##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545261_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2556745 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.32527882131382 31.0 31.0 33.0 30.0 34.0 2 31.6354622772314 31.0 31.0 34.0 30.0 34.0 3 31.71504197720148 31.0 31.0 34.0 30.0 34.0 4 30.25963285349145 35.0 33.0 37.0 0.0 37.0 5 32.83819191980428 35.0 33.0 37.0 19.0 37.0 6 34.45731428046207 35.0 33.0 37.0 30.0 37.0 7 35.514158823034755 36.0 35.0 37.0 33.0 37.0 8 35.72691957938707 37.0 35.0 37.0 35.0 37.0 9 37.78786895056019 39.0 37.0 39.0 35.0 39.0 10 37.24559977627804 39.0 37.0 39.0 34.0 39.0 11 36.71027928088253 39.0 35.0 39.0 32.0 39.0 12 35.16862651535448 35.0 35.0 39.0 31.0 39.0 13 34.532714838593606 35.0 33.0 39.0 27.0 39.0 14 35.1959166831264 35.0 33.0 40.0 27.0 41.0 15 35.67583939735875 35.0 34.0 40.0 30.0 41.0 16 35.9958044310246 35.0 34.0 40.0 32.0 41.0 17 35.96490303100231 35.0 34.0 40.0 31.0 41.0 18 35.958440908264215 36.0 35.0 40.0 31.0 41.0 19 35.9257215717641 36.0 35.0 40.0 31.0 41.0 20 35.757895683769796 35.0 34.0 40.0 31.0 41.0 21 35.596629307967746 35.0 34.0 40.0 31.0 41.0 22 35.43721685189567 35.0 34.0 40.0 30.0 41.0 23 35.44195568975397 35.0 34.0 40.0 30.0 41.0 24 35.36172829124531 35.0 34.0 40.0 30.0 41.0 25 35.28706617202732 35.0 34.0 40.0 30.0 41.0 26 35.08779405063861 35.0 34.0 40.0 29.0 41.0 27 35.05140207568608 35.0 34.0 40.0 29.0 41.0 28 35.17594871604325 35.0 34.0 40.0 29.0 41.0 29 35.30281705840825 36.0 34.0 40.0 30.0 41.0 30 35.30769670029667 36.0 34.0 40.0 30.0 41.0 31 35.12148024147891 35.0 34.0 40.0 30.0 41.0 32 34.962984184969564 35.0 34.0 40.0 29.0 41.0 33 34.81053487930944 35.0 34.0 40.0 29.0 41.0 34 34.742542177651664 35.0 34.0 40.0 29.0 41.0 35 34.621682647272216 35.0 34.0 40.0 28.0 41.0 36 34.380243630084344 35.0 33.0 39.0 27.0 41.0 37 34.29778135871978 35.0 33.0 39.0 27.0 41.0 38 34.36336044462784 35.0 33.0 39.0 27.0 41.0 39 34.3488744477842 35.0 33.0 39.0 27.0 41.0 40 34.192822905686725 35.0 33.0 39.0 26.0 41.0 41 34.23931052959916 35.0 33.0 39.0 26.0 41.0 42 34.20685676514474 35.0 33.0 39.0 27.0 41.0 43 34.12536682383265 35.0 33.0 39.0 27.0 41.0 44 34.08860210932259 35.0 33.0 39.0 27.0 41.0 45 34.01760871733396 35.0 33.0 39.0 27.0 41.0 46 33.96438714068083 35.0 33.0 38.0 26.0 41.0 47 33.91016546429151 35.0 33.0 38.0 26.0 41.0 48 33.89902708326407 35.0 33.0 38.0 26.0 40.0 49 33.92880557114613 35.0 33.0 38.0 26.0 40.0 50 33.73079599256086 35.0 33.0 38.0 26.0 40.0 51 33.65911422531383 35.0 33.0 38.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 1.0 13 3.0 14 15.0 15 37.0 16 164.0 17 481.0 18 1139.0 19 2412.0 20 4410.0 21 7216.0 22 11388.0 23 16756.0 24 22913.0 25 30425.0 26 38786.0 27 47058.0 28 54959.0 29 67372.0 30 82772.0 31 105200.0 32 137140.0 33 208941.0 34 330783.0 35 476204.0 36 150306.0 37 179695.0 38 247913.0 39 331976.0 40 278.