##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545263_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4071574 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.256389543699807 31.0 31.0 33.0 30.0 34.0 2 31.581777956141778 31.0 31.0 34.0 30.0 34.0 3 31.677462819047374 31.0 31.0 34.0 30.0 34.0 4 30.28249861110224 35.0 33.0 37.0 0.0 37.0 5 32.837374440449814 35.0 33.0 37.0 19.0 37.0 6 34.46174305072191 35.0 33.0 37.0 30.0 37.0 7 35.4807008297037 36.0 35.0 37.0 33.0 37.0 8 35.66301165102243 37.0 35.0 37.0 35.0 37.0 9 37.691792903678035 39.0 37.0 39.0 35.0 39.0 10 37.14174346333875 39.0 37.0 39.0 33.0 39.0 11 36.70736845259352 39.0 35.0 39.0 32.0 39.0 12 35.55259317404031 37.0 35.0 39.0 31.0 39.0 13 35.08039249685748 37.0 35.0 39.0 30.0 39.0 14 35.90794690210715 37.0 35.0 40.0 30.0 41.0 15 36.23648446522156 37.0 35.0 40.0 31.0 41.0 16 36.43831550157261 37.0 35.0 40.0 32.0 41.0 17 36.362686273171015 37.0 35.0 40.0 31.0 41.0 18 36.343387102874715 37.0 35.0 40.0 31.0 41.0 19 36.32853068616707 37.0 35.0 40.0 31.0 41.0 20 36.2337835441527 37.0 35.0 40.0 31.0 41.0 21 36.05290828559176 37.0 34.0 40.0 31.0 41.0 22 35.926061763828926 37.0 34.0 40.0 30.0 41.0 23 35.89685094756966 36.0 34.0 40.0 30.0 41.0 24 35.81449778390372 36.0 34.0 40.0 30.0 41.0 25 35.713969339621485 36.0 34.0 40.0 30.0 41.0 26 35.52233951783757 36.0 34.0 40.0 30.0 41.0 27 35.53323751453369 36.0 34.0 40.0 30.0 41.0 28 35.54911392989542 36.0 34.0 40.0 30.0 41.0 29 35.60602533565643 36.0 34.0 40.0 30.0 41.0 30 35.575105352377236 36.0 34.0 40.0 30.0 41.0 31 35.44638584488456 36.0 34.0 40.0 30.0 41.0 32 35.35209773910532 36.0 34.0 40.0 29.0 41.0 33 35.22200529819672 36.0 34.0 40.0 29.0 41.0 34 35.11398613902142 36.0 34.0 40.0 29.0 41.0 35 34.98037294667861 35.0 34.0 40.0 28.0 41.0 36 34.819220281886075 35.0 33.0 40.0 27.0 41.0 37 34.76090868052503 35.0 33.0 40.0 27.0 41.0 38 34.74744042475957 35.0 33.0 40.0 27.0 41.0 39 34.684844485204 35.0 33.0 40.0 27.0 41.0 40 34.53744964478111 35.0 33.0 40.0 26.0 41.0 41 34.50112143362739 35.0 33.0 40.0 26.0 41.0 42 34.45770087931596 35.0 33.0 40.0 26.0 41.0 43 34.37682503130239 35.0 33.0 40.0 27.0 41.0 44 34.31856451583589 35.0 33.0 39.0 26.0 41.0 45 34.22306680414012 35.0 33.0 39.0 26.0 41.0 46 34.15671850738805 35.0 33.0 39.0 26.0 41.0 47 34.075178542745384 35.0 33.0 39.0 26.0 41.0 48 33.99487397257179 35.0 33.0 39.0 26.0 41.0 49 33.95437219119682 35.0 33.0 39.0 26.0 41.0 50 33.825082879495746 35.0 33.0 39.0 25.0 40.0 51 33.72258983872085 35.0 33.0 38.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 3.0 12 3.0 13 5.0 14 16.0 15 87.0 16 304.0 17 820.0 18 1837.0 19 3791.0 20 6503.0 21 10589.0 22 16048.0 23 23895.0 24 32911.0 25 44538.0 26 57935.0 27 71460.0 28 87288.0 29 105942.0 30 130826.0 31 163934.0 32 208987.0 33 304976.0 34 459879.0 35 617554.0 36 295907.0 37 370580.0 38 474304.0 39 580301.0 40 349.