##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545267_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3579702 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.307930660149925 31.0 31.0 33.0 30.0 34.0 2 31.628690041796776 31.0 31.0 34.0 30.0 34.0 3 31.712680552738746 31.0 31.0 34.0 30.0 34.0 4 30.28296601225465 35.0 33.0 37.0 0.0 37.0 5 32.86115352618737 35.0 33.0 37.0 19.0 37.0 6 34.49563203864456 35.0 33.0 37.0 30.0 37.0 7 35.538902120902804 36.0 35.0 37.0 33.0 37.0 8 35.73167459190737 37.0 35.0 37.0 35.0 37.0 9 37.7725003366202 39.0 37.0 39.0 35.0 39.0 10 37.16145841190133 39.0 37.0 39.0 33.0 39.0 11 36.7097632707974 39.0 35.0 39.0 32.0 39.0 12 35.630875419238805 37.0 35.0 39.0 31.0 39.0 13 35.21065775866259 37.0 35.0 39.0 30.0 39.0 14 36.03394863594791 38.0 35.0 40.0 30.0 41.0 15 36.381703281446335 38.0 35.0 40.0 31.0 41.0 16 36.578587826584446 38.0 35.0 40.0 32.0 41.0 17 36.53657120061949 38.0 35.0 40.0 32.0 41.0 18 36.491235583297154 37.0 35.0 40.0 31.0 41.0 19 36.480816559590714 37.0 35.0 40.0 31.0 41.0 20 36.373254533477926 37.0 35.0 40.0 31.0 41.0 21 36.191686347075816 37.0 35.0 40.0 31.0 41.0 22 36.06541578041971 37.0 34.0 40.0 30.0 41.0 23 36.058373015407426 37.0 34.0 40.0 31.0 41.0 24 35.989329000011736 37.0 34.0 40.0 31.0 41.0 25 35.89348442970951 36.0 34.0 40.0 30.0 41.0 26 35.753700168338035 36.0 34.0 40.0 30.0 41.0 27 35.728163685133566 36.0 34.0 40.0 30.0 41.0 28 35.782290257680664 36.0 34.0 40.0 30.0 41.0 29 35.83727081192792 36.0 34.0 40.0 30.0 41.0 30 35.783295927985066 36.0 34.0 40.0 30.0 41.0 31 35.66625043090179 36.0 34.0 40.0 30.0 41.0 32 35.573616742399224 36.0 34.0 40.0 30.0 41.0 33 35.44049141520719 36.0 34.0 40.0 29.0 41.0 34 35.3784669785362 36.0 34.0 40.0 29.0 41.0 35 35.24595064058405 36.0 34.0 40.0 29.0 41.0 36 35.04637872091029 36.0 34.0 40.0 27.0 41.0 37 34.98326201454758 36.0 34.0 40.0 27.0 41.0 38 34.975776195895634 35.0 34.0 40.0 28.0 41.0 39 34.968873945373105 36.0 34.0 40.0 28.0 41.0 40 34.879082951597645 36.0 34.0 40.0 27.0 41.0 41 34.885906983318726 36.0 34.0 40.0 27.0 41.0 42 34.83027022919785 35.0 34.0 40.0 27.0 41.0 43 34.739915221993336 35.0 33.0 40.0 27.0 41.0 44 34.65823775275149 35.0 33.0 40.0 27.0 41.0 45 34.56647452776795 35.0 33.0 40.0 27.0 41.0 46 34.55548925580956 35.0 33.0 40.0 27.0 41.0 47 34.492158844507166 35.0 33.0 40.0 27.0 41.0 48 34.409165343930866 35.0 33.0 39.0 27.0 41.0 49 34.40876503127914 35.0 33.0 39.0 27.0 41.0 50 34.23036107474868 35.0 33.0 39.0 26.0 41.0 51 34.14469835757278 35.0 33.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 1.0 12 2.0 13 6.0 14 12.0 15 56.0 16 200.0 17 553.0 18 1346.0 19 2690.0 20 4915.0 21 8135.0 22 12683.0 23 18432.0 24 26448.0 25 36256.0 26 47409.0 27 58774.0 28 71007.0 29 86761.0 30 108279.0 31 137630.0 32 177198.0 33 260101.0 34 391233.0 35 535064.0 36 255839.0 37 324738.0 38 438424.0 39 575174.0 40 334.