##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545257_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4708582 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.120632708530934 31.0 31.0 33.0 30.0 34.0 2 31.420778909659003 31.0 31.0 34.0 30.0 34.0 3 31.469321549460112 31.0 31.0 34.0 30.0 34.0 4 35.285209644856984 37.0 35.0 37.0 33.0 37.0 5 35.16217154124108 37.0 35.0 37.0 32.0 37.0 6 35.1551789901928 37.0 35.0 37.0 32.0 37.0 7 35.78957465326079 37.0 35.0 37.0 35.0 37.0 8 35.8538804251471 37.0 35.0 37.0 35.0 37.0 9 37.45551080983617 39.0 37.0 39.0 35.0 39.0 10 36.705126511548485 39.0 37.0 39.0 32.0 39.0 11 36.454334447186014 38.0 35.0 39.0 32.0 39.0 12 35.98724159417846 38.0 35.0 39.0 31.0 39.0 13 35.785753120578555 38.0 35.0 39.0 30.0 39.0 14 36.63364087107329 39.0 35.0 41.0 31.0 41.0 15 36.89216774816707 39.0 35.0 41.0 31.0 41.0 16 36.690642533144796 38.0 35.0 41.0 31.0 41.0 17 36.72423162642171 38.0 35.0 41.0 31.0 41.0 18 36.65264446918414 38.0 35.0 40.0 31.0 41.0 19 36.511376461108675 38.0 35.0 40.0 31.0 41.0 20 36.33975366681519 38.0 35.0 40.0 31.0 41.0 21 36.24570539495755 38.0 35.0 40.0 30.0 41.0 22 36.171063177831456 38.0 35.0 40.0 30.0 41.0 23 36.06397934664831 38.0 34.0 40.0 30.0 41.0 24 35.823281191662375 37.0 34.0 40.0 30.0 41.0 25 35.76040621146664 37.0 34.0 40.0 30.0 41.0 26 35.628719219501754 37.0 34.0 40.0 29.0 41.0 27 35.606013232858636 37.0 34.0 40.0 29.0 41.0 28 35.54021847766482 37.0 34.0 40.0 29.0 41.0 29 35.420776361121035 37.0 34.0 40.0 29.0 41.0 30 35.24886175923027 37.0 34.0 40.0 27.0 41.0 31 35.0695447164348 37.0 34.0 40.0 27.0 41.0 32 34.80841748110153 37.0 33.0 40.0 25.0 41.0 33 34.47028744534979 37.0 33.0 40.0 23.0 41.0 34 34.10766277405809 36.0 33.0 40.0 22.0 41.0 35 33.84786162798057 36.0 33.0 40.0 21.0 41.0 36 33.67610822111625 36.0 33.0 40.0 20.0 41.0 37 33.492750683751495 36.0 32.0 40.0 19.0 41.0 38 33.458483254618905 36.0 32.0 40.0 19.0 41.0 39 33.40118914781563 36.0 32.0 40.0 19.0 41.0 40 33.2647196119766 36.0 32.0 40.0 18.0 41.0 41 33.15075281687778 35.0 32.0 40.0 18.0 41.0 42 33.04773581515624 35.0 32.0 40.0 18.0 41.0 43 32.88221613216038 35.0 31.0 40.0 18.0 41.0 44 32.79569454243337 35.0 31.0 39.0 18.0 41.0 45 32.749978655994525 35.0 31.0 39.0 18.0 41.0 46 32.65819858292794 35.0 31.0 39.0 18.0 41.0 47 32.65997746242924 35.0 31.0 39.0 18.0 41.0 48 32.59078147093966 35.0 31.0 39.0 18.0 41.0 49 32.550208746497354 35.0 31.0 39.0 18.0 41.0 50 32.384436758242714 35.0 31.0 39.0 18.0 41.0 51 32.20851946509586 35.0 31.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 5.0 12 13.0 13 22.0 14 70.0 15 246.0 16 729.0 17 1874.0 18 4175.0 19 8089.0 20 13873.0 21 21223.0 22 30916.0 23 44336.0 24 62380.0 25 87992.0 26 115041.0 27 128543.0 28 131672.0 29 137285.0 30 154441.0 31 178938.0 32 215119.0 33 268112.0 34 394899.0 35 500988.0 36 386159.0 37 463405.0 38 603679.0 39 754045.0 40 308.