SRR1545262_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545262_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2222479
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2743	0.12342073873363932	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2472	0.11122714770308291	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCATAG	90	0.0	45.000004	1
AACCGGC	25	3.891985E-5	45.000004	31
CCTTACG	25	3.891985E-5	45.000004	12
GTCGCGA	25	3.891985E-5	45.000004	17
TCCGCTA	25	3.891985E-5	45.000004	30
CACGGTC	45	3.8562575E-10	45.000004	32
GACCGGC	30	2.16642E-6	45.000004	10
TCTTAAC	25	3.891985E-5	45.000004	21
CGACCGT	30	2.16642E-6	45.000004	42
ATCGTTC	45	3.8562575E-10	45.000004	27
ATCCGTT	30	2.16642E-6	45.000004	37
CCCGTAC	25	3.891985E-5	45.000004	16
CGGATTA	25	3.891985E-5	45.000004	20
TACGAAC	25	3.891985E-5	45.000004	10
GTACTAC	25	3.891985E-5	45.000004	19
CGTACGT	25	3.891985E-5	45.000004	29
TCCCGTA	25	3.891985E-5	45.000004	15
ACGTCGT	25	3.891985E-5	45.000004	16
CCGAATC	60	0.0	45.000004	22
ACGTAGC	25	3.891985E-5	45.000004	31