##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545271_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2077513 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.266802662606683 31.0 31.0 33.0 30.0 34.0 2 31.6018099525731 31.0 31.0 34.0 30.0 34.0 3 31.714594325041528 31.0 31.0 34.0 30.0 34.0 4 30.328689158623796 35.0 33.0 37.0 0.0 37.0 5 32.894743859605214 35.0 33.0 37.0 19.0 37.0 6 34.534713380854896 35.0 33.0 37.0 30.0 37.0 7 35.49364745250691 36.0 35.0 37.0 33.0 37.0 8 35.67245981132248 37.0 35.0 37.0 35.0 37.0 9 37.72547079127784 39.0 37.0 39.0 35.0 39.0 10 37.12933878151424 39.0 37.0 39.0 33.0 39.0 11 36.6958483532955 39.0 35.0 39.0 32.0 39.0 12 35.742030976460796 37.0 35.0 39.0 31.0 39.0 13 35.364761616413475 37.0 35.0 39.0 30.0 39.0 14 36.16943865092541 38.0 35.0 40.0 30.0 41.0 15 36.484542816338575 38.0 35.0 40.0 31.0 41.0 16 36.64563157968205 38.0 35.0 40.0 32.0 41.0 17 36.60498442127679 38.0 35.0 40.0 32.0 41.0 18 36.55163168654059 38.0 35.0 40.0 31.0 41.0 19 36.55045239187432 38.0 35.0 40.0 31.0 41.0 20 36.42626207393167 38.0 35.0 40.0 31.0 41.0 21 36.25501549208116 38.0 35.0 40.0 31.0 41.0 22 36.1675440779432 37.0 35.0 40.0 30.0 41.0 23 36.12738933522919 37.0 34.0 40.0 31.0 41.0 24 36.06799042894076 37.0 34.0 40.0 30.0 41.0 25 35.94741452881402 37.0 34.0 40.0 30.0 41.0 26 35.821380660433896 37.0 34.0 40.0 30.0 41.0 27 35.813826435743124 37.0 34.0 40.0 30.0 41.0 28 35.824478595320464 37.0 34.0 40.0 30.0 41.0 29 35.82439291595287 37.0 34.0 40.0 30.0 41.0 30 35.77509599217911 37.0 34.0 40.0 30.0 41.0 31 35.62794264103281 36.0 34.0 40.0 30.0 41.0 32 35.54479033344196 36.0 34.0 40.0 29.0 41.0 33 35.41375769971115 36.0 34.0 40.0 29.0 41.0 34 35.29970642782981 36.0 34.0 40.0 29.0 41.0 35 35.170570773805025 36.0 34.0 40.0 28.0 41.0 36 35.00630994848167 36.0 34.0 40.0 27.0 41.0 37 34.959092434078634 36.0 34.0 40.0 27.0 41.0 38 34.920203628088004 36.0 33.0 40.0 27.0 41.0 39 34.867031878982225 36.0 34.0 40.0 27.0 41.0 40 34.7611369940886 36.0 34.0 40.0 27.0 41.0 41 34.718152906865086 36.0 34.0 40.0 26.0 41.0 42 34.64605227500382 35.0 33.0 40.0 26.0 41.0 43 34.56506361211699 35.0 33.0 40.0 26.0 41.0 44 34.49617210578225 35.0 33.0 40.0 26.0 41.0 45 34.40139628488486 35.0 33.0 40.0 26.0 41.0 46 34.36471492597158 35.0 33.0 40.0 26.0 41.0 47 34.30093481966178 35.0 33.0 39.0 26.0 41.0 48 34.18959688820238 35.0 33.0 39.0 26.0 41.0 49 34.12623507049053 35.0 33.0 39.0 26.0 41.0 50 33.97251377007027 35.0 33.0 39.0 25.0 41.0 51 33.88361420602422 35.0 33.0 39.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 3.0 13 10.0 14 10.0 15 52.0 16 118.0 17 379.0 18 888.0 19 1772.0 20 3151.0 21 4990.0 22 7812.0 23 11664.0 24 16378.0 25 22416.0 26 29216.0 27 35989.0 28 43067.0 29 52029.0 30 63760.0 31 79107.0 32 101403.0 33 146337.0 34 218356.0 35 290959.0 36 159393.0 37 201064.0 38 262715.0 39 324345.0 40 127.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.6939951759628 24.373902834783706 30.772900097376045 12.159201891877451 2 28.337151199535214 26.35906490115826 31.558502883014448 13.745281016292077 3 29.633942122143157 25.594881957417353 31.080238727748032 13.690937192691454 4 22.096371960127325 38.72442675448962 26.085661076489053 13.093540208894 5 22.89809979528407 32.590842993521576 29.822099789507934 14.68895742168641 6 21.942534174274723 40.880803152615655 26.389774696957375 10.786887976152256 7 90.40703957087152 3.80113144899695 4.166279585254099 1.6255493948774329 8 92.69506376133386 2.1600346183152643 3.582793465070977 1.5621081552798948 9 89.4918106408961 3.498076787004462 4.802232284467053 2.207880287632376 10 57.40493561291795 20.646224596428517 11.039882782923621 10.908957007729915 11 47.37919810850762 21.34658122476249 17.859094022516345 