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.49490356119953 21.72367392136316 24.662669143279228 20.11875337415808 2 38.3355753388175 23.267026038837173 26.307410596226212 12.089988026119117 3 28.610184552376914 24.154087154051897 34.440071342072834 12.79565695149835 4 25.456644909231695 26.178051056560125 33.593956736868975 14.771347297339199 5 21.644180774594133 30.204995898977653 33.46771915621306 14.683104170215152 6 20.43555788133243 38.548399496918606 31.50848811807886 9.507554503670107 7 80.93230615926409 4.342071562096614 12.776925197437361 1.9486970812019417 8 81.45792087724075 3.725389087415277 12.726995091091117 2.0896949442528556 9 76.77430275186882 5.2189810010742095 14.494894641316641 3.511821605740327 10 41.57306807017484 23.740544393195233 21.311957612716526 13.3744299239134 11 33.3913054928214 23.916690842380998 27.238879985524306 15.453123679273292 12 30.392313439587543 21.169558053783497 32.33444803552322 16.10368047110574 13 22.89001232218107 27.383382088280506 32.34449352267838 17.382112066860046 14 19.024198792757566 29.599314613189275 34.18623696051168 17.190249633541477 15 18.26944927368792 22.65478226778253 41.918692294198124 17.15707616433143 16 21.462767346942243 20.05210910630844 39.292848675036346 19.192274871712968 17 20.834255408528513 20.22674767053011 33.65594992292797 25.283046998013415 18 22.387185781196973 22.308520909267376 36.351283677336404 18.953009632199247 19 27.441955985899792 24.000304125530786 30.090120550093424 18.467619338476 20 27.958332253744334 23.705098477630845 29.938333876313507 18.398235392311317 21 23.830656448162102 25.391954520490458 32.418804642246855 18.35858438910058 22 22.704542471597605 22.556217561890183 31.312548024012326 23.426691942499886 23 21.21662105491632 25.67673240054012 31.5048564514752 21.60179009306836 24 20.940911722467614 23.762270679368015 37.044677144838936 18.25214045332544 25 22.1068890804068 23.78234041586193 34.305105018878294 19.805665484852977 26 19.26212604983836 27.956144758655576 31.280436445622055 21.501292745884005 27 19.510757166382575 26.80167829720285 33.27328694711061 20.414277589303957 28 19.781454374161903 25.48529472354947 35.7786909094925 18.95455999279613 29 20.47210816334939 24.566206981210055 35.09782775366342 19.86385710177714 30 21.261326658429226 26.30545671711781 33.60147492387305 18.831741700579922 31 25.89138301085125 24.798697357293555 30.54698845639728 18.76293117545792 32 27.106695816277597 24.18277944400246 30.025515112617768 18.685009627102172 33 26.59503434367289 24.79793279590331 28.480485207648503 20.126547652775294 34 21.562521370552748 25.880403059774682 30.403081012500156 22.153994557172414 35 21.869110488040775 26.021910630419093 30.902339600329782 21.20663928121035 36 26.073221194831053 27.431315839885556 27.03546418008649 19.459998785196902 37 22.15265657473949 30.529828300749568 27.719003300781424 19.598511823729524 38 22.5394184491212 30.461654910119435 26.713690023875554 20.285236616883807 39 22.18081791928016 28.91044480057903 