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.47898085605223 25.805843145672902 30.660083790691267 12.055092207583602 2 27.678509588675045 28.127868976469543 31.00353818940783 13.190083245447584 3 28.814311123904417 26.355630525197384 30.842519379483218 13.987538971414986 4 22.852292504078275 38.54808975595188 26.05056422896894 12.549053511000904 5 24.126517165106172 33.4695132644034 28.447647027906157 13.956322542584267 6 21.76349981604166 41.902099777629 25.498050631033603 10.836349775295744 7 90.04694498982457 4.086773321570479 4.142280110836743 1.7240015777682045 8 91.67606925478943 2.631734066481415 3.5041730790107217 2.1880235997184383 9 88.55096333752009 4.409375833522859 4.722964632351027 2.31669619660603 10 59.92137193134646 21.95848583373408 8.737284401560675 9.382857833358795 11 52.461824346063715 19.796275347077078 15.103471040929135 12.638429265930078 12 48.88866074888974 19.873125233632006 17.58597535007346 13.652238667404792 13 23.225244094789876 40.94291298647648 18.30803026053315 17.523812658200487 14 14.655929132075213 43.430967974547436 23.566291561936488 18.34681133144086 15 15.174180795928061 23.23855590000329 46.94695466667191 14.64030863739674 16 17.85535520169841 17.21022385937232 46.02912780168063 18.90529313724864 17 17.312125482675743 19.51957645863737 25.79194188783011 37.37635617085677 18 23.046418903352855 24.968844972484845 29.561958102689523 22.422778021472777 19 33.691442179363555 26.1528096996395 20.14896450365387 20.00678361734307 20 37.572815820122635 24.05890203641147 20.372686337028384 17.99559580643751 21 26.39753078293554 28.61311129307732 22.736931712404097 22.25242621158304 22 23.762284561204094 26.935946638818304 22.004070170405843 27.29769862957176 23 24.149849665018984 30.74221419038436 21.617438366587464 23.490497778009193 24 24.24762511991677 22.759895804423547 34.243292643090854 18.74918643256883 25 20.725129888342934 24.59238122652321 31.68666466580246 22.995824219331393 26 19.49113536926997 37.73560298793538 22.82237778313743 19.950883859657225 27 21.388583383232135 34.08750522525195 25.654181896239635 18.869729495276275 28 17.863067206932747 30.386454968029565 34.72585786234021 17.024619962697475 29 18.688423690690627 26.23331910460181 34.1764388907091 20.90181831399847 30 22.226072766944675 30.555898038449016 26.297716804361166 20.92031239024515 31 31.16802003353003 28.057282024101738 19.59844030834267 21.176257634025564 32 34.322623142794406 28.438289467414812 20.16910413515756 17.069983254633218 33 30.797622737545726 29.34575179033956 20.011646601535425 19.84497887057929 34 20.94627286646393 28.82737732385559 25.098180703580482 25.1281691061 35 22.283225111467946 24.772459004797653 27.810424175024206 25.133891708710195 36 30.489216209750825 27.439928636935 22.199154430203162 19.87170072311101 37 22.981480872016572 33.787572079004335 24.538102463568144 18.69284458541095 38 22.85199777776359 32.895239040233584 20.14781015892134 24.104953023081492 39 23.903704071201947 31.05491881026846 23.593946714464725 21.447430404064864 