##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545270_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2472328 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.275347364912747 31.0 31.0 33.0 30.0 34.0 2 31.59282667995509 31.0 31.0 34.0 30.0 34.0 3 31.691126743700675 31.0 31.0 34.0 30.0 34.0 4 30.30321219514563 35.0 33.0 37.0 0.0 37.0 5 32.871782384861554 35.0 33.0 37.0 19.0 37.0 6 34.48939784688763 35.0 33.0 37.0 30.0 37.0 7 35.49787083267269 36.0 35.0 37.0 33.0 37.0 8 35.6854770079051 37.0 35.0 37.0 35.0 37.0 9 37.73171884960248 39.0 37.0 39.0 35.0 39.0 10 37.15282964072728 39.0 37.0 39.0 33.0 39.0 11 36.70463870489676 39.0 35.0 39.0 32.0 39.0 12 35.56496710792419 37.0 35.0 39.0 31.0 39.0 13 35.09220216734996 37.0 35.0 39.0 30.0 39.0 14 35.90180833611074 37.0 35.0 40.0 30.0 41.0 15 36.267173287686745 37.0 35.0 40.0 31.0 41.0 16 36.46178783721254 37.0 35.0 40.0 32.0 41.0 17 36.408667862840204 37.0 35.0 40.0 32.0 41.0 18 36.391082817490236 37.0 35.0 40.0 31.0 41.0 19 36.36265819098437 37.0 35.0 40.0 31.0 41.0 20 36.254520840276854 37.0 35.0 40.0 31.0 41.0 21 36.0806717393485 37.0 34.0 40.0 31.0 41.0 22 35.930898731883474 37.0 34.0 40.0 30.0 41.0 23 35.906819807080616 36.0 34.0 40.0 30.0 41.0 24 35.83012812215855 36.0 34.0 40.0 30.0 41.0 25 35.710400076365275 36.0 34.0 40.0 30.0 41.0 26 35.54847051038535 36.0 34.0 40.0 30.0 41.0 27 35.57228814299721 36.0 34.0 40.0 30.0 41.0 28 35.60480365064829 36.0 34.0 40.0 30.0 41.0 29 35.684113111205306 36.0 34.0 40.0 30.0 41.0 30 35.6581452784582 36.0 34.0 40.0 30.0 41.0 31 35.54679193052055 36.0 34.0 40.0 30.0 41.0 32 35.44089093356545 36.0 34.0 40.0 30.0 41.0 33 35.29022726757938 36.0 34.0 40.0 29.0 41.0 34 35.23209865357671 36.0 34.0 40.0 29.0 41.0 35 35.128915338094295 35.0 34.0 40.0 29.0 41.0 36 34.93520681721843 35.0 34.0 40.0 27.0 41.0 37 34.853650082027954 35.0 33.0 40.0 27.0 41.0 38 34.85173609650499 35.0 33.0 40.0 27.0 41.0 39 34.811259266569806 35.0 34.0 40.0 27.0 41.0 40 34.68226748230817 35.0 33.0 40.0 27.0 41.0 41 34.67256609964374 35.0 34.0 40.0 27.0 41.0 42 34.63134543636605 35.0 33.0 40.0 27.0 41.0 43 34.56684469051032 35.0 33.0 40.0 27.0 41.0 44 34.486738410113865 35.0 33.0 40.0 27.0 41.0 45 34.39932848715866 35.0 33.0 39.0 27.0 41.0 46 34.34131393569138 35.0 33.0 39.0 27.0 41.0 47 34.29391731194243 35.0 33.0 39.0 27.0 41.0 48 34.210991421850174 35.0 33.0 39.0 26.0 41.0 49 34.185195491860306 35.0 33.0 39.0 26.0 41.0 50 34.02328210496342 35.0 33.0 39.0 26.0 41.0 51 33.942328849570124 35.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 6.0 14 13.0 15 44.0 16 160.0 17 366.0 18 1007.0 19 1879.0 20 3535.0 21 5916.0 22 9050.0 23 13433.0 24 18885.0 25 25707.0 26 34080.0 27 42507.0 28 51131.0 29 62259.0 30 77171.0 31 97416.0 32 125164.0 33 183682.0 34 277649.0 35 383947.0 36 178967.0 37 223365.0 38 290876.0 39 363840.0 40 273.