26.83839848175098 22.070338798389834 40 24.19896266009597 25.265462086037793 29.151706394833944 21.383868859032297 41 20.37949004604783 25.30853237768823 29.626371591277373 24.685605984986562 42 21.55400500617808 26.885758812313348 27.441382564857104 24.118853616651467 43 21.289169435723963 25.532124108701943 28.86380655577412 24.314899899799983 44 21.058080755522575 26.729852002152665 30.686881952995616 21.525185289329144 45 20.577384019222773 30.012241477370473 27.910589642486844 21.499784860919913 46 21.992034969338963 29.398171254105797 28.125155301532395 20.48463847502284 47 21.082950238521917 27.741303007996887 28.744980973040292 22.430765780440908 48 21.129015062284147 26.79726083139255 30.682676865349272 21.391047240974036 49 22.06112158607411 26.312762525957922 31.163479790731053 20.462636097236917 50 20.314183760631117 29.327279422977025 29.258808702917356 21.0997281134745 51 19.95044367922232 29.67628045980722 29.12573254538203 21.24754331558843 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 10504.0 1 10428.0 2 10352.0 3 59380.0 4 108408.0 5 76886.0 6 45364.0 7 44756.0 8 44148.0 9 44988.0 10 45828.0 11 45959.5 12 46091.0 13 45267.5 14 44444.0 15 42847.5 16 41251.0 17 39439.5 18 37628.0 19 35668.0 20 33708.0 21 33301.0 22 32894.0 23 32373.0 24 31852.0 25 34651.0 26 41670.0 27 45890.0 28 51733.0 29 57576.0 30 66905.0 31 76234.0 32 90169.5 33 104105.0 34 114918.5 35 125732.0 36 137867.0 37 150002.0 38 162476.5 39 174951.0 40 209203.0 41 243455.0 42 270515.0 43 297575.0 44 311975.5 45 326376.0 46 326023.5 47 325671.0 48 314292.0 49 302913.0 50 281947.0 51 260981.0 52 243105.0 53 225229.0 54 217469.5 55 209710.0 56 211882.5 57 214055.0 58 209869.5 59 205684.0 60 198494.5 61 191305.0 62 176337.0 63 161369.0 64 142515.0 65 123661.0 66 109255.0 67 94849.0 68 83926.5 69 73004.0 70 65072.0 71 57140.0 72 49649.0 73 42158.0 74 33057.5 75 17948.5 76 11940.0 77 9395.0 78 6850.0 79 5207.0 80 3564.0 81 2512.0 82 1460.0 83 1152.5 84 845.0 85 554.5 86 264.0 87 175.0 88 86.0 89 65.0 90 44.0 91 24.0 92 4.0 93 10.0 94 16.0 95 9.0 96 2.0 97 1.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4708582.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.343915771200155 #Duplication Level Percentage of deduplicated Percentage of total 1 79.85591582676531 17.04437941238528 2 5.943501911101383 2.537152083530301 3 2.3382261423816826 1.4972070551103869 4 1.3213375524643987 1.1281006970049554 5 0.9656273094477159 1.0305133979611338 6 0.755315550749514 0.9672834897525171 7 0.5969925433142061 0.8919510992373083 8 0.49283459426197235 0.8415216055248913 9 0.42725756574957713 0.8207414546370287 >10 5.129334918989636 26.425984068196804 >50 1.504619157362926 22.342113442353867 >100 0.6608439368185759 20.930503723656024 >500 0.005120619120722955 0.7589379749149319 >1k 0.002867546707462217 1.1201767125870672 >5k 1.0241238240936491E-4 0.19666373732868606 >10k+ 1.0241238240936491E-4 1.4667700458185495 