40 27.577934233787722 24.79448979682059 23.40554291780034 24.22203305159135 41 17.825833449177146 24.38720259044782 26.346715054178066 31.440248906196967 42 24.12823640194185 26.729441734326826 20.6316034044819 28.510718459249418 43 23.0248793218544 27.60826648367437 22.322104424480557 27.044749769990673 44 21.69119362683817 30.832842532150956 25.167023858586386 22.308939982424487 45 20.02235499096909 34.689287238792666 19.733031992050247 25.555325778187992 46 22.15671384088807 33.55562246934478 22.055819199159835 22.23184449060732 47 22.53786864735849 26.90622840208725 25.126793716631457 25.4291092339228 48 24.65388078418813 21.03446971613435 29.518707016009042 24.79294248366848 49 20.812884648541328 24.367922577361973 29.76114397036625 25.058048803730447 50 19.321495814640727 32.3459674317598 24.660413884163717 23.672122869435754 51 18.199742900411486 34.58190861814129 21.613877090284987 25.604471391162235 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 802.0 1 1568.5 2 2335.0 3 6203.0 4 10071.0 5 7527.5 6 4984.0 7 5414.0 8 5844.0 9 6419.5 10 6995.0 11 7308.5 12 7622.0 13 7544.5 14 7467.0 15 7397.5 16 7328.0 17 7181.0 18 7034.0 19 6729.5 20 6425.0 21 7218.5 22 8012.0 23 8493.0 24 8974.0 25 12771.0 26 21581.5 27 26595.0 28 33823.0 29 41051.0 30 47837.0 31 54623.0 32 59079.5 33 63536.0 34 71863.0 35 80190.0 36 83480.5 37 86771.0 38 121594.0 39 156417.0 40 222450.5 41 288484.0 42 353297.0 43 418110.0 44 403753.0 45 389396.0 46 360163.5 47 330931.0 48 311658.5 49 292386.0 50 275038.5 51 257691.0 52 240062.0 53 222433.0 54 208944.0 55 195455.0 56 193247.5 57 191040.0 58 201304.0 59 211568.0 60 213070.5 61 214573.0 62 187155.0 63 159737.0 64 131251.5 65 102766.0 66 84542.5 67 66319.0 68 55610.0 69 44901.0 70 38521.0 71 32141.0 72 26087.5 73 20034.0 74 15698.5 75 8659.5 76 5956.0 77 4880.0 78 3804.0 79 2912.0 80 2020.0 81 1269.5 82 519.0 83 334.5 84 150.0 85 140.5 86 131.0 87 72.5 88 14.0 89 9.5 90 5.0 91 3.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4071574.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.851586100527168 #Duplication Level Percentage of deduplicated Percentage of total 1 77.2219718172313 10.69646791478862 2 10.005426131009562 2.7718204305228675 3 3.5295623502794795 1.4667011037622575 4 1.8544675468275769 1.0274926758206233 5 1.0652028441146237 0.7377374454890068 6 0.691364255523016 0.5745894907322353 7 0.47103961678728107 0.45672520660818433 8 0.33560147816393027 0.3718890216201495 9 0.2512106285248087 0.31316990853410404 >10 1.808812008969993 5.549862347713282 >50 0.7156667270487203 7.3291815840773475 >100 1.9876278825011469 62.16433262014272 >500 0.0544847698694502 4.731622866269668 >1k 0.007368047170957678 1.6588101711342964 >5k 1.9389597818309678E-4 0.14959721278464505 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 5570 0.13680213106773942 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4828 0.11857822060952349 