##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545273_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2075682 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.268251109755735 31.0 31.0 33.0 30.0 34.0 2 31.600036036348534 31.0 31.0 34.0 30.0 34.0 3 31.710303408710967 31.0 31.0 34.0 30.0 34.0 4 30.342374699014588 35.0 33.0 37.0 0.0 37.0 5 32.90571725341358 35.0 33.0 37.0 19.0 37.0 6 34.5437831999314 35.0 33.0 37.0 30.0 37.0 7 35.465860377456664 36.0 35.0 37.0 33.0 37.0 8 35.63089240066638 37.0 35.0 37.0 35.0 37.0 9 37.66487014870293 39.0 37.0 39.0 35.0 39.0 10 37.15568425221204 39.0 37.0 39.0 33.0 39.0 11 36.728342299061225 39.0 35.0 39.0 32.0 39.0 12 35.646462223018744 37.0 35.0 39.0 31.0 39.0 13 35.20498371137776 37.0 35.0 39.0 30.0 39.0 14 35.972741489303274 38.0 35.0 40.0 30.0 41.0 15 36.2756626496737 38.0 35.0 40.0 31.0 41.0 16 36.453598865336794 38.0 35.0 40.0 31.0 41.0 17 36.421426307112554 38.0 35.0 40.0 31.0 41.0 18 36.40783752039089 37.0 35.0 40.0 31.0 41.0 19 36.381192783865735 37.0 35.0 40.0 31.0 41.0 20 36.24564600935982 37.0 35.0 40.0 31.0 41.0 21 36.08224188483592 37.0 34.0 40.0 31.0 41.0 22 35.98755686082936 37.0 34.0 40.0 30.0 41.0 23 35.94589970910766 37.0 34.0 40.0 30.0 41.0 24 35.85033979193344 36.0 34.0 40.0 30.0 41.0 25 35.71219917116398 36.0 34.0 40.0 30.0 41.0 26 35.555952694102466 36.0 34.0 40.0 30.0 41.0 27 35.56359500154648 36.0 34.0 40.0 30.0 41.0 28 35.567949714840715 36.0 34.0 40.0 30.0 41.0 29 35.593872279087066 36.0 34.0 40.0 30.0 41.0 30 35.55240349918726 36.0 34.0 40.0 30.0 41.0 31 35.406027031115556 36.0 34.0 40.0 29.0 41.0 32 35.29129413850484 36.0 34.0 40.0 29.0 41.0 33 35.16284864444554 36.0 34.0 40.0 29.0 41.0 34 35.06081230169168 36.0 34.0 40.0 28.0 41.0 35 34.9044622442166 35.0 34.0 40.0 27.0 41.0 36 34.71567610067438 35.0 33.0 40.0 26.0 41.0 37 34.656466163892155 35.0 33.0 40.0 27.0 41.0 38 34.61604908651711 35.0 33.0 40.0 27.0 41.0 39 34.546350067110474 35.0 33.0 40.0 26.0 41.0 40 34.37964341358647 35.0 33.0 40.0 25.0 41.0 41 34.33106949908512 35.0 33.0 39.0 26.0 41.0 42 34.263488819578335 35.0 33.0 39.0 26.0 41.0 43 34.17958145804608 35.0 33.0 39.0 26.0 41.0 44 34.09312890895619 35.0 33.0 39.0 26.0 41.0 45 34.02809004462148 35.0 33.0 39.0 26.0 41.0 46 33.97473553270684 35.0 33.0 39.0 26.0 41.0 47 33.88078327990511 35.0 33.0 39.0 25.0 41.0 48 33.76286781886628 35.0 33.0 38.0 25.0 41.0 49 33.70823228220893 35.0 33.0 38.0 24.0 40.0 50 33.560180220284224 35.0 33.0 38.0 24.0 40.0 51 33.46954350425547 35.0 32.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 6.0 13 5.0 14 18.0 15 51.0 16 157.0 17 424.0 18 990.0 19 1916.0 20 3484.0 21 5458.0 22 8471.0 23 12337.0 24 17628.0 25 23608.0 26 30743.0 27 37331.0 28 45173.0 29 53856.0 30 67100.0 31 83770.0 32 106529.0 33 154823.0 34 231890.0 35 308986.0 36 160093.0 37 200998.0 38 246286.0 39 273405.0 40 143.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.91463624967601 25.34203216099576 28.940078489865016 11.803253099463213 2 29.77749000087682 26.019833481236525 31.271215918430666 12.931460599455985 3 29.238052842391077 26.29410478098283 29.819837528099196 14.648004848526893 4 23.11278895322116 39.165825979123966 25.1876250793715 12.53375998828337 5 23.7691033597632 32.96025113673482 28.775698782376107 14.494946721125876 6 22.67712491605169 41.12792807376081 25.428702469838825 10.766244540348666 7 89.78841653008504 4.238269638605528 4.143457427486484 1.8298564038229364 8 91.86893753474762 2.8538090131339966 3.436701768382633 1.8405516837357552 9 88.36787137914189 4.192983318253953 4.966126795915752 2.4730185066884043 10 60.62677230905312 20.267989027220935 8.658840805094423 10.446397858631524 11 51.14420224292546 19.84494734742605 15.056978862850862 13.95387154679763 12 45.55967628952797 