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 67102 1.4250999557828663 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8997 0.19107663411192585 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.123781639567921E-5 0.0 0.0 0.016714161503399536 0.0 2 2.123781639567921E-5 0.0 0.0 0.05303082754001098 0.0 3 4.247563279135842E-5 0.0 0.0 0.09491180147229038 0.0 4 4.247563279135842E-5 0.0 0.0 0.13643173252584323 0.0 5 6.371344918703763E-5 0.0 0.0 0.24347032716006645 0.0 6 6.371344918703763E-5 0.0 0.0 0.4579297971236351 0.0 7 6.371344918703763E-5 0.0 0.0 0.6136879425695464 0.0 8 6.371344918703763E-5 0.0 0.0 0.93149062711449 0.0 9 6.371344918703763E-5 0.0 0.0 1.1233318226166604 0.0 10 6.371344918703763E-5 0.0 0.0 1.3815199565389324 0.0 11 6.371344918703763E-5 0.0 0.0 1.5498721271074816 0.0 12 8.495126558271684E-5 0.0 0.0 1.6714373881563493 0.0 13 1.0618908197839605E-4 0.0 0.0 1.7352570264253655 0.0 14 1.0618908197839605E-4 0.0 0.0 1.7792830198136085 0.0 15 1.2742689837407525E-4 0.0 0.0 1.8110547931415446 0.0 16 1.2742689837407525E-4 0.0 0.0 1.860411478445103 0.0 17 1.4866471476975446E-4 0.0 0.0 1.9146316237032721 0.0 18 1.4866471476975446E-4 0.0 0.0 2.007462119168786 0.0 19 1.4866471476975446E-4 0.0 0.0 2.054057888340906 0.0 20 1.4866471476975446E-4 0.0 0.0 2.1065365326546295 0.0 21 1.4866471476975446E-4 0.0 0.0 2.1637936856573803 0.0 22 1.4866471476975446E-4 0.0 0.0 2.232328119166237 0.0 23 1.6990253116543367E-4 0.0 0.0 2.307701129554503 0.0 24 1.9114034756111288E-4 0.0 0.0 2.3768302219224386 0.0 25 1.9114034756111288E-4 0.0 0.0 2.4344484178039165 0.0 26 1.9114034756111288E-4 0.0 0.0 2.4901764480261788 0.0 27 1.9114034756111288E-4 0.0 0.0 2.554293415724734 0.0 28 1.9114034756111288E-4 0.0 0.0 2.618580285954455 0.0 29 1.9114034756111288E-4 0.0 0.0 2.6975000116807992 0.0 30 1.9114034756111288E-4 0.0 0.0 2.815136276696466 0.0 31 2.123781639567921E-4 0.0 0.0 2.9005122986070964 0.0 32 2.548537967481505E-4 0.0 0.0 2.987799723993338 0.0 33 2.548537967481505E-4 0.0 0.0 3.0760853267501767 0.0 34 2.548537967481505E-4 0.0 0.0 3.170338755914201 0.0 35 2.760916131438297E-4 0.0 0.0 3.2879962587462637 0.0 36 2.9732942953950893E-4 0.0 0.0 3.386815818435359 0.0 37 3.3980506233086735E-4 0.0 0.0 3.488714861501828 0.0 38 3.3980506233086735E-4 0.0 0.0 3.6156108144660113 0.0 39 3.3980506233086735E-4 0.0 0.0 3.8451066584377207 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 43675 0.0 42.568405 1 TACGGGA 830 0.0 39.307228 4 ACGTTAG 220 0.0 38.863632 1 GGGCGAT 7690 0.0 37.773083 7 CGTAAGG 540 0.0 37.5 2 TAGGGAC 3040 0.0 37.154606 5 GTTTTTT 52445 0.0 36.9816 2 ACGGGCT 1655 0.0 36.97885 5 AGGGCGA 4060 0.0 36.687195 6 CGGTCTA 455 0.0 36.593407 31 TCGTAAG 160 0.0 36.5625 1 ACGGGAT 1035 0.0 36.52174 5 ATAGGGC 2335 0.0 36.52034 4 TACGGGC 780 0.0 36.346157 4 CATATGC 3090 0.0 36.33495 33 TCAGACG 3030 0.0 36.311882 22 GGTACCT 3255 0.0 36.082947 8 ACCCGCT 3025 0.0 36.07438 34 GCGTAAG 275 0.0 36.0 1 GTAGCAT 3110 0.0 35.95659 29 >>END_MODULE