7841788711943807 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3160 0.15974553951022827 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2048 0.10353128636612262 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07921558873814168 0.0 2 0.0 0.0 0.0 0.3112510401153403 0.0 3 0.0 0.0 0.0 0.4536571112546799 0.0 4 0.0 0.0 0.0 0.761622246285158 0.0 5 0.0 0.0 0.0 1.2173014529766761 0.0 6 0.0 0.0 0.0 1.7480004003748966 0.0 7 0.0 0.0 0.0 1.980238061295779 0.0 8 0.0 0.0 0.0 2.5531482509379995 0.0 9 0.0 0.0 0.0 2.7169379813219043 0.0 10 0.0 0.0 0.0 2.975614540079448 0.0 11 0.0 0.0 0.0 3.377303798607383 0.0 12 0.0 0.0 0.0 3.688352629179039 0.0 13 0.0 0.0 0.0 3.820041594503136 0.0 14 0.0 0.0 0.0 3.8789351241010523 0.0 15 0.0 0.0 0.0 3.9620937989410288 0.0 16 0.0 0.0 0.0 4.153384027265935 0.0 17 0.0 0.0 0.0 4.376673915878808 0.0 18 0.0 0.0 0.0 4.651223923815532 0.0 19 0.0 0.0 0.0 4.794539937901449 0.0 20 0.0 0.0 0.0 4.927442160487648 0.0 21 0.0 0.0 0.0 5.132937609256344 0.0 22 0.0 0.0 0.0 5.3182121036566565 0.0 23 0.0 0.0 0.0 5.539682106376374 0.0 24 0.0 0.0 0.0 5.684666349197683 0.0 25 0.0 0.0 0.0 5.804930475303643 0.0 26 0.0 0.0 0.0 5.924436315620788 0.0 27 0.0 0.0 0.0 6.032011792860588 0.0 28 0.0 0.0 0.0 6.150051613986025 0.0 29 0.0 0.0 0.0 6.28113395067907 0.0 30 0.0 0.0 0.0 6.454427529616115 0.0 31 0.0 0.0 0.0 6.628883813429343 0.0 32 0.0 0.0 0.0 6.759460626263178 0.0 33 0.0 0.0 0.0 6.891301248745037 0.0 34 0.0 0.0 0.0 7.048165302257771 0.0 35 0.0 0.0 0.0 7.2613447136864515 0.0 36 0.0 0.0 0.0 7.425437758385883 0.0 37 5.055238592095831E-5 0.0 0.0 7.592159527153203 0.0 38 1.0110477184191662E-4 0.0 0.0 7.737345979518195 0.0 39 1.0110477184191662E-4 0.0 0.0 7.890418604086857 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTTCG 20 7.034523E-4 45.0 40 GTCATCG 20 7.034523E-4 45.0 1 CTTCGAA 45 3.8562575E-10 45.0 31 CTAGAAC 20 7.034523E-4 45.0 11 AGCGTCG 25 3.89183E-5 45.0 24 GTCGCGA 20 7.034523E-4 45.0 27 CGAACCG 20 7.034523E-4 45.0 36 TCCGCGA 25 3.89183E-5 45.0 23 GTCGATC 20 7.034523E-4 45.0 33 GTCGACG 40 6.8193913E-9 45.0 1 CTCCGAT 20 7.034523E-4 45.0 38 CGACGTC 40 6.8193913E-9 45.0 18 CATGCGT 20 7.034523E-4 45.0 34 CTATCGG 35 1.2125201E-7 45.0 2 TAGACCG 50 2.1827873E-11 45.0 1 ACGCACC 40 6.8193913E-9 45.0 40 TAGGTCG 45 3.8562575E-10 45.0 2 CGTGAAC 45 3.8562575E-10 45.0 36 ATTACGA 20 7.034523E-4 45.0 41 TAGCGCG 45 3.8562575E-10 45.0 1 >>END_MODULE