SRR1545266_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545266_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1758434
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2181	0.12403081378089824	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	1967	0.1118608944094575	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGAAC	35	1.212411E-7	45.000004	41
CGCTAAA	35	1.212411E-7	45.000004	12
AAACCGT	35	1.212411E-7	45.000004	25
CCGTTGT	35	1.212411E-7	45.000004	23
AGCGTAA	20	7.0343085E-4	45.0	42
CGTATGA	20	7.0343085E-4	45.0	33
CGTATCA	20	7.0343085E-4	45.0	37
ACGCATC	20	7.0343085E-4	45.0	12
CACGCGT	25	3.891653E-5	45.0	28
GTCTAGA	25	3.891653E-5	45.0	33
TAAGTCG	20	7.0343085E-4	45.0	1
TATGATC	20	7.0343085E-4	45.0	10
ATCCGTT	20	7.0343085E-4	45.0	43
CCGTATG	25	3.891653E-5	45.0	1
ACGATAT	20	7.0343085E-4	45.0	18
CCCGTAG	20	7.0343085E-4	45.0	1
TACGATG	25	3.891653E-5	45.0	26
CTACGCG	20	7.0343085E-4	45.0	1
TATTACG	50	2.1827873E-11	45.0	1
CGAATCT	20	7.0343085E-4	45.0	30