20.26582106507644 18.883913817241755 15.290588828153831 13 23.55852197012837 38.56212078728823 20.816531626713534 17.062825615869865 14 17.440918213868983 39.07852937010583 25.399796307912293 18.0807561081129 15 17.082963575345357 21.80478512604532 44.832204547710106 16.28004675089922 16 20.41121905956693 17.479989709406354 41.9780582960203 20.13073293500642 17 21.582207679210978 18.517865453378697 23.910839907076326 35.989086960334 18 25.86822066193184 22.869447246736254 29.538484218680892 21.723847872651014 19 34.01903567116736 24.52803464114445 20.251753399605526 21.201176288082664 20 36.46642404761423 23.07169402634893 21.31641552029646 19.14546640574038 21 27.47410248776065 27.175501835059514 23.91980081727355 21.430594859906286 22 26.63876258502025 23.63093190575435 22.834518967741687 26.895786541483712 23 25.207088561735368 29.22726120860517 21.930478753489215 23.635171476170242 24 24.87881091612299 22.741103887782423 33.42944632173907 18.950638874355512 25 22.748812197629505 23.45701316482968 31.13439341864505 22.659781218895766 26 20.93278257459476 33.827773233086766 23.118762893352642 22.120681298965835 27 22.224358066409017 31.54399373314409 26.030673291958976 20.200974908487908 28 18.48154004322435 27.398416520449665 34.33767792947089 19.782365506855097 29 19.20616934578611 24.996266287417825 33.62620093058571 22.171363436210363 30 23.180622079875434 28.60659773510586 27.06724825864463 21.14553192637408 31 33.03531080387073 24.400702997858055 21.282498956969324 21.281487241301893 32 34.342495623125316 25.440553996228708 21.410505077367343 18.806445303278633 33 32.07341008882864 26.158004935245376 21.301095254475396 20.467489721450587 34 22.349858986106735 26.72644460953075 25.275307103882 25.648389300480517 35 24.10634191557281 24.504283411428148 27.826083186152793 23.563291486846254 36 33.57132739986183 23.92408856462599 22.477094275520045 20.027489759992136 37 23.83982710261013 31.107751572736092 25.339767844978176 19.712653479675595 38 24.73167855191691 30.93147216192076 21.01453883591032 23.32231045025201 39 24.410145677420722 30.187572084741305 23.42487914815468 21.977403089683296 40 28.175895922400446 23.545321489515253 23.399538079532416 24.87924450855189 41 20.80034417603467 22.296334409606093 24.943560718838434 31.9597606955208 42 24.99168947844612 24.249668301791893 22.00606836692711 28.75257385283487 43 24.41501154801169 25.017030547068387 23.39708105576866 27.170876849151266 44 21.928118083598548 28.67423815401396 26.369212625055283 23.028431137332213 45 20.980814980329356 33.287372535870134 20.565626141191185 25.166186342609322 46 23.497048199097936 30.666595364800582 23.65555032032845 22.180806115773034 47 23.92057164825826 25.401097085198987 25.681775917505668 24.996555349037088 48 26.131652150955688 21.236489982569584 28.97095990618987 23.66089796028486 49 23.437212443910003 22.036997960188508 29.672897871639297 24.852891724262193 50 20.684430466709255 31.636156212753207 24.169116463889942 23.510296856647596 51 20.3455057181206 32.87223187366851 21.93124958447392 24.85101282373697 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 305.0 1 775.0 2 1245.0 3 3343.5 4 5442.0 5 4119.5 6 2797.0 7 2932.0 8 3067.0 9 3358.5 10 3650.0 11 3660.5 12 3671.0 13 3530.0 14 3389.0 15 3352.5 16 3316.0 17 3416.0 18 3516.0 19 3389.0 20 3262.0 21 3182.5 22 3103.0 23 3633.5 24 4164.0 25 4922.5 26 7143.0 27 8605.0 28 11632.0 29 14659.0 30 17661.5 31 20664.0 32 23792.5 33 26921.0 34 31380.5 35 35840.0 36 37392.5 37 38945.0 38 51976.0 39 65007.0 40 96418.0 41 127829.0 42 156725.5 43 185622.0 44 189839.5 45 194057.0 46 174111.0 47 154165.0 48 149411.0 49 144657.0 50 139602.0 51 134547.0 52 128483.5 53 122420.0 54 117809.5 55 113199.0 56 111454.0 57 109709.0 58 114684.0 59 119659.0 60 114487.0 61 109315.0 62 100187.0 63 91059.0 64 79598.5 65 68138.0 66 57553.0 67 46968.0 68 40173.0 69 33378.0 70 29617.0 71 25856.0 72 20482.0 73 15108.0 74 12465.0 75 8142.0 76 6462.0 77 4835.5 78 3209.0 79 2693.0 80 2177.0 81 1397.0 82 617.0 83 441.0 84 265.0 85 156.0 86 47.0 87 39.5 88 32.0 89 70.5 90 109.0 91 57.0 92 5.0 93 3.