##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545260_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 791844 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.346811998322902 31.0 31.0 34.0 30.0 34.0 2 31.602578285621917 31.0 31.0 34.0 30.0 34.0 3 31.684835649446104 31.0 31.0 34.0 30.0 34.0 4 35.425550992367185 37.0 35.0 37.0 33.0 37.0 5 35.284342623041915 37.0 35.0 37.0 33.0 37.0 6 35.28110461151439 37.0 35.0 37.0 32.0 37.0 7 35.900109112400926 37.0 35.0 37.0 35.0 37.0 8 35.99031248579266 37.0 35.0 37.0 35.0 37.0 9 37.658804006849834 39.0 37.0 39.0 35.0 39.0 10 36.89957491627138 39.0 37.0 39.0 32.0 39.0 11 36.52517541333899 39.0 35.0 39.0 32.0 39.0 12 35.52706467435505 37.0 35.0 39.0 31.0 39.0 13 35.03903167795677 37.0 34.0 39.0 30.0 39.0 14 35.80882724375003 38.0 34.0 40.0 29.0 41.0 15 36.26933587928936 38.0 35.0 40.0 31.0 41.0 16 36.239484039785616 38.0 35.0 40.0 31.0 41.0 17 36.336813816862914 37.0 35.0 40.0 31.0 41.0 18 36.41303211238577 37.0 35.0 40.0 31.0 41.0 19 36.33956688438632 37.0 35.0 40.0 31.0 41.0 20 36.214880708826485 37.0 35.0 40.0 31.0 41.0 21 36.060677355640756 37.0 34.0 40.0 31.0 41.0 22 35.95189835371614 36.0 34.0 40.0 30.0 41.0 23 35.902152444168294 36.0 34.0 40.0 30.0 41.0 24 35.70772399614065 36.0 34.0 40.0 30.0 41.0 25 35.68967877511227 36.0 34.0 40.0 30.0 41.0 26 35.50942988770515 35.0 34.0 40.0 30.0 41.0 27 35.472705482392996 36.0 34.0 40.0 30.0 41.0 28 35.536699147811944 36.0 34.0 40.0 30.0 41.0 29 35.54600401089103 36.0 34.0 40.0 30.0 41.0 30 35.47871929319411 36.0 34.0 40.0 30.0 41.0 31 35.36251332333136 36.0 34.0 40.0 29.0 41.0 32 35.21678891296771 35.0 34.0 40.0 29.0 41.0 33 35.0519294204414 35.0 34.0 40.0 29.0 41.0 34 34.91463217502437 35.0 34.0 40.0 27.0 41.0 35 34.7510115628836 35.0 34.0 40.0 27.0 41.0 36 34.5290473881219 35.0 33.0 40.0 25.0 41.0 37 34.34199413015695 35.0 33.0 40.0 25.0 41.0 38 34.41796111355267 35.0 33.0 40.0 26.0 41.0 39 34.40996711473472 35.0 33.0 40.0 26.0 41.0 40 34.1903645162431 35.0 33.0 40.0 24.0 41.0 41 34.20786291239183 35.0 33.0 40.0 24.0 41.0 42 34.15839357247135 35.0 33.0 40.0 25.0 41.0 43 34.058957319876136 35.0 33.0 39.0 24.0 41.0 44 34.01239764398038 35.0 33.0 39.0 24.0 41.0 45 33.9386116457282 35.0 33.0 39.0 24.0 41.0 46 33.869681401892294 35.0 33.0 39.0 24.0 41.0 47 33.90614944357727 35.0 33.0 39.0 24.0 41.0 48 33.873466238299464 35.0 33.0 39.0 24.0 41.0 49 33.84606058769152 35.0 33.0 39.0 24.0 41.0 50 33.62996625597971 35.0 33.0 39.0 24.0 41.0 51 33.458195048519656 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 0.0 13 3.0 14 6.0 15 21.0 16 71.0 17 169.0 18 370.0 19 771.0 20 1316.0 21 2172.0 22 3385.0 23 4813.0 24 6842.0 25 9594.0 26 12524.0 27 15093.0 28 17194.0 29 19701.0 30 24104.0 31 30068.0 32 38104.0 33 50560.0 34 87030.0 35 127056.0 36 55926.0 37 66382.0 38 89397.0 39 129077.0 40 93.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.831901233071157 24.729239597698538 29.321684574234318 14.117174594995985 2 30.514091159369777 26.069655134092066 30.42228014608938 12.993973560448776 3 28.678249756265124 25.670586630699987 32.359782987558155 13.291380625476734 4 27.99970701299751 27.962578487681917 30.004268517536282 14.03344598178429 5 23.44994721182455 32.74508615333323 28.916427983289637 14.88853865155258 6 22.03843181232667 41.84106970564909 25.83867529462874 10.281823187395497 7 88.06557857355742 4.553043276200868 5.811245649395588 1.5701325008461262 8 89.51952657341597 3.408499653972247 5.61550002273175 1.4564737498800269 9 85.39560822586267 5.025484817716621 7.055682684973302 2.5232242714474062 10 55.425058471113 22.18947166361051 12.142164365708396 10.243305499568097 11 48.73636726425912 20.59723885007653 18.19992321719935 12.466470668465 12 45.82859755204308 19.62949772935073 21.763125059986564 