##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545258_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3605404 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.13957548169359 31.0 31.0 33.0 30.0 34.0 2 31.437143243863932 31.0 31.0 34.0 30.0 34.0 3 31.46891721427058 31.0 31.0 34.0 30.0 34.0 4 35.28719250325345 37.0 35.0 37.0 33.0 37.0 5 35.170893469913494 37.0 35.0 37.0 32.0 37.0 6 35.163718407146604 37.0 35.0 37.0 32.0 37.0 7 35.7937640275542 37.0 35.0 37.0 35.0 37.0 8 35.865308020959645 37.0 35.0 37.0 35.0 37.0 9 37.484116620495236 39.0 37.0 39.0 35.0 39.0 10 36.75737892341607 39.0 37.0 39.0 32.0 39.0 11 36.45637687205095 38.0 35.0 39.0 32.0 39.0 12 35.96970186974885 38.0 35.0 39.0 31.0 39.0 13 35.768634804865144 38.0 35.0 39.0 30.0 39.0 14 36.60809634648433 39.0 35.0 41.0 30.0 41.0 15 36.867928809087694 39.0 35.0 41.0 31.0 41.0 16 36.695909251778716 38.0 35.0 41.0 31.0 41.0 17 36.74713957159863 38.0 35.0 41.0 31.0 41.0 18 36.66275845924618 38.0 35.0 40.0 31.0 41.0 19 36.492918408034164 38.0 35.0 40.0 31.0 41.0 20 36.290332234612265 38.0 35.0 40.0 31.0 41.0 21 36.15158273524964 38.0 35.0 40.0 30.0 41.0 22 36.09928429657259 37.0 35.0 40.0 30.0 41.0 23 35.99900538192114 37.0 34.0 40.0 30.0 41.0 24 35.733394371338136 37.0 34.0 40.0 30.0 41.0 25 35.67203425746463 37.0 34.0 40.0 29.0 41.0 26 35.542266275845925 37.0 34.0 40.0 29.0 41.0 27 35.52016140216187 37.0 34.0 40.0 29.0 41.0 28 35.450766959819205 37.0 34.0 40.0 29.0 41.0 29 35.33490615753463 37.0 34.0 40.0 28.0 41.0 30 35.16982729258635 36.0 34.0 40.0 27.0 41.0 31 34.96972489074734 36.0 34.0 40.0 26.0 41.0 32 34.69153997721199 36.0 33.0 40.0 25.0 41.0 33 34.331170376468215 36.0 33.0 40.0 23.0 41.0 34 33.92308240629899 36.0 33.0 40.0 21.0 41.0 35 33.64443956904691 36.0 33.0 40.0 21.0 41.0 36 33.43792207475223 36.0 32.0 40.0 19.0 41.0 37 33.233062924432325 35.0 32.0 40.0 18.0 41.0 38 33.190812458187764 35.0 32.0 40.0 18.0 41.0 39 33.126414404599316 35.0 32.0 40.0 18.0 41.0 40 32.98859517546438 35.0 32.0 40.0 18.0 41.0 41 32.871246606482934 35.0 31.0 40.0 18.0 41.0 42 32.76175540937992 35.0 31.0 40.0 18.0 41.0 43 32.59966788742676 35.0 31.0 39.0 17.0 41.0 44 32.500660397558775 35.0 31.0 39.0 17.0 41.0 45 32.439823387337455 35.0 31.0 39.0 17.0 41.0 46 32.34121002805788 35.0 31.0 39.0 17.0 41.0 47 32.33522512317621 35.0 31.0 39.0 17.0 41.0 48 32.26390301891272 35.0 31.0 39.0 17.0 41.0 49 32.19240423541994 35.0 31.0 39.0 17.0 41.0 50 32.02569920042248 35.0 30.0 39.0 15.0 40.0 51 31.85920606955559 35.0 30.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 6.0 13 21.0 14 64.0 15 181.0 16 557.0 17 1552.0 18 3341.0 19 6508.0 20 10987.0 21 16981.0 22 24759.0 23 35569.0 24 49877.0 25 70736.0 26 91635.0 27 103273.0 28 104863.0 29 108332.0 30 120208.0 31 139682.0 32 166926.0 33 208490.0 34 306457.0 35 385289.0 36 302186.0 37 357183.0 38 449126.0 39 540373.0 40 238.