13.415126644213537 12 41.724696788900964 22.43355396572729 20.64068913166849 15.20106011370326 13 21.985807068355285 38.57511360939739 22.519088929888767 16.919990392358557 14 16.158117903474007 39.670991228454405 27.147892696700332 17.02299817137125 15 16.330728135034533 23.000241153725632 44.70956379093657 15.959466920303267 16 18.861446354366976 19.357568400294006 41.70934189100141 20.071643354337613 17 19.600936311830537 20.137202510886816 26.554153933092117 33.70770724419053 18 24.175251851612963 23.24885572316515 31.06579838489579 21.510094040326102 19 31.400477397734694 24.91950712221777 22.933815576605294 20.746199903442243 20 33.286578712142834 24.711229243812195 23.109073204355397 18.89311883968957 21 24.96335763001242 27.062357732538857 27.128157561468928 20.84612707597979 22 24.99286406390718 24.47633300008231 24.910698513077897 25.62010442293261 23 22.147442639348107 29.010793193592534 25.01505405742347 23.826710109635897 24 22.394613174502396 23.497422158128494 35.2268313122469 18.881133355122206 25 20.2879115557881 25.817503909722827 31.961821658877703 21.932762875611367 26 18.864912036651514 34.98818057937544 24.863671129855746 21.283236254117302 27 19.203153000727312 33.12417298953123 28.453299690543453 19.219374319198003 28 18.02742028569737 27.85099299017623 35.92367412382016 18.197912600306232 29 18.03377403655236 25.273728732383383 35.511739276721734 21.180757954342525 30 21.563234502022368 29.142970465166762 28.83880871022227 20.454986322588596 31 30.15056945492038 26.18592519035982 23.21362128660567 20.449884068114134 32 32.09582804054656 25.728695801181512 23.833882146585847 18.341594011686087 33 27.95770712385434 26.646523992870318 24.538089533013753 20.857679350261588 34 20.373687192330443 27.097014555384252 28.16444469902234 24.364853553262964 35 22.15678072772589 25.183091513747446 29.63004322957305 23.03008452895361 36 30.56495916030369 24.73688491961302 24.87445325251876 19.823702667564536 37 21.911054226856823 30.573382693634166 27.291092763318446 20.22447031619056 38 22.11658844012047 32.246344547543146 22.888761706906287 22.748305305430097 39 22.203711841995695 29.742389096963535 25.55651877990655 22.497380281134223 40 25.09360952253969 24.819050470442303 24.796619804545145 25.290720202472862 41 19.80974366947403 23.221467206222055 27.11809745594853 29.850691668355385 42 22.83773916216168 25.806866190488336 24.198308265700383 27.1570863816496 43 23.059542828372194 26.05947592145031 25.6862411931959 25.19474005698159 44 21.152406747875947 29.527276122941227 27.25013032409424 22.070186805088586 45 19.573547794887443 34.27343174266539 22.44650213981814 23.706518322629027 46 22.57569507386957 30.91075723713883 24.69813666629282 21.815411022698775 47 21.6585407648472 27.01619676988784 26.701156623327986 24.62410584193697 48 23.963412021970502 23.160336421480878 30.177380358149385 22.69887119839924 49 21.828744272599014 23.700982857869 30.19470876957208 24.275564099959904 50 20.210848259433277 31.66040356907514 26.117526099716343 22.011222071775244 51 19.598000108783918 33.06491944936084 23.593691110476804 23.74338933137843 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 312.0 1 718.5 2 1125.0 3 3907.0 4 6689.0 5 4875.0 6 3061.0 7 3305.0 8 3549.0 9 3821.5 10 4094.0 11 4131.0 12 4168.0 13 4070.0 14 3972.0 15 3854.5 16 3737.0 17 3639.0 18 3541.0 19 3940.5 20 4340.0 21 4406.0 22 4472.0 23 5991.5 24 7511.0 25 8849.5 26 13118.5 27 16049.0 28 20132.0 29 24215.0 30 26481.0 31 28747.0 32 35235.5 33 41724.0 34 49237.0 35 56750.0 36 56984.5 37 57219.0 38 72080.5 39 86942.0 40 118393.0 41 149844.0 42 174537.0 43 199230.0 44 195738.5 45 192247.0 46 183303.0 47 174359.0 48 165882.5 49 157406.0 50 150252.0 51 143098.0 52 132921.0 53 122744.0 54 111511.0 55 100278.0 56 95693.5 57 91109.0 58 89015.5 59 86922.0 60 83517.5 61 80113.0 62 71881.5 63 63650.0 64 55392.5 65 47135.0 66 40645.0 67 34155.0 68 29100.0 69 24045.0 70 19985.5 71 15926.0 72 13540.5 73 11155.0 74 8650.0 75 4659.5 76 3174.0 77 2230.5 78 1287.0 79 1018.0 80 749.0 81 504.5 82 260.0 83 155.5 84 51.0 85 35.5 86 20.0 87 12.5 88 5.0 89 3.