12.778779658619627 13 21.85607266077662 40.761058996469 22.116730062992204 15.266138279762176 14 14.794201888250717 43.61528280822991 25.534827567046037 16.055687736473345 15 13.508721414824132 23.647460863503415 48.15405559680948 14.689762124862979 16 15.54725425715166 17.26640600926445 48.34209768590783 18.844242047676058 17 15.372472355666014 18.230232217456972 29.70686145250832 36.690433974368695 18 19.573173503871974 23.5576704502402 35.91616530528741 20.952990740600423 19 32.14623082324296 23.558175600244493 24.968175549729494 19.327418026783054 20 35.37830683821561 21.73319492223216 24.85439051126232 18.034107728289918 21 23.087502083743768 29.548244351160076 26.770550765049684 20.593702800046472 22 21.689246871858597 26.267168785770934 22.407822752966496 29.635761589403977 23 20.676168538247435 31.684523719318452 24.009021979076685 23.630285763357428 24 19.420239340072033 22.78794813119756 40.81561519693273 16.976197331797678 25 18.184895004571608 24.190623405620297 37.63632735740878 19.98815423239931 26 16.984153444365305 36.22519082041412 26.739357752284544 20.051297982936035 27 17.686438237834725 38.437495264218704 26.489182212658047 17.386884285288517 28 16.12072579952617 29.998711867489053 37.254939104166986 16.625623228817798 29 16.870747268401352 25.67424896823112 36.391511459327845 21.063492304039684 30 18.52372436995166 33.74225226180915 29.154101060309863 18.57992230792934 31 30.207212531761307 27.898171862134465 24.265259318754705 17.62935628734953 32 33.67266784871767 24.497123170725548 25.68536226832558 16.1448467122312 33 31.557099630735348 27.03411277978996 22.528806178994852 18.879981410479843 34 21.083698304211435 26.420481812074097 25.870752319901396 26.625067563813076 35 21.193568430145334 24.571506508857805 31.310712716141058 22.924212344855803 36 32.59568803956335 26.37047196164901 23.350306373477604 17.683533625310037 37 21.292198968483692 36.59167714852926 26.16866453493365 15.947459348053405 38 20.14866564626366 36.01239638110537 23.250918110132805 20.588019862498168 39 21.938538398977574 34.662130419628106 24.57756830890933 18.821762872484985 40 27.35905052005193 24.75209763539283 26.483499275109747 21.405352569445498 41 17.034037007289314 25.038770262829544 27.89337293709367 30.03381979278747 42 19.698576992437903 25.98327448335783 23.93956385348629 30.378584670717967 43 20.68564010082794 25.660483630614113 25.943241345517553 27.710634923040395 44 18.81797424745278 29.864594541349053 30.016518405140406 21.30091280605776 45 17.16626002091321 39.35383737200762 22.658756017599426 20.821146589479746 46 19.694156929900334 36.967887614227045 23.411808386500372 19.92614706937225 47 21.284621718419285 28.40117497890999 25.590394067518353 24.723809235152377 48 21.96038613666328 24.801854910815766 32.554139451710185 20.683619500810764 49 20.784270639166298 27.036512242310355 32.831845666570686 19.347371451952657 50 18.75078929688171 36.938588913978 25.41586474103485 18.894757048105433 51 17.83911982663252 36.38305019675593 23.98161759134375 21.796212385267804 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1507.0 1 1643.0 2 1779.0 3 3818.0 4 5857.0 5 4320.5 6 2784.0 7 2832.5 8 2881.0 9 3168.5 10 3456.0 11 3520.5 12 3585.0 13 3635.0 14 3685.0 15 3693.0 16 3701.0 17 3464.5 18 3228.0 19 3167.0 20 3106.0 21 2935.0 22 2764.0 23 2892.0 24 3020.0 25 3492.0 26 5251.0 27 6538.0 28 8870.0 29 11202.0 30 12861.5 31 14521.0 32 15312.5 33 16104.0 34 18732.5 35 21361.0 36 23122.0 37 24883.0 38 29883.0 39 34883.0 40 47500.5 41 60118.0 42 72688.5 43 85259.0 44 85225.0 45 85191.0 46 76984.5 47 68778.0 48 61684.5 49 54591.0 50 48899.0 51 43207.0 52 38875.0 53 34543.0 54 31097.5 55 27652.0 56 27924.5 57 28197.0 58 29182.5 59 30168.0 60 29286.5 61 28405.0 62 25577.0 63 22749.0 64 18949.0 65 15149.0 66 12481.0 67 9813.0 68 8555.0 69 7297.0 70 6597.5 71 5898.0 72 5049.0 73 4200.0 74 3605.5 75 2187.5 76 1364.0 77 1034.5 78 705.0 79 568.0 80 431.0 81 319.5 82 208.0 83 138.0 84 68.0 85 40.5 86 13.0 87 13.5 88 14.0 89 9.0 90 4.0 91 3.