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.40532822396602 21.44181345557946 25.006878563400942 21.145979757053578 2 38.41358693782999 23.26280217140714 26.37765421018005 11.945956680582814 3 28.01636099588285 24.122705804952787 35.592321970020556 12.268611229143806 4 24.75334248256229 26.36692032293746 34.945986635616975 13.933750558883276 5 21.390168757786924 30.48127200169523 34.1715935301564 13.956965710361446 6 19.92320416796564 38.53202026735423 31.81624028818962 9.728535276490513 7 80.52343093866872 4.321485192782834 13.31404192151559 1.841041947032843 8 81.10724900732346 3.5785726093386483 13.371067431000796 1.9431109523371028 9 76.89052322569121 5.059349798247298 14.854895595611476 3.1952313804500134 10 44.00413934194337 22.87427428382506 20.980034415005917 12.141551959225652 11 33.544784440245806 23.229962578396208 27.436065417356836 15.78918756400115 12 29.588584247424144 20.89527276277499 32.76464995323686 16.751493036564003 13 22.86023979559572 27.05277966075369 32.780903332885856 17.30607721076473 14 18.855584561397283 29.300377988153336 34.75996032622142 17.084077124227964 15 17.32618591425538 22.30296521554866 43.157188487059976 17.21366038313598 16 20.806212008418473 19.772291815286163 39.65228307285397 19.76921310344139 17 20.26483023816471 20.03237362581281 33.96354472342073 25.73925141260175 18 22.35352820377411 21.851448547791037 36.657861365882994 19.137161882551858 19 27.832830939334396 23.04091302944136 30.39440240261563 18.73185362860861 20 28.09818261698273 23.076248875299413 30.60087024921479 18.224698258503068 21 23.53655790030743 24.173241057035494 33.37273714679409 18.917463895862987 22 23.158070496399294 21.70489076952264 31.428017498177734 23.709021235900334 23 21.479007623001472 25.266239234216194 31.202134351656568 22.052618791125767 24 20.58387908816876 23.20156076822459 37.043366013905796 19.17119412970086 25 21.961172728493118 23.89066523474207 34.34186571047239 19.806296326292422 26 19.732018936019376 26.63049688745006 31.678086561173174 21.95939761535739 27 19.34984262512606 26.42583189012937 33.18868010353347 21.035645381211094 28 19.757036936776018 24.316858804172846 36.04661225205275 19.879492006998383 29 20.16140216186591 23.926112025171104 35.33731587361638 20.5751699393466 30 21.407781208430457 25.187773686388542 33.930122671412136 19.474322433768865 31 25.78030090386542 24.48194432579539 30.44258008256495 19.295174687774242 32 26.88586355370993 23.58842448724193 29.96044271321605 19.56526924583209 33 26.162615895472463 24.718533623416405 28.543236763480596 20.575613717630535 34 21.50358184547418 25.46985025811254 30.505346973598517 22.521220922814752 35 22.41390978653155 25.752647969547933 30.938751940143185 20.89469030377733 36 27.247792480398868 26.074525906112044 27.28604062124522 19.391640992243865 37 22.752873187027028 29.562650953956894 28.30614821529016 19.378327643725918 38 22.588314652116654 29.379980717833565 27.827422391498985 20.204282238550796 39 22.209494414495573 27.91537370014567 27.958697555114487 