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.916064521571908 25.853436962071147 29.574752311784614 12.655746204572335 2 27.63889284638777 26.86262711253618 31.70872882714818 13.789751213927865 3 28.62780197904742 26.01772438040932 31.76116335940813 13.593310281135135 4 22.168074325739966 39.08775087982184 26.527012583729036 12.217162210709159 5 24.31582293721656 32.15862661193585 29.451529764209422 14.07402068663816 6 21.619090080682692 41.15445922593557 26.174189918602163 11.052260774779576 7 90.65480869636635 3.7248631310650997 3.9211364521404293 1.699191720428125 8 92.87122224140445 2.0793630307774222 3.328042390120742 1.7213723376973837 9 89.48786798454172 3.8521362951441205 4.464589510523502 2.1954062097906473 10 56.45609606609712 25.727113597724056 8.716451816380246 9.100338519798576 11 47.91273128321855 19.324876763484784 20.09343235833597 12.668959594960699 12 43.2085966932443 22.038901562197076 21.3231715936131 13.429330150945527 13 20.049825376525757 43.707688517088854 21.41491107360333 14.82757503278206 14 13.809250043718723 44.26293026626239 26.685824685965482 15.241995004053411 15 12.759497857642899 24.652191718752007 48.246418277275595 14.3418921463295 16 15.562831766443127 19.66867633115829 46.20429298304719 18.564198919351387 17 16.70183719203442 20.534949557253647 26.444352071764634 36.3188611789473 18 21.613866182157064 24.289284415294905 32.782421553525964 21.31442784902207 19 30.24162346474651 25.76362501683101 23.5490552006843 20.44569631773818 20 33.77395660309154 24.375213355748606 23.887770546263347 17.963059494896502 21 22.799495600471772 29.49292985840721 26.944756854062152 20.762817687058867 22 23.07949097438837 25.37878851368075 25.233999925133432 26.30772058679745 23 20.644874908581777 31.483598355393827 23.927718005577 23.943808730447394 24 19.94149233651293 24.212462378153266 38.68590178735548 17.16014349797832 25 17.379882459489647 27.362612865540203 34.588912708376284 20.668591966593866 26 16.835507536660874 38.378669509361394 25.11932557514564 19.666497378832094 27 17.558835903100313 35.97662598730285 28.433176839859854 18.03136126973698 28 14.95493200271978 29.644450850936753 39.0017940040819 16.398823142261563 29 15.285182956570129 25.40024281350794 38.15496373720494 21.15961049271699 30 18.33004535014367 32.820692895665616 30.250115791761438 18.599145962429276 31 29.114043571224645 28.366551182193376 23.528075800723077 18.991329445858902 32 31.25176341494348 27.63207663654684 23.806646475041777 17.309513473467902 33 27.959087097194125 28.8644417887299 23.79834969503048 19.378121419045495 34 18.966634652828642 27.77700490152532 27.75817651860406 25.49818392704197 35 20.044098642847924 26.87754455538478 30.9126011047847 22.165755696982597 36 31.547793643158005 25.241542452416432 25.324454381956933 17.88620952246863 37 20.776757394889295 32.60394300978126 28.991128311798022 