##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545265_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2939814 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.229082180029078 31.0 31.0 33.0 30.0 34.0 2 31.55540044370154 31.0 31.0 34.0 30.0 34.0 3 31.653286228312403 31.0 31.0 34.0 30.0 34.0 4 30.29717764457207 35.0 33.0 37.0 0.0 37.0 5 32.848824109280386 35.0 33.0 37.0 19.0 37.0 6 34.44787799500241 35.0 33.0 37.0 30.0 37.0 7 35.473815010065266 36.0 35.0 37.0 33.0 37.0 8 35.65575883372213 37.0 35.0 37.0 35.0 37.0 9 37.674254901840726 39.0 37.0 39.0 35.0 39.0 10 37.10019953643326 39.0 37.0 39.0 33.0 39.0 11 36.65135515376143 39.0 35.0 39.0 32.0 39.0 12 35.58073163812404 37.0 35.0 39.0 31.0 39.0 13 35.13203182242142 37.0 35.0 39.0 30.0 39.0 14 35.87206605587973 38.0 34.0 40.0 29.0 41.0 15 36.21345704184006 38.0 35.0 40.0 30.0 41.0 16 36.407392440474126 38.0 35.0 40.0 31.0 41.0 17 36.351654220301015 38.0 35.0 40.0 31.0 41.0 18 36.30397025117916 37.0 35.0 40.0 31.0 41.0 19 36.30474819155226 37.0 35.0 40.0 31.0 41.0 20 36.19728424995595 37.0 35.0 40.0 31.0 41.0 21 36.034617496208945 37.0 34.0 40.0 30.0 41.0 22 35.94466826812853 37.0 34.0 40.0 30.0 41.0 23 35.905757643170624 37.0 34.0 40.0 30.0 41.0 24 35.824290244212726 37.0 34.0 40.0 30.0 41.0 25 35.69171791140528 36.0 34.0 40.0 30.0 41.0 26 35.52336848521709 36.0 34.0 40.0 30.0 41.0 27 35.5302692619329 36.0 34.0 40.0 30.0 41.0 28 35.53273540434871 36.0 34.0 40.0 29.0 41.0 29 35.57363935269374 36.0 34.0 40.0 30.0 41.0 30 35.504220335028 36.0 34.0 40.0 29.0 41.0 31 35.34246316263546 36.0 34.0 40.0 29.0 41.0 32 35.262627159405326 36.0 34.0 40.0 29.0 41.0 33 35.127715562957384 36.0 34.0 40.0 29.0 41.0 34 35.02028257570037 36.0 34.0 40.0 27.0 41.0 35 34.88532369734956 35.0 33.0 40.0 27.0 41.0 36 34.70901764533402 35.0 33.0 40.0 26.0 41.0 37 34.62765501490911 35.0 33.0 40.0 26.0 41.0 38 34.59164933563824 35.0 33.0 40.0 27.0 41.0 39 34.508595101594864 35.0 33.0 40.0 26.0 41.0 40 34.36282295410526 35.0 33.0 40.0 25.0 41.0 41 34.32085941491537 35.0 33.0 40.0 25.0 41.0 42 34.274820787981824 35.0 33.0 39.0 26.0 41.0 43 34.176858127759104 35.0 33.0 39.0 26.0 41.0 44 34.096467327524806 35.0 33.0 39.0 26.0 41.0 45 34.005300335327334 35.0 33.0 39.0 25.0 41.0 46 33.97385923054996 35.0 33.0 39.0 25.0 41.0 47 33.87180073297154 35.0 33.0 39.0 24.0 41.0 48 33.7627894145684 35.0 33.0 39.0 24.0 41.0 49 33.70540755299485 35.0 33.0 39.0 24.0 40.0 50 33.552127447518785 35.0 32.0 38.0 24.0 40.0 51 33.46034238900828 35.0 32.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 1.0 12 6.0 13 6.0 14 40.0 15 85.0 16 326.0 17 761.0 18 1711.0 19 3274.0 20 5561.0 21 8887.0 22 13086.0 23 18638.0 24 25676.0 25 34806.0 26 44308.0 27 54681.0 28 65551.0 29 78849.0 30 96340.0 31 120268.0 32 151752.0 33 217370.0 34 321150.0 35 417074.0 36 229104.0 37 282957.0 38 351733.0 39 395626.0 40 183.