21.916434330244268 40 24.358268865292214 24.42913471000753 30.047367784581148 21.16522864011911 41 20.946806515996546 24.745825987878195 29.9815221817028 24.325845314422462 42 22.219867731882477 26.001774003690016 27.59136008059014 24.186998183837375 43 21.65235851516224 25.11563197910692 29.383863777817965 23.84814572791288 44 21.33475194458097 26.1539622189358 30.82234334903939 21.68894248744385 45 20.216042363074983 29.859788251191823 28.129912764283837 21.794256621449357 46 21.668528686382995 28.576436926347228 28.54903361731445 21.20600076995532 47 21.277976060380475 27.40167260035214 29.12383743957681 22.196513899690576 48 21.783911040205204 26.103676592137802 30.52534473251819 21.58706763513881 49 22.030429876929187 26.264657164633974 30.624335025977672 21.080577932459164 50 20.615026776472206 29.00790036289969 29.184856953617405 21.1922159070107 51 20.56191206311415 29.00731790390203 29.195424424003523 21.235345608980296 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 11128.0 1 9740.0 2 8352.0 3 50303.5 4 92255.0 5 65084.0 6 37913.0 7 37250.0 8 36587.0 9 37826.5 10 39066.0 11 39060.0 12 39054.0 13 38414.0 14 37774.0 15 36053.5 16 34333.0 17 32133.0 18 29933.0 19 27777.5 20 25622.0 21 25877.5 22 26133.0 23 25055.0 24 23977.0 25 25907.0 26 30256.0 27 32675.0 28 36530.0 29 40385.0 30 48111.5 31 55838.0 32 64366.0 33 72894.0 34 84379.0 35 95864.0 36 101883.0 37 107902.0 38 119622.5 39 131343.0 40 154904.0 41 178465.0 42 199050.5 43 219636.0 44 228280.0 45 236924.0 46 234181.5 47 231439.0 48 225325.5 49 219212.0 50 203428.0 51 187644.0 52 179106.5 53 170569.0 54 163937.0 55 157305.0 56 158752.5 57 160200.0 58 159905.5 59 159611.0 60 152510.0 61 145409.0 62 136603.5 63 127798.0 64 119673.0 65 111548.0 66 97644.5 67 83741.0 68 75598.5 69 67456.0 70 59508.5 71 51561.0 72 46139.0 73 40717.0 74 31709.5 75 17970.0 76 13238.0 77 9937.5 78 6637.0 79 5101.0 80 3565.0 81 2640.0 82 1715.0 83 1283.5 84 852.0 85 586.5 86 321.0 87 258.5 88 196.0 89 117.5 90 39.0 91 29.0 92 19.0 93 17.5 94 16.0 95 9.0 96 2.0 97 1.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3605404.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.31979992983453 #Duplication Level Percentage of deduplicated Percentage of total 1 78.80858892751353 18.378005265421884 2 5.8896844949822 2.7469252814566687 3 2.414553760457851 1.6892073184112006 4 1.4985833363107863 1.3978665432380588 5 1.1220063208616458 1.3082481461251656 6 0.8441379086513573 1.1811076285763153 7 0.6277021866108101 1.0246522585098625 8 0.5429465230039318 1.012912343124079 9 0.46517573899991643 0.976302464912188 >10 6.098429195360834 34.02907585271752 >50 1.3208635287526387 21.242854436421794 >100 0.3610997862487238 11.614110322882572 >500 0.003907948075745579 0.6541609593816117 >1k 0.0020760974152396736 0.7808637068038042 >5k 1.2212337736703963E-4 0.281599632841315 >10k+ 1.2212337736703963E-4 1.6821078391759983 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 