17.628171283531422 38 19.494024921627553 33.78468375300514 25.286127169244814 21.435164156122493 39 20.42527562350162 32.974504581666295 26.30649143420318 20.2937283606289 40 25.26221456422909 27.059598815767345 24.179694287401578 23.498492332601987 41 17.703847973937496 24.33420435555809 27.14974598444228 30.812201686062135 42 21.977639479487397 26.016942192394787 23.94009333737836 28.065324990739455 43 21.421392060009463 28.094880523574307 25.482679843182478 25.00104757323375 44 19.329011185847314 31.322607300831184 28.543744702771345 20.80463681055015 45 16.81908158835568 38.02908733743758 22.942831554134955 22.20899952007178 46 21.505225853995668 33.999534039425626 25.157904205433862 19.337335901144844 47 20.708343878903886 27.742700370030803 27.593861164979653 23.955094586085657 48 23.04742126579252 23.662779750940164 32.01129591234131 21.278503070926018 49 20.55632005122214 24.26014791175355 32.43566084551172 22.74787119151259 50 18.72762034381633 34.079792116773966 26.931180304952758 20.261407234456946 51 17.77533437140857 35.41372996970139 24.23360938983189 22.57732626905815 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 541.0 1 1192.5 2 1844.0 3 5246.0 4 8648.0 5 6549.5 6 4451.0 7 5016.0 8 5581.0 9 6085.5 10 6590.0 11 6852.5 12 7115.0 13 7102.5 14 7090.0 15 7194.5 16 7299.0 17 7061.5 18 6824.0 19 9022.0 20 11220.0 21 11477.5 22 11735.0 23 14204.0 24 16673.0 25 21406.5 26 31485.5 27 36831.0 28 42285.5 29 47740.0 30 61688.0 31 75636.0 32 84540.5 33 93445.0 34 104430.5 35 115416.0 36 125209.0 37 135002.0 38 157467.5 39 179933.0 40 243896.0 41 307859.0 42 356331.5 43 404804.0 44 393356.0 45 381908.0 46 351346.0 47 320784.0 48 294129.5 49 267475.0 50 251945.5 51 236416.0 52 215479.5 53 194543.0 54 171127.0 55 147711.0 56 132922.5 57 118134.0 58 110818.5 59 103503.0 60 94717.0 61 85931.0 62 76848.5 63 67766.0 64 56007.0 65 44248.0 66 40626.0 67 37004.0 68 29028.0 69 21052.0 70 18301.0 71 15550.0 72 12607.5 73 9665.0 74 7367.5 75 3607.0 76 2144.0 77 1542.5 78 941.0 79 953.0 80 965.0 81 608.5 82 252.0 83 208.5 84 165.0 85 102.0 86 39.0 87 23.5 88 8.0 89 5.5 90 3.0 91 5.0 92 7.0 93 3.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3579702.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.185125987238042 #Duplication Level Percentage of deduplicated Percentage of total 1 77.22666429927762 10.954699626593914 2 10.097861691689804 2.8647888059664908 3 3.7388567737713005 1.591084631525528 4 1.8377180705746017 1.0427304944049895 5 1.0042552653702388 0.7122743731312006 6 0.6409246205463436 0.5454957894463571 7 0.41222445326374896 0.4093219063196619 8 0.28815285285674497 0.3269987617083995 9 0.21759059172918957 0.2777894961584607 >10 1.780955051860038 5.6681105377244725 >50 0.686968872669399 7.141613106681041 >100 2.0280532751180904 64.47466106985065 >500 0.03611925650727079 3.2314732757415134 >1k 