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.870831858476304 25.5215127046303 32.3680304449603 12.239624991933102 2 26.978325957418512 27.261420282429416 32.36951670972271 13.390737050429355 3 27.793933301913178 26.64677157870652 31.014317032007494 14.544978087372812 4 21.329659391139906 38.607057019765364 27.215971870483756 12.847311718610968 5 23.91869349504937 32.05697087507749 29.640656381453763 14.383679248419377 6 21.20888082307778 41.376672292309166 27.120420691152226 10.294026193460827 7 89.35529354706864 4.174409258647225 4.956028074759118 1.514269119525021 8 92.36806955719088 2.6299846093372627 3.203721919862951 1.798223913608905 9 90.0692873164903 3.2481143015826768 4.369383728138708 2.313214653788313 10 67.34472933358626 17.862047251485777 7.574552800533491 7.218670614394475 11 61.52166133110655 15.472407299124471 14.268024382564551 8.737906987204434 12 56.02572802528215 20.14690553809629 14.635914023494717 9.191452413126846 13 20.81060097897913 52.75578909903022 14.57372557685651 11.859884345134144 14 10.798808641456228 52.86448198784001 22.538892224292997 13.797817146410768 15 9.195128962802313 23.427991450066393 56.353332068704546 11.02354751842675 16 10.250376944122312 14.693643675845655 56.04348497797004 19.012494402061996 17 11.864656037266133 17.115277432829636 26.26116409731905 44.75890243258518 18 19.950366579381203 24.3001159677637 33.45284727260638 22.296670180248714 19 33.37732155533696 25.79021372878406 20.06476985385715 20.76769486202183 20 37.769116591603776 22.554810902143156 20.618716375704267 19.057356130548804 21 21.368302274962893 31.628848399038624 23.779688627532273 23.223160698466213 22 21.415706298438053 27.594656487056785 21.41465026821212 29.57498694629304 23 20.149408720854055 34.79549192430219 20.82616764675398 24.228931708089778 24 20.33894659029352 22.596348091029807 41.508597846089465 15.556107472587216 25 14.702326591036648 26.75910190496119 36.477435176366825 22.06113632763533 26 14.61365916428897 41.94990114383718 24.161580447013684 19.274859244860167 27 16.166180045331075 39.107106887859366 27.84294092684253 16.88377213996703 28 11.361477190724925 30.615215831066457 42.95223027716882 15.071076701039798 29 12.281787976509193 25.391933884685407 41.60880338086122 20.71747475794418 30 17.962800357485786 32.146342321975794 31.04576326540191 18.84509405513651 31 32.813284077997615 27.232672792945717 21.054504848938787 18.899538280117884 32 36.76592698919916 26.478901885013954 21.79517315962288 14.95999796616401 33 31.66991624115819 28.296369016073168 21.27204707548074 18.7616676672879 34 18.303233212541727 27.065780905017906 28.05520300225482 26.57578288018555 35 19.820005514824512 24.55352410975674 31.914289457884927 23.712180917533818 36 32.93382797267619 24.235971909595992 24.221187486432946 18.60901263129487 37 19.861855601555884 34.980962121760285 28.72413948203673 16.4330427946471 38 19.31424526106436 