SRR1545273_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545273_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2075682
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2449	0.11798531759681877	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTTACG	25	3.8918955E-5	45.000004	1
TCGATCT	25	3.8918955E-5	45.000004	15
ATCGTAC	25	3.8918955E-5	45.000004	16
CACCGTA	25	3.8918955E-5	45.000004	34
TACGTCA	25	3.8918955E-5	45.000004	32
CGCTTAT	25	3.8918955E-5	45.000004	33
ATCGTTC	20	7.0346025E-4	45.0	16
CATTACG	20	7.0346025E-4	45.0	12
CCGTACT	40	6.8193913E-9	45.0	33
TATAGCG	125	0.0	44.999996	1
ATACGAC	30	2.166351E-6	44.999996	22
ACGTTAG	65	0.0	41.53846	1
CGGGTAT	185	0.0	41.351353	6
TATCGTG	55	6.184564E-11	40.909092	1
GTACTAT	105	0.0	40.714287	39
CCGCAAT	50	1.0822987E-9	40.500004	33
TAATACG	45	1.929584E-8	40.0	1
CTTACCG	45	1.929584E-8	40.0	1
CGTATTT	395	0.0	39.873417	1
ATAGGGA	1725	0.0	39.782608	4