SRR1545264_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545264_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2682001
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2993	0.1115957824027657	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2842	0.10596565773092553	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCCTC	70	0.0	45.000004	27
CTGTCCG	35	1.2127384E-7	45.000004	39
ACGTTAG	55	1.8189894E-12	45.000004	1
ACATTCG	55	1.8189894E-12	45.000004	1
CGCGCGA	35	1.2127384E-7	45.000004	15
TCGCTTA	35	1.2127384E-7	45.000004	33
CTTGCAC	65	0.0	45.000004	24
TGTTACG	140	0.0	45.000004	1
TCCGTCG	35	1.2127384E-7	45.000004	23
ACCTTCG	35	1.2127384E-7	45.000004	22
TCGTTCC	25	3.892202E-5	45.0	28
CGTATTG	45	3.8562575E-10	45.0	37
ACGTTGT	80	0.0	45.0	39
ACGTTAC	20	7.034971E-4	45.0	18
CGCATCG	20	7.034971E-4	45.0	21
CAACCTA	20	7.034971E-4	45.0	38
CACGCGA	25	3.892202E-5	45.0	39
CCGTGAT	40	6.8212103E-9	45.0	20
CTCCACG	25	3.892202E-5	45.0	13
ATCGTTC	25	3.892202E-5	45.0	10