##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545275_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2786715 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.333733087165353 31.0 31.0 33.0 30.0 34.0 2 31.660777295130647 31.0 31.0 34.0 30.0 34.0 3 31.751013289841264 31.0 31.0 34.0 30.0 34.0 4 30.313541571348345 35.0 33.0 37.0 0.0 37.0 5 32.905702233633505 35.0 33.0 37.0 19.0 37.0 6 34.54430395645051 35.0 33.0 37.0 30.0 37.0 7 35.55632312597449 37.0 35.0 37.0 33.0 37.0 8 35.750879799333624 37.0 35.0 37.0 35.0 37.0 9 37.791600145691255 39.0 37.0 39.0 35.0 39.0 10 37.20508555772657 39.0 37.0 39.0 33.0 39.0 11 36.75487374919933 39.0 35.0 39.0 32.0 39.0 12 35.78851156289753 37.0 35.0 39.0 32.0 39.0 13 35.41016214431688 37.0 35.0 39.0 30.0 39.0 14 36.21383313327699 38.0 35.0 40.0 31.0 41.0 15 36.54052818461881 38.0 35.0 40.0 31.0 41.0 16 36.73167367312409 38.0 35.0 40.0 32.0 41.0 17 36.67293282592587 38.0 35.0 40.0 32.0 41.0 18 36.645112973519 38.0 35.0 40.0 31.0 41.0 19 36.63735437603056 38.0 35.0 40.0 31.0 41.0 20 36.54643693380916 38.0 35.0 40.0 31.0 41.0 21 36.37508213075252 38.0 35.0 40.0 31.0 41.0 22 36.28051881875255 38.0 35.0 40.0 31.0 41.0 23 36.23701311400699 37.0 35.0 40.0 31.0 41.0 24 36.18022438606029 37.0 35.0 40.0 31.0 41.0 25 36.069996752448674 37.0 34.0 40.0 31.0 41.0 26 35.96652007830008 37.0 34.0 40.0 30.0 41.0 27 35.9846385439487 37.0 34.0 40.0 30.0 41.0 28 36.023189310711714 37.0 35.0 40.0 30.0 41.0 29 36.07776396222793 37.0 35.0 40.0 30.0 41.0 30 36.01991484597456 37.0 35.0 40.0 30.0 41.0 31 35.882480267985784 37.0 34.0 40.0 30.0 41.0 32 35.78450648882286 37.0 34.0 40.0 30.0 41.0 33 35.676520921586885 37.0 34.0 40.0 30.0 41.0 34 35.60007356331738 37.0 34.0 40.0 30.0 41.0 35 35.47788094584484 37.0 34.0 40.0 29.0 41.0 36 35.32245134504246 36.0 34.0 40.0 29.0 41.0 37 35.25183450765507 36.0 34.0 40.0 29.0 41.0 38 35.21432331616258 36.0 34.0 40.0 29.0 41.0 39 35.17275035301421 36.0 34.0 40.0 28.0 41.0 40 35.075483499389065 36.0 34.0 40.0 28.0 41.0 41 35.052021107289406 36.0 34.0 40.0 28.0 41.0 42 35.0071277471862 36.0 34.0 40.0 28.0 41.0 43 34.952632759360036 36.0 33.0 40.0 28.0 41.0 44 34.891936563301236 35.0 34.0 40.0 27.0 41.0 45 34.793383248735516 35.0 34.0 40.0 27.0 41.0 46 34.7584367256788 35.0 34.0 40.0 27.0 41.0 47 34.69860462946516 35.0 33.0 40.0 27.0 41.0 48 34.59041487916777 35.0 33.0 40.0 27.0 41.0 49 34.5741311903083 35.0 33.0 39.0 27.0 41.0 50 34.41159501420131 35.0 33.0 39.0 27.0 41.0 51 34.32034205148356 35.0 33.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 0.0 13 0.0 14 10.0 15 48.0 16 121.0 17 386.0 18 907.0 19 1767.0 20 3239.0 21 5311.0 22 8369.0 23 12523.0 24 18422.0 25 25402.0 26 33767.0 27 42644.0 28 52470.0 29 64669.0 30 81425.0 31 103651.0 32 134809.0 33 196432.0 34 294262.0 35 397432.0 36 211046.0 37 270080.0 38 362096.0 39 465197.0 40 229.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.064102357076344 25.84053267018694 30.841044024954112 12.254320947782604 2 27.372300360819104 26.283850339916352 32.509962446823586 13.833886852440958 3 28.728664395174963 25.85258987732868 31.569679712493027 13.849066015003327 4 22.049725214096167 39.21028881676095 26.280620730860527 12.45936523828235 5 23.14589041218783 32.78318737294628 29.70956843451878 14.36135378034711 6 22.302962448617816 40.40664366467328 26.447627403591685 10.842766483117218 7 91.00876838858656 3.4756334967874363 3.962084389684629 1.5535137249413735 8 92.96411724916254 2.0173573544477996 3.252467511030012 1.766057885359644 9 89.03827624999327 4.031700407110163 4.62799389245043 2.3020294504461343 10 55.35808290406447 27.293928514397773 8.928505426640328 8.419483154897433 11 45.791370843448284 20.15372939105721 21.072840243799597 