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.85879867072654 25.267318899434056 30.699365132781736 12.17451729705767 2 27.59132283418705 26.78920434505454 31.69272038337955 13.926752437378859 3 29.12922557201148 26.123475525901096 31.012187703249733 13.735111198837693 4 21.786915004805188 39.16070197805469 25.9840522778531 13.06833073928702 5 23.129495762698156 34.2865914231445 28.618613711449292 13.965299102708054 6 21.41212654631586 40.97093913105381 26.165379350959906 11.451554971670426 7 90.46247099899367 4.264240019932631 3.692754359453924 1.5805346216197849 8 92.56437657139344 2.482922977857307 3.1937509909688355 1.7589494597804174 9 89.08356819968871 4.453454396018651 4.363175112687314 2.099802291605321 10 58.50324067033177 24.143155762504005 8.607797994440867 8.74580557272336 11 51.06478590219421 18.8304707142418 17.07694124727787 13.027802136286123 12 47.45409994143172 20.562562896185295 18.57783433266136 13.405502829721621 13 21.934913166861357 42.429119437226774 18.8358502593507 16.80011713656117 14 14.622048530777471 44.56010691138069 23.50258541746888 17.31525914037296 15 14.10925249400565 23.933151264718923 47.36576214806449 14.591834093210934 16 15.878152089852154 18.018482984458373 47.14443229215541 18.95893263353406 17 16.786445811397193 19.33266945162616 25.536174811756368 38.34470992522028 18 22.955489724664364 24.505526774764512 30.82790794748917 21.711075553081955 19 32.25858381250384 25.730121569629922 21.23896991014137 20.772324707724866 20 36.23216660572545 23.308031943981543 21.63572147384975 18.824079976443254 21 24.79205833530179 29.38465284541533 23.85435913034193 21.96892968894095 22 23.494172294291047 26.303791406318254 22.204497137920214 27.997539161470485 23 22.275199730780056 31.865432094770597 21.787238586465875 24.072129587983472 24 22.759075656628085 22.54191191460033 36.73258564397604 17.966426784795544 25 18.915370452464238 25.79370536595468 32.81142307978553 22.479501101795556 26 17.72410456864947 38.15331137292463 23.731357651573738 20.391226406852166 27 19.75688500878524 35.35813209250552 25.69206027679175 19.19292262191748 28 15.788277283596674 29.6474011538922 37.66239754595668 16.90192401655444 29 16.42921165800007 24.85305347834106 36.02361822541346 22.69411663824541 30 19.85339323908478 31.526803886862908 27.90119272200129 20.718610152051024 31 30.53830236117538 27.95777906491372 20.56122812183497 20.942690452075936 32 33.54672195598643 27.383421617196426 21.462524389967676 17.60733203684948 33 29.792891558078054 29.073245944712838 21.147841224950735 19.986021272258373 34 19.571149135551593 28.36371225824405 26.414577677395556 25.650560928808797 35 21.65416562850884 25.130443856963964 28.72806520817626 24.48732530635094 36 31.597951404506198 25.67466776252989 22.84227659113192 19.885104241831993 37 21.977868632317396 33.751144670124674 26.085980500969125 18.1850061965888 38 21.305263702874374 33.409725570393576 21.681548726544374 23.603462000187676 39 22.89554622202232 