##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545269_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2239293 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.199496448209324 31.0 31.0 33.0 30.0 34.0 2 31.528603001036487 31.0 31.0 34.0 30.0 34.0 3 31.642756441430397 31.0 31.0 34.0 30.0 34.0 4 30.318812678823182 35.0 33.0 37.0 0.0 37.0 5 32.85183850438509 35.0 33.0 37.0 19.0 37.0 6 34.455961770076534 35.0 33.0 37.0 30.0 37.0 7 35.44014249140242 36.0 35.0 37.0 33.0 37.0 8 35.612938994584454 37.0 35.0 37.0 35.0 37.0 9 37.61174397454911 39.0 37.0 39.0 35.0 39.0 10 37.044599791094775 39.0 37.0 39.0 33.0 39.0 11 36.60872695087244 39.0 35.0 39.0 32.0 39.0 12 35.68416058104054 37.0 35.0 39.0 31.0 39.0 13 35.29027420708233 37.0 35.0 39.0 30.0 39.0 14 36.06635397868881 38.0 35.0 40.0 30.0 41.0 15 36.357174340294016 38.0 35.0 40.0 31.0 41.0 16 36.521138591510805 38.0 35.0 40.0 31.0 41.0 17 36.44144915381774 38.0 35.0 40.0 31.0 41.0 18 36.41141199476799 38.0 35.0 40.0 31.0 41.0 19 36.405010420699746 38.0 35.0 40.0 31.0 41.0 20 36.31249684610277 38.0 35.0 40.0 31.0 41.0 21 36.187985225694 38.0 34.0 40.0 30.0 41.0 22 36.091424838107386 38.0 34.0 40.0 30.0 41.0 23 36.02793470974991 37.0 34.0 40.0 30.0 41.0 24 35.958786545574874 37.0 34.0 40.0 30.0 41.0 25 35.838494560559965 37.0 34.0 40.0 30.0 41.0 26 35.69482466117654 37.0 34.0 40.0 30.0 41.0 27 35.7062313864242 37.0 34.0 40.0 30.0 41.0 28 35.69931491769947 37.0 34.0 40.0 30.0 41.0 29 35.68966722979083 37.0 34.0 40.0 30.0 41.0 30 35.614793597800734 37.0 34.0 40.0 29.0 41.0 31 35.49620304265677 37.0 34.0 40.0 29.0 41.0 32 35.426123334463156 37.0 34.0 40.0 29.0 41.0 33 35.280837746556614 36.0 34.0 40.0 29.0 41.0 34 35.11994857305408 36.0 34.0 40.0 27.0 41.0 35 35.00251686581434 36.0 34.0 40.0 27.0 41.0 36 34.84936138325802 36.0 33.0 40.0 26.0 41.0 37 34.819486328944 36.0 33.0 40.0 27.0 41.0 38 34.772003485028534 36.0 33.0 40.0 27.0 41.0 39 34.67849763295826 36.0 33.0 40.0 26.0 41.0 40 34.55221893695912 36.0 33.0 40.0 25.0 41.0 41 34.49137830556341 35.0 33.0 40.0 25.0 41.0 42 34.441394672336315 35.0 33.0 40.0 26.0 41.0 43 34.37296101939317 35.0 33.0 40.0 26.0 41.0 44 34.29738091442254 35.0 33.0 40.0 26.0 41.0 45 34.20051551985381 35.0 33.0 39.0 25.0 41.0 46 34.136158600058145 35.0 33.0 39.0 25.0 41.0 47 34.05330209132972 35.0 33.0 39.0 25.0 41.0 48 33.928787344934314 35.0 33.0 39.0 24.0 41.0 49 33.86419061730644 35.0 33.0 39.0 24.0 41.0 50 33.73207615082082 35.0 33.0 39.0 24.0 41.0 51 33.64216473681649 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 4.0 12 8.0 13 13.0 14 31.0 15 87.0 16 219.0 17 502.0 18 1204.0 19 2324.0 20 4054.0 21 6504.0 22 9754.0 23 14028.0 24 19332.0 25 25808.0 26 33300.0 27 40808.0 28 49121.0 29 59237.0 30 72542.0 31 89679.0 32 113352.0 33 161433.0 34 234120.0 35 289489.0 36 178216.0 37 225785.0 38 283172.0 39 325005.0 40 160.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.03381603032743 24.621878423234474 30.286032243212478 13.058273303225617 2 28.71933239643048 26.321209417436663 30.993755618402773 13.965702567730082 3 29.41999997320583 26.269452010076392 30.482746116743098 13.827801899974679 4 23.02811646354452 38.38273955217115 25.81180756604875 12.777336418235578 5 24.19803929186578 32.48118937539661 28.54941269409586 14.771358638641749 6 22.97564454495236 40.722987121381614 25.39118373522357 10.910184598442454 7 89.52227332466094 4.060031447425594 4.51687206631736 1.900823161596093 8 91.57586791902624 2.748680052141457 3.732249419794551 1.9432026090377634 9 87.5482574187478 4.19221602532585 5.364059102582824 2.895467453343533 10 56.77483920148011 21.86837542027774 11.106139303789186 10.250646074452964 11 46.851528585138254 21.255235469409318 