59065 1.6382352712761177 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 9888 0.27425497946970717 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.7736142745722808E-5 0.0 0.0 0.017834339785499767 0.0 2 5.5472285491445616E-5 0.0 0.0 0.06687184015993769 0.0 3 5.5472285491445616E-5 0.0 0.0 0.1324400816108264 0.0 4 5.5472285491445616E-5 0.0 0.0 0.17357278130273335 0.0 5 5.5472285491445616E-5 0.0 0.0 0.29009231697751486 0.0 6 5.5472285491445616E-5 0.0 0.0 0.5206351354799629 0.0 7 5.5472285491445616E-5 0.0 0.0 0.6803398454098348 0.0 8 5.5472285491445616E-5 0.0 0.0 1.009623332087056 0.0 9 5.5472285491445616E-5 0.0 0.0 1.2563640579530062 0.0 10 5.5472285491445616E-5 0.0 0.0 1.5812097617909115 0.0 11 5.5472285491445616E-5 0.0 0.0 1.8122795670055283 0.0 12 5.5472285491445616E-5 0.0 0.0 1.9689610373761166 0.0 13 8.320842823716843E-5 0.0 0.0 2.058188208589107 0.0 14 1.1094457098289123E-4 0.0 0.0 2.1214820863348463 0.0 15 1.1094457098289123E-4 0.0 0.0 2.1639461208785478 0.0 16 1.1094457098289123E-4 0.0 0.0 2.2242167590650035 0.0 17 1.1094457098289123E-4 0.0 0.0 2.2891470692327407 0.0 18 1.1094457098289123E-4 0.0 0.0 2.4023105316352895 0.0 19 1.3868071372861405E-4 0.0 0.0 2.459613402547953 0.0 20 1.3868071372861405E-4 0.0 0.0 2.5255699499972817 0.0 21 1.3868071372861405E-4 0.0 0.0 2.597933546420873 0.0 22 1.3868071372861405E-4 0.0 0.0 2.681585752941973 0.0 23 1.3868071372861405E-4 0.0 0.0 2.774640511853873 0.0 24 1.3868071372861405E-4 0.0 0.0 2.8571278003796525 0.0 25 1.6641685647433686E-4 0.0 0.0 2.9257192813898247 0.0 26 1.6641685647433686E-4 0.0 0.0 2.9908992168422732 0.0 27 1.6641685647433686E-4 0.0 0.0 3.073913492080222 0.0 28 1.6641685647433686E-4 0.0 0.0 3.1483572992097417 0.0 29 1.6641685647433686E-4 0.0 0.0 3.2397756256996444 0.0 30 1.6641685647433686E-4 0.0 0.0 3.367278673901732 0.0 31 1.6641685647433686E-4 0.0 0.0 3.455756969260588 0.0 32 1.6641685647433686E-4 0.0 0.0 3.549366451027402 0.0 33 1.6641685647433686E-4 0.0 0.0 3.643031405079708 0.0 34 1.6641685647433686E-4 0.0 0.0 3.7427705743933273 0.0 35 1.6641685647433686E-4 0.0 0.0 3.8616199460587497 0.0 36 1.9415299922005967E-4 0.0 0.0 3.9603883503762685 0.0 37 1.9415299922005967E-4 0.0 0.0 4.069585544366179 0.0 38 1.9415299922005967E-4 0.0 0.0 4.2042722535394095 0.0 39 1.9415299922005967E-4 0.0 0.0 4.44374611000598 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 36205 0.0 42.88082 1 ACGGGTA 270 0.0 40.833332 5 AGGGTAC 1545 0.0 39.32039 6 CATATGC 2485 0.0 38.57143 33 GCGCGAC 2145 0.0 37.972027 9 ATACTAT 3490 0.0 37.90831 45 GCTACGA 435 0.0 37.75862 10 TAGCATA 2550 0.0 37.588234 30 GTTTTTT 43095 0.0 37.439957 2 GTTGATC 2610 0.0 37.068966 16 ACCCGCT 2150 0.0 37.04651 34 CCAGTAG 2630 0.0 36.95817 26 GGTACCT 2650 0.0 36.849052 8 TAAGGGA 3105 0.0 36.811592 4 GCCCTAC 3775 0.0 36.71523 26 TATACTA 3615 0.0 36.65975 44 TAGGGTA 1710 0.0 36.578945 5 TTGATCC 2655 0.0 36.525425 17 CCCTACA 3790 0.0 36.451187 27 TAGCCGT 500 0.0 36.45 44 >>END_MODULE