31.79735860290382 24.595199342482065 20.711895832591793 40 26.49430010904702 25.64328034144337 23.359198294077483 24.503221255432127 41 17.184532149455897 23.959725408602743 26.967416944677243 31.88832549726412 42 23.06858151507405 26.18167977711695 21.420580117201276 29.32915859060772 43 22.64917923511767 27.094827223572278 23.427029099698746 26.82896444161131 44 20.901191104092984 30.978980135321848 26.054754870712948 22.065073889872217 45 18.2892803867448 37.14741733297524 20.203791729899915 24.359510550380048 46 21.984785190314554 34.32643241511644 22.660423697826502 21.0283586967425 47 22.113692034390258 27.20593707631026 25.84859290514851 24.83177798415097 48 23.722014231121438 21.543419805139123 30.7796538323394 23.954912131400043 49 19.98974246135626 24.619710653279014 31.116340550282974 24.274206335081754 50 18.727409955313373 33.27657171702136 24.92318980329471 23.072828524370554 51 17.302679903313802 35.586661640364866 22.11086069485926 24.999797761462073 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 322.0 1 639.0 2 956.0 3 3276.5 4 5597.0 5 4172.0 6 2747.0 7 3049.0 8 3351.0 9 3621.5 10 3892.0 11 3974.0 12 4056.0 13 4068.0 14 4080.0 15 3887.5 16 3695.0 17 4041.5 18 4388.0 19 4197.0 20 4006.0 21 3918.0 22 3830.0 23 4822.5 24 5815.0 25 7930.5 26 13061.0 27 16076.0 28 21662.5 29 27249.0 30 30941.5 31 34634.0 32 40436.5 33 46239.0 34 54000.0 35 61761.0 36 62666.5 37 63572.0 38 82115.5 39 100659.0 40 143836.0 41 187013.0 42 223806.0 43 260599.0 44 261765.0 45 262931.0 46 242507.5 47 222084.0 48 207947.5 49 193811.0 50 177414.0 51 161017.0 52 152459.0 53 143901.0 54 128953.0 55 114005.0 56 107242.0 57 100479.0 58 102373.5 59 104268.0 60 104754.0 61 105240.0 62 90703.0 63 76166.0 64 61709.0 65 47252.0 66 39038.0 67 30824.0 68 26483.0 69 22142.0 70 17599.5 71 13057.0 72 10440.0 73 7823.0 74 6619.0 75 4376.5 76 3338.0 77 2793.5 78 2249.0 79 1544.0 80 839.0 81 705.0 82 571.0 83 385.0 84 199.0 85 143.0 86 87.0 87 59.5 88 32.0 89 21.0 90 10.0 91 7.0 92 4.0 93 2.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2472328.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.450645011160091 #Duplication Level Percentage of deduplicated Percentage of total 1 77.81467213541615 12.022868758241255 2 9.47579573316353 2.928143121427503 3 3.287960496325917 1.5240333131834845 4 1.6171466157830088 0.9994383316584867 5 0.903245687161406 0.6977864235096123 6 0.557160673464025 0.516509506792292 7 0.38125818118205024 0.412347937053109 8 0.2893642089149459 0.3576690936703997 9 0.21628690344505297 0.3007594949123315 >10 2.3613712450890647 8.870508349182646 >50 1.1605108893374885 13.147692823628368 >100 1.9152676158434423 55.7493601764983 >500 0.016537966609796204 1.5838414579800435 >1k 0.0034216482640957667 0.8890412122621701 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2975 0.1203319300675315 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2912 0.11778372448963083 