17.99215198725669 13.901083958195734 12 43.11155351264886 20.734312124407122 20.417337079158465 15.736797283785553 13 24.522338077241344 34.79236526885941 21.947686167017892 18.73761048688135 14 18.499499618852916 35.08598472821556 26.554363363793843 19.860152289137687 15 18.042748313865133 23.151235680190133 41.11561104330697 17.690404962637764 16 21.79728155270436 19.22222772991297 38.84623405690993 20.134256660472747 17 22.381126543065154 20.88538659300056 25.62648121527643 31.10700564865786 18 25.89299390477262 24.140565794650364 28.927969676143316 21.038470624433696 19 32.09834532595779 25.557530881398726 20.69416552456512 21.64995826807836 20 33.0758413481398 24.950821531617347 22.55502071412718 19.41831640611568 21 26.70709013961103 27.38980562168506 25.24077912091004 20.662325117793877 22 26.3216559869566 24.397477239467992 24.83931312249 24.44155365108541 23 25.15874430009829 28.164023198393423 24.16919090087809 22.5080416006302 24 24.21210623174368 23.033430640831725 32.9927794174322 19.761683709992393 25 22.38237693772097 25.373276297474245 28.874738589367272 23.369608175437513 26 20.95375638650235 32.666515726168925 24.01387402184529 22.365853865483437 27 21.406175967146773 30.113567094614236 26.891389380487503 21.588867557751488 28 19.039536139308254 28.09962787361904 32.41652610891027 20.444309878162436 29 20.6240094529836 24.696410876111344 31.952495720747574 22.727083950157486 30 23.247471411735756 27.63314135309671 27.50810188751539 21.61128534765214 31 29.610461873457382 25.632465246843534 22.774331005366427 21.982741874332657 32 32.837998421823315 24.701412454734598 22.29158935431853 20.16899976912356 33 30.093918035737172 25.72267228987006 23.31521600790964 20.868193666483126 34 22.181286682895003 25.042278969299687 27.859507442750903 24.916926905054407 35 23.594857841291873 25.111809843553303 28.279461419296183 23.01387089585865 36 29.177780665594007 26.241407444224585 23.63723728873354 20.943574601447867 37 23.931437288465602 30.30809277749718 25.906882216842547 19.853587717194667 38 23.834710330448047 29.757338588563442 23.383943057027373 23.024008023961134 39 23.741332643829992 29.423661843269283 24.08469994770671 22.750305565194015 40 26.27771354619516 24.126498854772464 24.50809250955547 25.087695089476902 41 19.62722162754048 23.607406444802 26.5030971829055 30.262274744752027 42 22.704219590736898 24.809973505030385 24.161643875991217 28.324163028241507 43 22.682025085596212 26.480500765196872 24.617144786323184 26.22032936288373 44 23.091440021471062 27.455942567587183 25.35376120945316 24.098856201488594 45 20.327174693083933 31.447961477126935 22.263187532850772 25.961676296938364 46 22.64000289377049 30.09119396166558 24.293515855227522 22.97528728933641 47 22.60030286344842 24.410383098594064 28.008750976312612 24.980563061644904 48 23.338616250754143 22.34776779992614 30.13736925002668 24.176246699293035 49 22.76995462407108 23.111044423396134 29.695042140532745 24.423958812000038 50 20.604092452394575 29.08194684661632 25.85418701349042 24.459773687498686 51 19.243484439061792 30.487256468894426 24.34223658985224 25.927022502191537 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 472.0 1 908.0 2 1344.0 3 3921.0 4 6498.0 5 4834.5 6 3171.0 7 3230.5 8 3290.0 9 3427.5 10 3565.0 11 3723.5 12 3882.0 13 3793.0 14 3704.0 15 3708.0 16 3712.0 17 3570.5 18 3429.0 19 3450.5 20 3472.0 21 4186.0 22 4900.0 23 5564.5 24 6229.0 25 8095.5 26 12113.5 27 14265.0 28 18692.5 29 23120.0 30 25414.5 31 27709.0 32 33185.0 33 38661.0 34 46411.5 35 54162.0 36 58871.0 37 63580.0 38 71793.0 39 80006.0 40 107812.5 41 135619.0 42 157389.5 43 179160.0 44 180232.5 45 181305.0 46 172302.5 47 163300.0 48 158039.5 49 152779.0 50 152657.5 51 152536.0 52 141398.0 53 130260.0 54 127424.5 55 124589.0 56 121889.5 57 119190.0 58 119639.0 59 120088.0 60 117987.5 61 115887.0 62 104923.5 63 93960.0 64 81322.0 65 68684.0 66 58742.5 67 48801.0 68 40440.0 69 32079.0 70 28155.0 71 24231.0 72 20187.0 73 16143.0 74 12665.0 75 7652.0 76 6117.0 77 4743.0 78 3369.0 79 2516.0 80 1663.0 81 1283.5 82 904.0 83 546.0 84 188.0 85 130.5 86 73.0 87 51.5 88 30.0 89 19.0 90 8.0 91 6.5 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2239293.