35.545860068172615 22.655407559220805 22.484487111542215 39 20.41677992916775 35.1986607972246 24.455821757742754 19.928737515864896 40 26.1357702860473 25.51044394337331 22.53388585877747 25.81989991180192 41 14.692509421158542 22.830904137878434 27.024556613975975 35.452029826987044 42 22.312979980404773 25.64350375184072 20.437822309225208 31.6056939585293 43 21.866865878294472 28.903273498139235 22.595644070879185 26.634216552687107 44 19.227924568152083 33.69757249940843 26.720967480135876 20.35353545230361 45 15.683535119849653 41.620224152193515 18.5742418583003 24.121998869656537 46 20.889607684771068 36.817594245808635 22.984184969560907 19.308613099859393 47 20.635143512552094 26.57030716790294 27.388104797310643 25.406444522234324 48 23.864288382298586 19.64806814915058 33.23025956831831 23.257383900232522 49 18.53325224064191 22.854136802848934 33.45765807696896 25.1549528795402 50 16.68594247764247 36.71277346782726 25.6144433645123 20.98684069001797 51 14.848919231288221 38.65825492960776 21.704941243651596 24.787884595452418 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 408.0 1 596.5 2 785.0 3 2765.5 4 4746.0 5 3673.0 6 2600.0 7 3052.0 8 3504.0 9 4147.0 10 4790.0 11 4936.0 12 5082.0 13 5041.0 14 5000.0 15 4795.5 16 4591.0 17 4268.5 18 3946.0 19 4633.5 20 5321.0 21 5304.0 22 5287.0 23 5652.5 24 6018.0 25 7668.5 26 12084.5 27 14850.0 28 17484.5 29 20119.0 30 26904.5 31 33690.0 32 40080.0 33 46470.0 34 55729.5 35 64989.0 36 65843.5 37 66698.0 38 94841.5 39 122985.0 40 183084.5 41 243184.0 42 288164.5 43 333145.0 44 321477.0 45 309809.0 46 283503.0 47 257197.0 48 233781.5 49 210366.0 50 198055.5 51 185745.0 52 166539.0 53 147333.0 54 123859.0 55 100385.0 56 91242.0 57 82099.0 58 78951.0 59 75803.0 60 75591.5 61 75380.0 62 63641.0 63 51902.0 64 39650.5 65 27399.0 66 19162.0 67 10925.0 68 8199.0 69 5473.0 70 4579.0 71 3685.0 72 2853.5 73 2022.0 74 1739.5 75 1036.0 76 615.0 77 737.0 78 859.0 79 745.5 80 632.0 81 365.0 82 98.0 83 56.5 84 15.0 85 17.0 86 19.0 87 9.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2556745.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.066632294664313 #Duplication Level Percentage of deduplicated Percentage of total 1 77.68664562065291 10.927894781516184 2 10.148402769192527 2.8550770026476866 3 3.611565784064572 1.5240770367728207 4 1.759086274253669 0.9897767917806953 5 0.9915900854876595 0.6974166559794829 6 0.6110470621942974 0.5157224603173235 7 0.41204902822409817 0.4057299517181502 8 0.26738297347230605 0.3008942375751129 9 0.19264417738167483 0.24388693262424968 >10 1.6006719055677223 5.072245549903853 >50 0.6390870514174067 6.668010108741823 >100 2.023321718311592 64.0592708929216 >500 0.05046217547161214 4.399816142340754 >1k 0.005741205592578627 1.0987107654436268 >5k 3.021687153988751E-4 0.2414706897166329 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 