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.52678570821147 25.002330079385978 30.119966773408112 12.35091743899444 2 28.703686695824977 26.804859082921574 30.44076938200852 14.050684839244932 3 29.311956470715494 25.712306969080355 30.776130734801587 14.199605825402559 4 22.355563991463406 38.479645310893815 25.656078921999825 13.508711775642949 5 24.17938685916864 32.06491975342658 28.979180315489344 14.776513071915435 6 22.0822813960339 40.97017702480497 25.8232663699132 11.124275209247932 7 89.92004256051574 3.988007404550084 4.281121186578471 1.8108288483557122 8 91.83955175395451 2.2770828358528803 3.783130497371603 2.100234912821015 9 88.10390725399634 3.703227483099271 5.499225461202648 2.69363980170174 10 59.43413426835848 19.630085440779588 9.966242762297206 10.969537528564732 11 49.88159114828353 20.669606988741464 15.953764421830769 13.495037441144236 12 43.89906980509652 20.81475222582109 19.93721371488128 15.348964254201118 13 23.691975070531672 36.941384727060964 21.660179861719143 17.70646034068822 14 17.443756645828614 38.775480353518965 26.403439129142182 17.37732387151024 15 15.979276239925383 22.639085329888218 44.38063088345045 17.00100754673595 16 20.36190044676296 18.27704065631363 41.63011673527645 19.73094216164696 17 20.89210405828396 19.379185213758422 25.426642637935597 34.30206809002202 18 25.176354694548703 23.70289412867617 30.09309432501512 21.02765685176001 19 32.94014519285914 24.547199244578056 21.664227736856823 20.848427825705983 20 35.30570301386414 24.292217126661754 21.660588050808656 18.741491808665447 21 26.655665970704266 27.43853862863433 25.50620549463333 20.39958990602807 22 26.142844411245065 23.71265665106704 24.029785557861825 26.11471337982607 23 24.442294648573004 28.14586228924687 23.15211098389218 24.259732078287946 24 24.096830615814472 23.359403009850283 33.524910079345155 19.01885629499009 25 22.2542310499916 24.805106717635876 30.81324192618989 22.127420306182636 26 20.568648220601712 34.027731006111274 24.118838810890757 21.28478196239626 27 21.890840713051915 31.139963276588244 26.926193289779558 20.043002720580283 28 18.79408016969781 27.290740162472865 34.517932086859915 19.39724758096941 29 19.698355066000776 25.23142620587561 33.071616095440056 21.998602632683564 30 23.652924980968184 27.69498342412139 27.851013703588052 20.801077891322375 31 31.275311975519536 25.220541163488576 22.939342420983095 20.564804440008793 32 34.25550051805998 24.958109594688644 22.61520626815166 18.17118361909971 33 31.008084184917823 25.880991110321943 22.47220402379198 20.63872068096825 34 22.59462673488867 25.862350475234148 26.720193862604912 24.82282892727227 35 23.52152210990219 25.11516034687909 28.350467070365674 23.012850472853046 36 32.38027984083347 23.650611909460938 23.89977733285167 20.06933091685392 37 23.820894791303125 30.672858895154594 25.442698075456477 20.06354823808581 38 24.23908451351004 30.859129183002732 21.58585543167017 23.315930871817063 39 