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2077513.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.432583011956478 #Duplication Level Percentage of deduplicated Percentage of total 1 78.56726761948583 14.481976824187731 2 8.902310854747727 3.2818516765675736 3 3.015152349448647 1.6673113792472338 4 1.3929132098571348 1.0269995347656957 5 0.7720402187751779 0.7115347710571254 6 0.4969007026059427 0.5495498069690123 7 0.34939762688817255 0.45082105332577865 8 0.25831223948563237 0.3809089437858641 9 0.21477299176840384 0.3562938899547614 >10 2.935173953661578 13.675809569885503 >50 1.5525679764009168 21.02616850030342 >100 1.5400652397863486 41.795272685567944 >500 0.0019886472382019136 0.2270571505418615 >1k 0.0011363698504010936 0.3684442138405299 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3340 0.16076915042168208 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.058146447218380824 0.0 2 0.0 0.0 0.0 0.17785688946350756 0.0 3 0.0 0.0 0.0 0.24741120753516344 0.0 4 0.0 0.0 0.0 0.3721757697785766 0.0 5 0.0 0.0 0.0 0.6124149403637907 0.0 6 0.0 0.0 0.0 0.8604518960892182 0.0 7 0.0 0.0 0.0 0.9949877569959851 0.0 8 0.0 0.0 0.0 1.3174887473628323 0.0 9 0.0 0.0 0.0 1.407644621237027 0.0 10 0.0 0.0 0.0 1.566825333944962 0.0 11 0.0 0.0 0.0 1.8319018942360408 0.0 12 0.0 0.0 0.0 2.02448793340884 0.0 13 0.0 0.0 0.0 2.109300880427704 0.0 14 0.0 0.0 0.0 2.147327116605287 0.0 15 0.0 0.0 0.0 2.199986233539814 0.0 16 0.0 0.0 0.0 2.32802394016307 0.0 17 0.0 0.0 0.0 2.476566933636516 0.0 18 0.0 0.0 0.0 2.6425827419611814 0.0 19 0.0 0.0 0.0 2.7478528413540615 0.0 20 0.008953012568393074 0.0 0.0 2.854278168175121 0.0 21 0.008953012568393074 0.0 0.0 3.001136454982472 0.0 22 0.008953012568393074 0.0 0.0 3.1491018347418285 0.0 23 0.00900114704456723 0.0 0.0 3.3175243668752015 0.0 24 0.00900114704456723 0.0 0.0 3.4442143081655807 0.0 25 0.00900114704456723 0.0 0.0 3.555693754984927 0.0 26 0.00900114704456723 0.0 0.0 3.657786978950312 0.0 27 0.00900114704456723 0.0 0.0 3.7684962741508716 0.0 28 0.00900114704456723 0.0 0.0 3.875162273352802 0.0 29 0.00900114704456723 0.0 0.0 4.001707811214659 0.0 30 0.00900114704456723 0.0 0.0 4.146496315546521 0.0 31 0.00900114704456723 0.0 0.0 4.289937054545507 0.0 32 0.00900114704456723 0.0 0.0 4.409984438123853 0.0 33 0.00900114704456723 0.0 0.0 4.541006482269906 0.0 34 0.00900114704456723 0.0 0.0 4.6825699766981 0.0 35 0.00900114704456723 0.0 0.0 4.857490663114984 0.0 36 0.00900114704456723 0.0 0.0 5.008440380397138 0.0 37 0.00900114704456723 0.0 0.0 5.160978535393039 0.0 38 0.00900114704456723 0.0 0.0 5.331422715525727 0.0 39 0.00900114704456723 0.0 0.0 5.588797759628941 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACCG 35 1.2125565E-7 45.0 35 GTCGAAC 25 3.8918974E-5 45.0 18 ACGCATA 20 7.0346036E-4 45.0 31 TTATCCG 35 1.2125565E-7 45.0 1 TGTAACG 35 1.2125565E-7 45.0 1 ATCGCAA 35 1.2125565E-7 45.0 14 CCCGCTA 20 7.0346036E-4 45.0 16 CTACGAT 30 2.1663527E-6 44.999996 16 CGTCGGT 30 2.1663527E-6 44.999996 17 CGGTCTA 110 0.0 42.954548 31 TCGATAG 140 0.0 41.785713 1 CGTTTTT 2655 0.0 40.593224 1 CCGAACA 40 3.460027E-7 39.375 37 ACTCACG 40 3.460027E-7 39.375 39 CGATACG 40 3.460027E-7 39.375 10 ATAGGGC 1465 0.0 39.317406 4 CGTTGAT 225 0.0 39.0 25 CGTATTT 525 0.0 38.999996 1 GCGCGAC 575 0.0 38.739132 9 TACGATA 35 6.250726E-6 38.571426 17 >>END_MODULE