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.298446103243514 #Duplication Level Percentage of deduplicated Percentage of total 1 78.89263739153506 14.436126732517382 2 7.86818681896842 2.8795118487428932 3 2.724536055566753 1.4956432850739574 4 1.4472448435717205 1.0592932707317686 5 0.8762184240844656 0.801671780388928 6 0.5884839145105475 0.646100471537821 7 0.443375708348157 0.5679160551887317 8 0.29690399390730193 0.43463053842804034 9 0.25152287250394284 0.41422299536217494 >10 3.4992680751469134 16.17851982122028 >50 1.6398859030903343 21.905335624315143 >100 1.4677453913957748 38.485274780949105 >500 0.002926445405100852 0.3297182818512471 >1k 0.0010641619654912188 0.3660345136925331 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3001 0.13401551293198344 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03393928351493083 0.0 2 0.0 0.0 0.0 0.12320853054959757 0.0 3 0.0 0.0 0.0 0.18090531252498 0.0 4 0.0 0.0 0.0 0.3243434423275561 0.0 5 0.0 0.0 0.0 0.583577048648837 0.0 6 0.0 0.0 0.0 0.8590211285436966 0.0 7 0.0 0.0 0.0 1.0190716444877914 0.0 8 0.0 0.0 0.0 1.394234698183757 0.0 9 0.0 0.0 0.0 1.5117271388782085 0.0 10 0.0 0.0 0.0 1.7093788084006871 0.0 11 0.0 0.0 0.0 1.9989791420774325 0.0 12 0.0 0.0 0.0 2.2444137502327743 0.0 13 0.0 0.0 0.0 2.337166239522921 0.0 14 0.0 0.0 0.0 2.374678079197318 0.0 15 0.0 0.0 0.0 2.4363939868521003 0.0 16 0.0 0.0 0.0 2.569248419032257 0.0 17 0.0 0.0 0.0 2.7102304164752 0.0 18 0.0 0.0 0.0 2.864654156468135 0.0 19 0.0 0.0 0.0 2.9733491776199004 0.0 20 0.0 0.0 0.0 3.085795382739106 0.0 21 0.0 0.0 0.0 3.244550847075394 0.0 22 0.0 0.0 0.0 3.4108979932505483 0.0 23 0.0 0.0 0.0 3.5773344533296894 0.0 24 0.0 0.0 0.0 3.7127789887254594 0.0 25 0.0 0.0 0.0 3.832772218731537 0.0 26 0.0 0.0 0.0 3.9387878227637025 0.0 27 0.0 0.0 0.0 4.063827288345027 0.0 28 4.465695199333004E-5 0.0 0.0 4.182123554175358 0.0 29 4.465695199333004E-5 0.0 0.0 4.313906219507675 0.0 30 4.465695199333004E-5 0.0 0.0 4.481146504722696 0.0 31 8.931390398666008E-5 0.0 0.0 4.6345431348197845 0.0 32 1.3397085597999012E-4 0.0 0.0 4.7675315378559215 0.0 33 1.3397085597999012E-4 0.0 0.0 4.909272703482751 0.0 34 1.3397085597999012E-4 0.0 0.0 5.0655720354594065 0.0 35 1.3397085597999012E-4 0.0 0.0 5.256659133038865 0.0 36 1.3397085597999012E-4 0.0 0.0 5.4133603775834604 0.0 37 1.3397085597999012E-4 0.0 0.0 5.578948355574728 0.0 38 1.3397085597999012E-4 0.0 0.0 5.799151785853839 0.0 39 1.7862780797332016E-4 0.0 0.0 6.205931961561082 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGAAA 20 7.0347195E-4 45.000004 28 CGTAGAC 20 7.0347195E-4 45.000004 14 AATCGGC 20 7.0347195E-4 45.000004 27 ACGCATT 25 3.8919956E-5 45.0 11 GTACTCG 25 3.8919956E-5 45.0 1 ATACGAT 45 3.8562575E-10 45.0 11 TACGTCC 25 3.8919956E-5 45.0 19 TAGACCG 65 0.0 41.53846 1 CGTATTT 430 0.0 41.337208 1 CGTTAGA 55 6.184564E-11 40.90909 26 TACGGGA 415 0.0 40.66265 4 CCCGTTA 50 1.0822987E-9 40.5 19 TATTACG 50 1.0822987E-9 40.5 1 CACGTTA 45 1.9297659E-8 40.0 24 AATACGG 165 0.0 39.545452 2 CGCGATC 40 3.4601726E-7 39.375004 33 ATAGGGC 955 0.0 38.874348 4 TCGATAG 110 0.0 38.863632 1 TCAATCG 35 6.2509444E-6 38.571426 15 AACGCAT 35 6.2509444E-6 38.571426 29 >>END_MODULE