12.9820595216949 12 41.990695137464726 22.154328662959795 21.46595543498348 14.389020764592 13 22.12892240505398 40.272112505225685 22.412230888339852 15.186734201380478 14 15.27881394401652 41.450130350609946 26.970178148823976 16.300877556549555 15 14.096489953224495 24.464288597865227 46.63142804341312 14.807793405497153 16 18.05466292749707 20.32181260014031 43.21159501420131 18.41192945816131 17 18.418065715367376 21.102409108932918 26.13467828608236 34.34484688961735 18 23.386855132297345 24.927773381921007 32.06348693712848 19.621884548653163 19 30.973206804427434 25.776622295426694 23.276115426227655 19.974055473918213 20 33.39846378262578 24.985726922200513 23.429844817284867 18.18596447788884 21 23.843378314610572 28.39709119877705 27.44162930188412 20.317901184728253 22 24.23096728585449 25.202577228026545 24.973920906874223 25.592534579244735 23 21.053390820374528 30.811475159820795 25.100808658223034 23.034325361581647 24 20.866037610591682 24.959315897032887 35.98749782449946 18.187148667875977 25 19.094848235287785 27.707749088084 32.92112756417502 20.27627511245319 26 17.965705140281656 36.70131319492664 24.970655413273334 20.362326251518365 27 18.44483558598565 33.78052653392973 29.06820396057724 18.706433919507376 28 15.833337818901466 29.64160310616622 36.9110224762848 17.614036598647512 29 16.595453786985754 25.891704031449216 36.01326292785592 21.49957925370912 30 20.462408247703838 30.06317474158642 30.033713530088296 19.440703480621448 31 29.204744654548453 27.382563340707605 23.67945771275498 19.733234291988953 32 30.996208797813914 26.676714339284786 24.554107614162195 17.772969248739106 33 27.849851886540243 27.43427297014585 24.350857550915684 20.365017592398218 34 20.196037269688503 28.265394918389575 27.158428472233435 24.380139339688487 35 20.06258264659285 26.145407765056706 30.488693676963734 23.303315911386704 36 30.614899621956315 24.50523286378406 26.25227194025941 18.62759557400021 37 21.646921195744813 31.230929607082174 27.744889592225974 19.377259604947046 38 21.082852031872655 32.73459969892867 23.5337305752472 22.648817693951482 39 21.674839371805156 30.540833920942763 26.39975742047536 21.384569286776724 40 25.024195154509883 24.895549060452897 25.696671529022524 24.383584256014696 41 18.90125111466368 23.729660191300507 27.340542538436836 30.028546155598978 42 22.381154872313818 25.635631917867453 24.774259298134183 27.208953911684546 43 22.033218323366402 26.4601152252742 26.499085841214477 25.00758061014492 44 20.70771499776619 30.02653662107535 27.64627886238815 21.61946951877031 45 18.653217139176416 34.57770170254224 23.036514318830594 23.73256683945075 46 21.96948737133148 32.36412765568061 25.475694500514045 20.190690472473865 47 21.36153140884518 27.34829360017081 27.83402680216671 23.4561481888173 48 22.595457375440258 23.374152003344438 31.14502200619726 22.885368615018038 49 20.97699262393176 23.65039123125257 31.713074354571603 23.659541790244067 50 19.58381104633951 32.17218122412949 26.021247239132816 22.222760490398194 51 18.494033297269365 33.81964068805027 24.00180858107126 23.684517433609106 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 459.0 1 880.0 2 1301.0 3 4118.0 4 6935.0 5 5056.5 6 3178.0 7 3598.0 8 4018.0 9 4318.5 10 4619.0 11 4751.0 12 4883.0 13 5054.5 14 5226.0 15 5021.5 16 4817.0 17 5069.0 18 5321.0 19 5744.0 20 6167.0 21 8160.0 22 10153.0 23 10473.0 24 10793.0 25 13254.5 26 20401.0 27 25086.0 28 29885.5 29 34685.0 30 40929.5 31 47174.0 32 56203.0 33 65232.0 34 73517.0 35 81802.0 36 87468.0 37 93134.0 38 115780.0 39 138426.0 40 184608.0 41 230790.0 42 259112.0 43 287434.0 44 283472.5 45 279511.0 46 263121.5 47 246732.0 48 233957.5 49 221183.0 50 204167.5 51 187152.0 52 171671.5 53 156191.0 54 143002.5 55 129814.0 56 119564.0 57 109314.0 58 104969.0 59 100624.0 60 93633.5 61 86643.0 62 73350.0 63 60057.0 64 52657.0 65 45257.0 66 37522.5 67 29788.0 68 23270.5 69 16753.0 70 15169.5 71 13586.0 72 9981.0 73 6376.0 74 6204.0 75 3924.0 76 1816.0 77 1670.0 78 1524.0 79 1087.5 80 651.0 81 469.5 82 288.0 83 169.0 84 50.0 85 31.5 86 13.0 87 10.0 88 7.0 89 5.5 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2786715.