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07977258917558665 0.0 2 0.0 0.0 0.0 0.2502963227488927 0.0 3 0.0 0.0 0.0 0.3474577644910789 0.0 4 0.0 0.0 0.0 0.5945612188308502 0.0 5 0.0 0.0 0.0 0.9388261149128077 0.0 6 0.0 0.0 0.0 1.351492076528635 0.0 7 0.0 0.0 0.0 1.5400677968765888 0.0 8 0.0 0.0 0.0 1.989697350459552 0.0 9 0.0 0.0 0.0 2.116380544722999 0.0 10 0.0 0.0 0.0 2.328387007088659 0.0 11 0.0 0.0 0.0 2.675746529474842 0.0 12 0.0 0.0 0.0 2.9342215074563303 0.0 13 0.0 0.0 0.0 3.0480349859783957 0.0 14 0.0 0.0 0.0 3.0936193226501594 0.0 15 4.912105244802133E-5 0.0 0.0 3.1635431408099177 0.0 16 4.912105244802133E-5 0.0 0.0 3.3240707402100513 0.0 17 7.368157867203199E-5 0.0 0.0 3.4946435948358054 0.0 18 7.368157867203199E-5 0.0 0.0 3.6951311704024046 2.4560526224010664E-5 19 7.368157867203199E-5 0.0 0.0 3.818965343623866 2.4560526224010664E-5 20 7.368157867203199E-5 0.0 0.0 3.93803477475787 2.4560526224010664E-5 21 1.7192368356807466E-4 0.0 0.0 4.107330482019975 2.4560526224010664E-5 22 1.7192368356807466E-4 0.0 0.0 4.292639652380136 2.4560526224010664E-5 23 1.7192368356807466E-4 0.0 0.0 4.484162635874971 2.4560526224010664E-5 24 1.964842097920853E-4 0.0 0.0 4.6286522116508255 2.4560526224010664E-5 25 1.964842097920853E-4 0.0 0.0 4.746272571737613 2.4560526224010664E-5 26 1.964842097920853E-4 0.0 0.0 4.856009002906493 2.4560526224010664E-5 27 1.964842097920853E-4 0.0 0.0 4.957296613054313 2.4560526224010664E-5 28 1.964842097920853E-4 0.0 0.0 5.07877297575827 2.4560526224010664E-5 29 1.964842097920853E-4 0.0 0.0 5.197572241103809 2.4560526224010664E-5 30 1.964842097920853E-4 0.0 0.0 5.349356293168195 2.4560526224010664E-5 31 1.964842097920853E-4 0.0 0.0 5.505438437321783 2.4560526224010664E-5 32 1.964842097920853E-4 0.0 0.0 5.6450159078528355 2.4560526224010664E-5 33 1.964842097920853E-4 0.0 0.0 5.78031984682091 2.4560526224010664E-5 34 1.964842097920853E-4 0.0 0.0 5.926111130486637 2.4560526224010664E-5 35 2.21044736016096E-4 0.0 0.0 6.098182177212056 2.4560526224010664E-5 36 2.21044736016096E-4 0.0 0.0 6.275828463390325 2.4560526224010664E-5 37 2.4560526224010667E-4 0.0 0.0 6.448660886428688 2.4560526224010664E-5 38 2.4560526224010667E-4 0.0 0.0 6.6090165621452535 2.4560526224010664E-5 39 2.4560526224010667E-4 0.0 0.0 6.775414127312926 2.4560526224010664E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATTA 80 0.0 45.0 35 CGACGAA 50 2.1827873E-11 45.0 34 TACGAAC 25 3.8925595E-5 45.0 11 CGTAATC 20 7.0354046E-4 45.0 26 CGTGTAA 20 7.0354046E-4 45.0 41 TTACGTA 40 6.8230293E-9 45.0 17 ATACGAT 55 1.8189894E-12 45.0 22 GCGTATT 25 3.8925595E-5 45.0 44 TAGTCCG 25 3.8925595E-5 45.0 1 GCGTAAT 20 7.0354046E-4 45.0 44 TAATCGC 20 7.0354046E-4 45.0 26 TCTACGT 30 2.1668675E-6 44.999996 16 CGAATCG 30 2.1668675E-6 44.999996 15 TTAACGA 60 0.0 44.999996 42 CGGTCGA 30 2.1668675E-6 44.999996 31 CGGTCTA 145 0.0 43.44828 31 CGTTAGG 590 0.0 42.711864 2 CGGGTAT 450 0.0 42.5 6 ATACCCG 85 0.0 42.35294 29 ACGGGTA 330 0.0 42.272728 5 >>END_MODULE