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 791844.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.9489111759479 #Duplication Level Percentage of deduplicated Percentage of total 1 74.76964587882938 15.663426701726756 2 6.123310786962052 2.565533875575833 3 2.3841886442536815 1.4983846840552204 4 1.5375546730061833 1.2884038509188063 5 1.1402275673868822 1.194326301477747 6 0.9599805951887483 1.2066328931545613 7 0.8644451532047395 1.267642931167533 8 0.7616827790029 1.2765139905264724 9 0.7040794261168979 1.3274727622681737 >10 8.928604897458614 41.12079270731357 >50 1.5663550200037277 22.80786346719973 >100 0.2549736342321358 7.613338568062556 >500 0.003713208265516541 0.5766659279126464 >1k 0.0012377360885055136 0.5930013386403877 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3270 0.41296012851016106 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1304 0.16467890139977068 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 905 0.1142901884714666 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 810 0.10229287586948944 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.013386475113785039 0.0 2 0.0 0.0 0.0 0.057713387990563796 0.0 3 0.0 0.0 0.0 0.08259202570203222 0.0 4 0.0 0.0 0.0 0.11075413844141017 0.0 5 0.0 0.0 0.0 0.1930935891412955 0.0 6 0.0 0.0 0.0 0.27543303984118084 0.0 7 0.0 0.0 0.0 0.3351670278489197 0.0 8 0.0 0.0 0.0 0.4673900414728154 0.0 9 0.0 0.0 0.0 0.527629179484848 0.0 10 0.0 0.0 0.0 0.6249968428124731 0.0 11 0.0 0.0 0.0 0.7605033314642783 0.0 12 0.0 0.0 0.0 0.8633013573380616 0.0 13 0.0 0.0 0.0 0.9062391077030324 0.0 14 0.0 0.0 0.0 0.9221513328382863 0.0 15 0.0 0.0 0.0 0.9472825455519016 0.0 16 0.0 0.0 0.0 1.003480483529584 0.0 17 0.0 0.0 0.0 1.068644834083481 0.0 18 0.0 0.0 0.0 1.1670227974196938 0.0 19 0.0 0.0 0.0 1.2129914478104273 0.0 20 0.0 0.0 0.0 1.2593389607043812 0.0 21 0.0 0.0 0.0 1.3325857113269786 0.0 22 0.0 0.0 0.0 1.4063376119538697 0.0 23 0.0 0.0 0.0 1.4956228752127945 0.0 24 1.2628750107344377E-4 0.0 0.0 1.5653335758053355 0.0 25 1.2628750107344377E-4 0.0 0.0 1.62014235127121 0.0 26 1.2628750107344377E-4 0.0 0.0 1.678234601764994 0.0 27 1.2628750107344377E-4 0.0 0.0 1.7329170897297952 0.0 28 1.2628750107344377E-4 0.0 0.0 1.790883052722506 0.0 29 1.2628750107344377E-4 0.0 0.0 1.8565525532806968 0.0 30 1.2628750107344377E-4 0.0 0.0 1.9405337414945367 0.0 31 1.2628750107344377E-4 0.0 0.0 2.023757204701936 0.0 32 1.2628750107344377E-4 0.0 0.0 2.1049600678921605 0.0 33 2.5257500214688754E-4 0.0 0.0 2.1812377185405207 0.0 34 2.5257500214688754E-4 0.0 0.0 2.270396694298372 0.0 35 2.5257500214688754E-4 0.0 0.0 2.3855708952773527 0.0 36 2.5257500214688754E-4 0.0 0.0 2.480160233581362 0.0 37 2.5257500214688754E-4 0.0 0.0 2.5844737094680266 0.0 38 2.5257500214688754E-4 0.0 0.0 2.6759058602451997 0.0 39 2.5257500214688754E-4 0.0 0.0 2.7756729860932206 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGGGT 30 2.1646429E-6 45.000004 4 AGTAACT 35 1.2112832E-7 45.000004 31 AACGTAG 20 7.031956E-4 45.0 1 CGCATCG 20 7.031956E-4 45.0 21 TAAGTCG 25 3.889703E-5 45.0 1 TCTACGG 50 2.1827873E-11 45.0 2 GTCGTAC 20 7.031956E-4 45.0 17 CTACCGT 25 3.889703E-5 45.0 39 ATCGGTA 25 3.889703E-5 45.0 22 TCGGTAA 25 3.889703E-5 45.0 23 GCGATAT 90 0.0 42.5 9 TCGAAGG 85 0.0 42.35294 2 TAGGGTC 150 0.0 42.0 5 TTGCTAG 65 0.0 41.538464 1 GTTGATC 220 0.0 39.886364 16 ATTATAC 525 0.0 39.857143 42 GTATGGC 345 0.0 39.782608 9 GTACAAC 40 3.4564073E-7 39.375 9 AACAGCG 40 3.4564073E-7 39.375 1 CGGTAGT 115 0.0 39.130432 12 >>END_MODULE