23.647448444017208 29.150619733085154 24.88878548098621 22.313146341911427 40 27.477282576380684 24.046725405076646 23.76626548482319 24.709726533719483 41 20.401018567841366 22.491116784939454 26.480927024634894 30.62693762258429 42 24.782588286197697 24.064753756530173 23.162791931734457 27.98986602553767 43 23.45743642284852 24.651729667251058 25.35330466485295 26.537529245047477 44 22.267633258430635 28.28468059543903 27.066916478389448 22.380769667740886 45 20.549837506726615 32.57437375289729 22.25620396392425 24.619584776451845 46 23.966176091412585 29.111875785338796 24.834428300565957 22.087519822682662 47 23.10033900103884 24.823271132119242 26.72968425893611 25.346705607905808 48 24.841673656904824 21.629429616975766 29.659461448921597 23.86943527719781 49 23.555401804331837 22.173001421178345 30.112381259494647 24.159215514995168 50 21.119907585990134 30.573328788828135 24.843680586594935 23.463083038586795 51 19.820097461948272 32.46929907810494 22.82678427954966 24.883819180397126 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 665.0 1 1089.5 2 1514.0 3 4973.0 4 8432.0 5 6103.0 6 3774.0 7 4076.5 8 4379.0 9 4783.5 10 5188.0 11 5202.0 12 5216.0 13 5323.0 14 5430.0 15 5232.5 16 5035.0 17 4939.5 18 4844.0 19 4988.5 20 5133.0 21 6371.0 22 7609.0 23 7834.5 24 8060.0 25 8203.0 26 12381.0 27 16416.0 28 20393.0 29 24370.0 30 26526.5 31 28683.0 32 35260.0 33 41837.0 34 51597.0 35 61357.0 36 67255.0 37 73153.0 38 88021.5 39 102890.0 40 148073.0 41 193256.0 42 223645.0 43 254034.0 44 258304.0 45 262574.0 46 247039.5 47 231505.0 48 227688.5 49 223872.0 50 208623.0 51 193374.0 52 181724.5 53 170075.0 54 161812.0 55 153549.0 56 151559.5 57 149570.0 58 150143.5 59 150717.0 60 141164.5 61 131612.0 62 126838.5 63 122065.0 64 106847.5 65 91630.0 66 79764.5 67 67899.0 68 54066.0 69 40233.0 70 36018.5 71 31804.0 72 25720.0 73 19636.0 74 16182.0 75 10767.5 76 8807.0 77 6630.0 78 4453.0 79 3276.5 80 2100.0 81 1620.0 82 1140.0 83 763.5 84 387.0 85 321.0 86 255.0 87 190.5 88 126.0 89 84.0 90 42.0 91 40.0 92 38.0 93 19.0 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2939814.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.113718202360815 #Duplication Level Percentage of deduplicated Percentage of total 1 78.10842219689673 12.586171045118183 2 9.129624715117624 2.9422439990542806 3 3.1562905646333914 1.5257873016981833 4 1.587579451398787 1.0232723161479453 5 0.9174506301724129 0.7391770459588305 6 0.6134526352354712 0.5931001736808014 7 0.4350635287118692 0.4907343771251441 8 0.303102933583467 0.3907292206458299 9 0.25737746846304704 0.37325771986054934 >10 2.406102219384558 9.166756772661394 >50 1.1378872424381923 13.445096473037491 >100 1.9363510329976357 55.28166682955645 >500 0.009451237135481768 0.9705993080069015 >1k 0.0018441438313135155 0.47140741744797504 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4164 0.14164161406129777 