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.056907459250606 #Duplication Level Percentage of deduplicated Percentage of total 1 76.93706844328396 12.353713881798408 2 9.792564935026217 3.144766179008368 3 3.46762584242493 1.670380417653691 4 1.658558215706074 1.0652526314148898 5 0.9393364911222826 0.7541419555523835 6 0.5879200459630621 0.5664106662880352 7 0.41887504385863716 0.4708086471359373 8 0.32551603061197304 0.4181424624031231 9 0.26540083607093357 0.3835364997958849 >10 2.59691699177381 9.860110730232524 >50 1.1216132652096669 13.243305705486078 >100 1.8766383056847715 54.61151807344275 >500 0.010744578440782571 1.0922774126362909 >1k 0.0012209748228162016 0.3656347371516463 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3465 0.12433994864921602 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06075253479455201 0.0 2 0.0 0.0 0.0 0.2314194311223071 0.0 3 0.0 0.0 0.0 0.33365450001166247 0.0 4 0.0 0.0 0.0 0.5247038179361722 0.0 5 0.0 0.0 0.0 0.8981901629696614 0.0 6 0.0 0.0 0.0 1.2560667309000024 0.0 7 0.0 0.0 0.0 1.448120816086324 0.0 8 0.0 0.0 0.0 1.9088424901721202 0.0 9 0.0 0.0 0.0 2.0468903350360548 0.0 10 0.0 0.0 0.0 2.285271367900916 0.0 11 0.0 0.0 0.0 2.6610543238185462 0.0 12 0.0 0.0 0.0 2.9556664387998053 0.0 13 0.0 0.0 0.0 3.083164227414716 0.0 14 0.0 0.0 0.0 3.1363451232006145 0.0 15 0.0 0.0 0.0 3.212635666008185 0.0 16 0.0 0.0 0.0 3.3979434567223414 0.0 17 0.0 0.0 0.0 3.6288963887588075 0.0 18 0.0 0.0 0.0 3.875423213353357 0.0 19 0.0 0.0 0.0 4.042178694269059 0.0 20 0.0 0.0 0.0 4.197056390768342 0.0 21 0.0 0.0 0.0 4.41781811200643 0.0 22 0.0 0.0 0.0 4.650924116746779 0.0 23 0.0 0.0 0.0 4.89906574586924 0.0 24 3.5884545064708806E-5 0.0 0.0 5.078452586647719 0.0 25 3.5884545064708806E-5 0.0 0.0 5.229741828640532 0.0 26 3.5884545064708806E-5 0.0 0.0 5.378160307028168 0.0 27 3.5884545064708806E-5 0.0 0.0 5.535155191686268 0.0 28 3.5884545064708806E-5 0.0 0.0 5.699147562631988 0.0 29 3.5884545064708806E-5 0.0 0.0 5.879754477942667 0.0 30 7.176909012941761E-5 0.0 0.0 6.093267521077685 0.0 31 7.176909012941761E-5 0.0 0.0 6.295118087066672 0.0 32 1.0765363519412642E-4 0.0 0.0 6.474217851484633 0.0 33 1.0765363519412642E-4 0.0 0.0 6.652133425915459 0.0 34 1.0765363519412642E-4 0.0 0.0 6.8518668037456285 0.0 35 1.0765363519412642E-4 0.0 0.0 7.081348469434442 0.0 36 1.0765363519412642E-4 0.0 0.0 7.283378458148753 0.0 37 1.0765363519412642E-4 0.0 0.0 7.5016282612323115 0.0 38 1.0765363519412642E-4 0.0 0.0 7.729208046032695 0.0 39 1.0765363519412642E-4 0.0 0.0 8.047970459842503 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGGT 25 3.8922408E-5 45.000004 44 GTCGTTA 50 2.1827873E-11 45.000004 10 CGTACGT 25 3.8922408E-5 45.000004 34 ACGACCC 25 3.8922408E-5 45.000004 27 CTGTCGA 40 6.8212103E-9 45.0 43 CGACACG 20 7.03502E-4 45.0 15 TATGCGA 40 6.8212103E-9 45.0 19 ATCGTCC 20 7.03502E-4 45.0 43 CCGTATC 20 7.03502E-4 45.0 11 CTACGTA 40 6.8212103E-9 45.0 18 CGCTAGT 45 3.8562575E-10 45.0 36 ACCGTAT 20 7.03502E-4 45.0 10 CGACTTA 35 1.2127566E-7 45.0 42 ATCGATA 20 7.03502E-4 45.0 10 TCCGATC 30 2.16662E-6 44.999996 14 ATCCGCC 30 2.16662E-6 44.999996 18 CGCTACG 30 2.16662E-6 44.999996 33 CCGTTGA 30 2.16662E-6 44.999996 32 TACGTAC 30 2.16662E-6 44.999996 23 TTGTACG 110 0.0 42.954548 1 >>END_MODULE