5681 0.22219658198216874 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06520008839364114 0.0 2 0.0 0.0 0.0 0.22861098779893968 0.0 3 0.0 0.0 0.0 0.3319846132484859 0.0 4 3.911223059006667E-5 0.0 0.0 0.5824593379472728 0.0 5 3.911223059006667E-5 0.0 0.0 0.9839854971848973 0.0 6 3.911223059006667E-5 0.0 0.0 1.3695147541111843 0.0 7 3.911223059006667E-5 0.0 0.0 1.577630933080929 0.0 8 3.911223059006667E-5 0.0 0.0 2.0555432786609535 0.0 9 3.911223059006667E-5 0.0 0.0 2.190284913043733 0.0 10 3.911223059006667E-5 0.0 0.0 2.4513981644630185 0.0 11 3.911223059006667E-5 0.0 0.0 2.7776723920453543 0.0 12 3.911223059006667E-5 0.0 0.0 3.1122775247433747 0.0 13 1.173366917702E-4 0.0 0.0 3.222104668240282 0.0 14 1.173366917702E-4 0.0 0.0 3.2651672341199456 0.0 15 1.173366917702E-4 0.0 0.0 3.3361559326409167 0.0 16 1.173366917702E-4 0.0 0.0 3.4928786406153134 0.0 17 1.173366917702E-4 0.0 0.0 3.6616870278420413 0.0 18 1.173366917702E-4 0.0 0.0 3.8623718829996734 0.0 19 1.173366917702E-4 0.0 0.0 4.00110296490264 0.0 20 1.173366917702E-4 0.0 0.0 4.114450209152653 0.0 21 1.173366917702E-4 0.0 0.0 4.296009183551742 0.0 22 1.5644892236026667E-4 0.0 0.0 4.474947638501297 0.0 23 1.5644892236026667E-4 0.0 0.0 4.683454939776943 0.0 24 1.5644892236026667E-4 0.0 0.0 4.818313910851493 0.0 25 1.9556115295033333E-4 0.0 0.0 4.929588206880233 0.0 26 1.9556115295033333E-4 0.0 0.0 5.032375148870928 0.0 27 1.9556115295033333E-4 0.0 0.0 5.134027836174511 0.0 28 1.9556115295033333E-4 0.0 0.0 5.244598112052629 0.0 29 1.9556115295033333E-4 0.0 0.0 5.367566965027799 0.0 30 1.9556115295033333E-4 0.0 0.0 5.536336240023937 0.0 31 1.9556115295033333E-4 0.0 0.0 5.699043119278614 0.0 32 1.9556115295033333E-4 0.0 0.0 5.832337601129561 0.0 33 1.9556115295033333E-4 0.0 0.0 5.962385767841533 0.0 34 2.7378561413046666E-4 0.0 0.0 6.11339809014978 0.0 35 2.7378561413046666E-4 0.0 0.0 6.337198273586142 0.0 36 3.1289784472053335E-4 0.0 0.0 6.495837480859453 0.0 37 3.1289784472053335E-4 0.0 0.0 6.659639502570651 0.0 38 3.1289784472053335E-4 0.0 0.0 6.804354755753898 0.0 39 3.1289784472053335E-4 0.0 0.0 6.966787849394445 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTCAAG 30 2.1665492E-6 45.000004 1 CGACGTG 30 2.1665492E-6 45.000004 13 GCGAATC 30 2.1665492E-6 45.000004 26 ACGCACC 30 2.1665492E-6 45.000004 45 TGGACGC 30 2.1665492E-6 45.000004 28 ATTACGC 30 2.1665492E-6 45.000004 38 ATTACCG 65 0.0 45.000004 1 CCGTGGC 70 0.0 45.000004 16 AAGCGTG 30 2.1665492E-6 45.000004 3 TAGCCCG 35 1.212702E-7 45.000004 30 ATCGTTC 30 2.1665492E-6 45.000004 20 TCGGAAT 30 2.1665492E-6 45.000004 12 CTTATCG 30 2.1665492E-6 45.000004 22 CGGTGCC 30 2.1665492E-6 45.000004 21 GAACGAT 35 1.212702E-7 45.000004 18 CCGACAT 35 1.212702E-7 45.000004 41 CATCGTA 35 1.212702E-7 45.000004 26 TATAGCG 65 0.0 45.000004 1 TTACGCC 35 1.212702E-7 45.000004 34 ACGTATA 65 0.0 45.000004 27 >>END_MODULE