0.0036549247656166876 0.7589581247473393 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3970 0.11090308634629363 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.061876659006811184 0.0 2 0.0 0.0 0.0 0.2120567577971574 0.0 3 0.0 0.0 0.0 0.3068691192730568 0.0 4 0.0 0.0 0.0 0.4850124395829597 0.0 5 2.793528623332333E-5 0.0 0.0 0.7971613279541147 0.0 6 2.793528623332333E-5 0.0 0.0 1.1080531284447699 0.0 7 2.793528623332333E-5 0.0 0.0 1.2750223342613436 0.0 8 2.793528623332333E-5 0.0 0.0 1.6561993149150405 0.0 9 2.793528623332333E-5 0.0 0.0 1.767521430554834 0.0 10 2.793528623332333E-5 0.0 0.0 1.9559449361985999 0.0 11 2.793528623332333E-5 0.0 0.0 2.27225618221852 0.0 12 2.793528623332333E-5 0.0 0.0 2.5167458073325655 0.0 13 2.793528623332333E-5 0.0 0.0 2.61630716746813 0.0 14 2.793528623332333E-5 0.0 0.0 2.655360697622316 0.0 15 2.793528623332333E-5 0.0 0.0 2.7175446447776936 0.0 16 2.793528623332333E-5 0.0 0.0 2.8713842660646054 0.0 17 2.793528623332333E-5 0.0 0.0 3.0615956300273037 0.0 18 2.793528623332333E-5 0.0 0.0 3.2784293217703597 0.0 19 2.793528623332333E-5 0.0 0.0 3.4120717311105784 0.0 20 2.793528623332333E-5 0.0 0.0 3.557698378244893 0.0 21 2.793528623332333E-5 0.0 0.0 3.7431328082616933 0.0 22 2.793528623332333E-5 0.0 0.0 3.9309696728945593 0.0 23 2.793528623332333E-5 0.0 0.0 4.146015506318682 0.0 24 2.793528623332333E-5 0.0 0.0 4.298653910297561 0.0 25 2.793528623332333E-5 0.0 0.0 4.42489346878595 0.0 26 2.793528623332333E-5 0.0 0.0 4.553395785459236 0.0 27 2.793528623332333E-5 0.0 0.0 4.676338980172092 0.0 28 2.793528623332333E-5 0.0 0.0 4.810903253958011 0.0 29 5.587057246664666E-5 0.0 0.0 4.9547979133458595 0.0 30 5.587057246664666E-5 0.0 0.0 5.135623021134162 0.0 31 5.587057246664666E-5 0.0 0.0 5.303374414965268 0.0 32 5.587057246664666E-5 0.0 0.0 5.443777163573951 0.0 33 5.587057246664666E-5 0.0 0.0 5.591079927882265 0.0 34 5.587057246664666E-5 0.0 0.0 5.756792045818339 0.0 35 5.587057246664666E-5 0.0 0.0 5.970748403079362 0.0 36 5.587057246664666E-5 0.0 0.0 6.144785236312967 0.0 37 5.587057246664666E-5 0.0 0.0 6.31259250071654 0.0 38 5.587057246664666E-5 0.0 0.0 6.485930951794312 0.0 39 5.587057246664666E-5 0.0 0.0 6.686841530384373 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCTCAT 30 2.166793E-6 45.000004 26 CGTCGGT 30 2.166793E-6 45.000004 21 GACCGTT 35 1.212884E-7 45.0 26 TCTACGA 55 1.8189894E-12 45.0 15 GTTCGAC 20 7.0352876E-4 45.0 42 TACGAGT 25 3.892465E-5 45.0 17 CTACGAC 35 1.212884E-7 45.0 23 CACTACG 20 7.0352876E-4 45.0 38 TACGACA 25 3.892465E-5 45.0 33 TCGCTCA 25 3.892465E-5 45.0 19 ACTACGT 35 1.212884E-7 45.0 21 GATATCG 25 3.892465E-5 45.0 1 CGGTCAT 25 3.892465E-5 45.0 39 ATACCGG 100 0.0 45.0 2 GTACGAT 40 6.8212103E-9 45.0 17 CCCGATA 45 3.8562575E-10 45.0 20 ATCGTTC 65 0.0 44.999996 40 CCGTCGA 65 0.0 44.999996 15 TCGATTG 120 0.0 43.125004 1 GCGTAAG 185 0.0 42.567566 1 >>END_MODULE