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2075682.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.528079569958894 #Duplication Level Percentage of deduplicated Percentage of total 1 79.20202735052604 13.09057410151555 2 8.079024100940751 2.6706150637592874 3 2.638194357106383 1.3081285876581255 4 1.2576553558876582 0.8314651117478474 5 0.7377612358266046 0.6096888204686665 6 0.48091386457059254 0.4769149571951513 7 0.37190427630016587 0.43028044297679846 8 0.3016399343822441 0.39884230695575285 9 0.23094105326794787 0.3435310893944482 >10 3.246572934505909 13.403359796027248 >50 1.666791579528212 20.160925394405304 >100 1.7779953519924094 45.13906076063371 >500 0.007307700696178194 0.7943796632773056 >1k 0.0012709044689005555 0.34223390398480863 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2449 0.11798531759681877 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05198291453122395 0.0 2 0.0 0.0 0.0 0.1576349363727199 0.0 3 0.0 0.0 0.0 0.22089125405529364 0.0 4 0.0 0.0 0.0 0.3742866200121213 0.0 5 0.0 0.0 0.0 0.6231204972630683 0.0 6 0.0 0.0 0.0 0.8879009405101552 0.0 7 0.0 0.0 0.0 1.021591939420393 0.0 8 0.0 0.0 0.0 1.3521820779868978 0.0 9 0.0 0.0 0.0 1.4429474264362268 0.0 10 0.0 0.0 0.0 1.6099286884985273 0.0 11 0.0 0.0 0.0 1.8829955648312218 0.0 12 0.0 0.0 0.0 2.096901163087602 0.0 13 0.0 0.0 0.0 2.19335139004915 0.0 14 0.0 0.0 0.0 2.232326531713432 0.0 15 0.0 0.0 0.0 2.292692233203352 0.0 16 0.0 0.0 0.0 2.4258532858116033 0.0 17 4.81769365442298E-5 0.0 0.0 2.563735678201189 0.0 18 9.63538730884596E-5 0.0 0.0 2.7298015784691487 0.0 19 9.63538730884596E-5 0.0 0.0 2.8372361469627814 0.0 20 9.63538730884596E-5 0.0 0.0 2.945971492743108 0.0 21 9.63538730884596E-5 0.0 0.0 3.09690983493618 0.0 22 9.63538730884596E-5 0.0 0.0 3.2424523602362982 0.0 23 9.63538730884596E-5 0.0 0.0 3.401532604705345 0.0 24 9.63538730884596E-5 0.0 0.0 3.519999691667606 0.0 25 9.63538730884596E-5 0.0 0.0 3.6200631888699712 0.0 26 9.63538730884596E-5 0.0 0.0 3.7239808409958752 0.0 27 9.63538730884596E-5 0.0 0.0 3.8320417096645825 0.0 28 9.63538730884596E-5 0.0 0.0 3.9396208089678475 0.0 29 1.445308096326894E-4 0.0 0.0 4.063146474267253 0.0 30 1.927077461769192E-4 0.0 0.0 4.219480633353278 0.0 31 1.927077461769192E-4 0.0 0.0 4.361602596158757 0.0 32 1.927077461769192E-4 0.0 0.0 4.486958985046843 0.0 33 1.927077461769192E-4 0.0 0.0 4.613567974285078 0.0 34 1.927077461769192E-4 0.0 0.0 4.754533690613495 0.0 35 1.927077461769192E-4 0.0 0.0 4.938665942085541 0.0 36 2.40884682721149E-4 0.0 0.0 5.080498843271753 0.0 37 2.40884682721149E-4 0.0 0.0 5.24584208949155 0.0 38 2.890616192653788E-4 0.0 0.0 5.4291553330423445 0.0 39 2.890616192653788E-4 0.0 0.0 5.735319764780925 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTTACG 25 3.8918955E-5 45.000004 1 TCGATCT 25 3.8918955E-5 45.000004 15 ATCGTAC 25 3.8918955E-5 45.000004 16 CACCGTA 25 3.8918955E-5 45.000004 34 TACGTCA 25 3.8918955E-5 45.000004 32 CGCTTAT 25 3.8918955E-5 45.000004 33 ATCGTTC 20 7.0346025E-4 45.0 16 CATTACG 20 7.0346025E-4 45.0 12 CCGTACT 40 6.8193913E-9 45.0 33 TATAGCG 125 0.0 44.999996 1 ATACGAC 30 2.166351E-6 44.999996 22 ACGTTAG 65 0.0 41.53846 1 CGGGTAT 185 0.0 41.351353 6 TATCGTG 55 6.184564E-11 40.909092 1 GTACTAT 105 0.0 40.714287 39 CCGCAAT 50 1.0822987E-9 40.500004 33 TAATACG 45 1.929584E-8 40.0 1 CTTACCG 45 1.929584E-8 40.0 1 CGTATTT 395 0.0 39.873417 1 ATAGGGA 1725 0.0 39.782608 4 >>END_MODULE