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2548 0.10306075892842698 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05124724551111341 0.0 2 0.0 0.0 0.0 0.18286408599506215 0.0 3 0.0 0.0 0.0 0.2694626279360991 0.0 4 0.0 0.0 0.0 0.4782536944936109 0.0 5 4.044770758572487E-5 0.0 0.0 0.8098035535737976 0.0 6 4.044770758572487E-5 0.0 0.0 1.1498474312469866 0.0 7 4.044770758572487E-5 0.0 0.0 1.326967942764876 0.0 8 4.044770758572487E-5 0.0 0.0 1.7877482275814536 0.0 9 4.044770758572487E-5 0.0 0.0 1.9128934348516864 0.0 10 8.089541517144974E-5 0.0 0.0 2.1292482227277287 0.0 11 8.089541517144974E-5 0.0 0.0 2.464559718613388 0.0 12 8.089541517144974E-5 0.0 0.0 2.7298157849605715 0.0 13 8.089541517144974E-5 0.0 0.0 2.836638180694471 0.0 14 8.089541517144974E-5 0.0 0.0 2.876964545157439 0.0 15 8.089541517144974E-5 0.0 0.0 2.9380405836118832 0.0 16 8.089541517144974E-5 0.0 0.0 3.0813872592956923 0.0 17 8.089541517144974E-5 0.0 0.0 3.260206574532182 0.0 18 8.089541517144974E-5 0.0 0.0 3.4658022721904214 0.0 19 8.089541517144974E-5 0.0 0.0 3.592565387764083 0.0 20 1.2134312275717462E-4 0.0 0.0 3.7232114832659744 0.0 21 1.2134312275717462E-4 0.0 0.0 3.9062778077989653 0.0 22 1.2134312275717462E-4 0.0 0.0 4.101114415239402 0.0 23 1.2134312275717462E-4 0.0 0.0 4.323738597791231 0.0 24 1.2134312275717462E-4 0.0 0.0 4.4794622719962724 0.0 25 1.2134312275717462E-4 0.0 0.0 4.605780462786491 0.0 26 1.2134312275717462E-4 0.0 0.0 4.730157163612595 0.0 27 2.0223853792862434E-4 0.0 0.0 4.846808352289826 0.0 28 2.0223853792862434E-4 0.0 0.0 4.970537889794558 0.0 29 2.4268624551434923E-4 0.0 0.0 5.098676227426134 0.0 30 2.4268624551434923E-4 0.0 0.0 5.265644364340007 0.0 31 2.4268624551434923E-4 0.0 0.0 5.443331143764096 0.0 32 2.831339531000741E-4 0.0 0.0 5.593311243491964 0.0 33 2.831339531000741E-4 0.0 0.0 5.736819710006116 0.0 34 3.2358166068579896E-4 0.0 0.0 5.900228448652444 0.0 35 3.2358166068579896E-4 0.0 0.0 6.1120530932788855 0.0 36 3.2358166068579896E-4 0.0 0.0 6.300175381260091 0.0 37 3.2358166068579896E-4 0.0 0.0 6.484616927850997 0.0 38 3.2358166068579896E-4 0.0 0.0 6.650209842706955 0.0 39 3.2358166068579896E-4 0.0 0.0 6.828705576282759 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGATCG 20 7.034863E-4 45.000004 16 CGTGCGC 20 7.034863E-4 45.000004 27 CGACACT 20 7.034863E-4 45.000004 40 ACTTACG 40 6.8212103E-9 45.000004 38 CTACGTT 20 7.034863E-4 45.000004 30 GCGTGTT 20 7.034863E-4 45.000004 36 ATACGTC 40 6.8212103E-9 45.000004 20 ATCGGCC 40 6.8212103E-9 45.000004 30 CTTACGA 20 7.034863E-4 45.000004 31 CGAACGC 25 3.8921142E-5 45.0 24 GACACGC 35 1.2126839E-7 45.0 33 CGACATA 25 3.8921142E-5 45.0 23 TCTAGCG 45 3.8562575E-10 45.0 1 TAGCCGT 35 1.2126839E-7 45.0 44 ATATACG 50 2.1827873E-11 45.0 1 TATTACG 100 0.0 45.0 1 CGAATCC 45 3.8562575E-10 45.0 28 TCATCGG 35 1.2126839E-7 45.0 2 CCGCGAA 25 3.8921142E-5 45.0 33 CTATGCG 130 0.0 44.999996 1 >>END_MODULE