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.4015757459485534E-5 0.0 0.0 0.06262300948291287 0.0 2 3.4015757459485534E-5 0.0 0.0 0.21270053139416303 0.0 3 3.4015757459485534E-5 0.0 0.0 0.30525740744142316 0.0 4 3.4015757459485534E-5 0.0 0.0 0.49901116193065276 0.0 5 3.4015757459485534E-5 0.0 0.0 0.8320254274590161 0.0 6 3.4015757459485534E-5 0.0 0.0 1.1959940322755114 0.0 7 3.4015757459485534E-5 0.0 0.0 1.3896457394923625 0.0 8 3.4015757459485534E-5 0.0 0.0 1.8289932628390775 0.0 9 3.4015757459485534E-5 0.0 0.0 1.954783533924255 0.0 10 3.4015757459485534E-5 0.0 0.0 2.166123435020039 0.0 11 3.4015757459485534E-5 0.0 0.0 2.5005663623617003 0.0 12 3.4015757459485534E-5 0.0 0.0 2.743642965167184 0.0 13 6.803151491897107E-5 0.0 0.0 2.8432411030085576 0.0 14 6.803151491897107E-5 0.0 0.0 2.886917335586537 0.0 15 6.803151491897107E-5 0.0 0.0 2.9543365668712376 0.0 16 6.803151491897107E-5 0.0 0.0 3.101012513036539 0.0 17 6.803151491897107E-5 0.0 0.0 3.2641520858122317 0.0 18 6.803151491897107E-5 0.0 0.0 3.4516809566863755 0.0 19 6.803151491897107E-5 0.0 0.0 3.571178312641548 0.0 20 6.803151491897107E-5 0.0 0.0 3.6933288976785605 0.0 21 6.803151491897107E-5 0.0 0.0 3.8637138267931235 0.0 22 6.803151491897107E-5 0.0 0.0 4.035765528023202 0.0 23 6.803151491897107E-5 0.0 0.0 4.2143482546855005 0.0 24 6.803151491897107E-5 0.0 0.0 4.3522481354262545 0.0 25 1.020472723784566E-4 0.0 0.0 4.471065176232238 0.0 26 1.020472723784566E-4 0.0 0.0 4.5852560740237305 0.0 27 1.020472723784566E-4 0.0 0.0 4.706726343911553 0.0 28 1.020472723784566E-4 0.0 0.0 4.832210473179596 0.0 29 1.020472723784566E-4 0.0 0.0 4.971334921188892 0.0 30 1.020472723784566E-4 0.0 0.0 5.136821581229289 0.0 31 1.3606302983794214E-4 0.0 0.0 5.2954710740203295 0.0 32 1.3606302983794214E-4 0.0 0.0 5.43694260929433 0.0 33 1.3606302983794214E-4 0.0 0.0 5.575658868214112 0.0 34 1.3606302983794214E-4 0.0 0.0 5.734682534337207 0.0 35 1.3606302983794214E-4 0.0 0.0 5.917857388256536 0.0 36 1.3606302983794214E-4 0.0 0.0 6.0805207404277954 0.0 37 1.7007878729742766E-4 0.0 0.0 6.25349086710928 0.0 38 2.040945447569132E-4 0.0 0.0 6.440645564651369 0.0 39 2.040945447569132E-4 0.0 0.0 6.734813835161 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCATA 20 7.035081E-4 45.000004 34 CCTTACG 35 1.212793E-7 45.000004 38 CGAACTA 30 2.1666601E-6 45.000004 14 ACCGAAT 30 2.1666601E-6 45.000004 34 CATTACG 30 2.1666601E-6 45.000004 35 CCGTATC 40 6.8212103E-9 45.000004 45 GAACGTA 30 2.1666601E-6 45.000004 14 TCCGTTA 30 2.1666601E-6 45.000004 10 CGTACGT 30 2.1666601E-6 45.000004 33 TCCGTCG 35 1.212793E-7 45.000004 25 CTATTCG 20 7.035081E-4 45.000004 7 CGTAAGA 20 7.035081E-4 45.000004 22 ATACGAT 20 7.035081E-4 45.000004 10 TATCGTA 30 2.1666601E-6 45.000004 1 GTAACGT 40 6.8212103E-9 45.000004 32 ATCGATA 20 7.035081E-4 45.000004 11 TTACGTC 25 3.8922946E-5 45.0 16 TATATCG 95 0.0 42.63158 1 CTATACG 80 0.0 42.187504 1 TATGCGT 70 0.0 41.785717 20 >>END_MODULE