##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545256_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2018483 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.38283205754024 31.0 31.0 34.0 30.0 34.0 2 31.639027428023915 31.0 31.0 34.0 30.0 34.0 3 31.71271940363134 31.0 31.0 34.0 30.0 34.0 4 35.467501584110444 37.0 35.0 37.0 33.0 37.0 5 35.34450723637504 37.0 35.0 37.0 33.0 37.0 6 35.33608506982719 37.0 35.0 37.0 33.0 37.0 7 35.93390035982468 37.0 35.0 37.0 35.0 37.0 8 36.029895718715494 37.0 35.0 37.0 35.0 37.0 9 37.693198803259676 39.0 38.0 39.0 35.0 39.0 10 36.96146561551423 39.0 37.0 39.0 32.0 39.0 11 36.612766617306164 39.0 35.0 39.0 32.0 39.0 12 35.609431439353216 37.0 35.0 39.0 31.0 39.0 13 35.155029296754044 37.0 35.0 39.0 30.0 39.0 14 35.94786381653945 38.0 35.0 40.0 30.0 41.0 15 36.404133203004434 38.0 35.0 40.0 31.0 41.0 16 36.3443927939943 38.0 35.0 40.0 31.0 41.0 17 36.43999528358673 38.0 35.0 40.0 31.0 41.0 18 36.5257720773472 37.0 35.0 40.0 31.0 41.0 19 36.44913234344803 37.0 35.0 40.0 31.0 41.0 20 36.31659419474923 37.0 35.0 40.0 31.0 41.0 21 36.17796632421477 37.0 35.0 40.0 31.0 41.0 22 36.068739246255724 36.0 35.0 40.0 31.0 41.0 23 36.02078243908916 36.0 34.0 40.0 31.0 41.0 24 35.84301576976373 36.0 34.0 40.0 31.0 41.0 25 35.83225174549402 36.0 34.0 40.0 31.0 41.0 26 35.70288132226033 36.0 34.0 40.0 30.0 41.0 27 35.66115543207448 36.0 34.0 40.0 30.0 41.0 28 35.720912685417716 36.0 34.0 40.0 30.0 41.0 29 35.74875190923084 36.0 34.0 40.0 30.0 41.0 30 35.66438310354856 36.0 34.0 40.0 30.0 41.0 31 35.53518855496925 36.0 34.0 40.0 30.0 41.0 32 35.39132655563609 36.0 34.0 40.0 30.0 41.0 33 35.21423118252668 36.0 34.0 40.0 29.0 41.0 34 35.055031922488325 35.0 34.0 40.0 29.0 41.0 35 34.89905587512999 35.0 34.0 40.0 27.0 41.0 36 34.66511929998915 35.0 33.0 40.0 26.0 41.0 37 34.48931945426342 35.0 33.0 40.0 26.0 41.0 38 34.572919861103614 35.0 33.0 40.0 27.0 41.0 39 34.5798433774275 35.0 33.0 40.0 27.0 41.0 40 34.41732677461242 35.0 33.0 40.0 25.0 41.0 41 34.46360806605753 35.0 34.0 40.0 26.0 41.0 42 34.402639506996096 35.0 33.0 40.0 26.0 41.0 43 34.26076662523291 35.0 33.0 40.0 26.0 41.0 44 34.2223902802253 35.0 33.0 40.0 26.0 41.0 45 34.16252452956007 35.0 33.0 39.0 25.0 41.0 46 34.07422752631555 35.0 33.0 39.0 24.0 41.0 47 34.12383012390989 35.0 33.0 39.0 25.0 41.0 48 34.09385067895048 35.0 33.0 39.0 25.0 41.0 49 34.08446343120056 35.0 33.0 39.0 25.0 41.0 50 33.876811447012436 35.0 33.0 39.0 24.0 41.0 51 33.68842541651329 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 6.0 14 19.0 15 46.0 16 117.0 17 359.0 18 860.0 19 1681.0 20 2968.0 21 4872.0 22 7408.0 23 11224.0 24 16256.0 25 22644.0 26 30368.0 27 35997.0 28 41075.0 29 47552.0 30 57936.0 31 73713.0 32 94188.0 33 126680.0 34 222307.0 35 328451.0 36 141324.0 37 169373.0 38 234224.0 39 346512.0 40 320.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.2363378834501 24.496119115196908 28.644184766480567 14.623358234872427 2 30.68948314154739 26.272304497981903 29.900821557575664 13.137390802895046 3 29.03096037965145 25.879881079008342 31.364049139873856 13.725109401466348 4 26.175548666993976 28.37591399085353 30.488391529678477 14.960145812474021 5 22.672571431119312 33.55316839428422 30.005305964925142 13.768954209671321 6 20.89014373665768 41.88174980913884 27.003893518052912 10.224212936150565 7 86.95337042719706 5.315080681878421 6.0964595688940655 1.6350893220304554 8 88.81357930683588 3.8194029872929325 5.894228487433384 1.4727892184378069 9 84.68131760336847 5.305915382988116 7.566523968742862 2.4462430449005517 10 54.01462385365643 22.50170053451032 13.637865664461875 9.845809947371368 11 48.01482103143797 20.816127755348944 19.18936151555401 11.979689697659083 12 43.03514074678855 22.023717811841863 23.26648279921109 11.674658642158493 13 20.702973470670795 43.776043692218366 21.770111514439307 13.750871322671532 14 14.150874691538151 45.14979814048471 26.02816075240663 14.671166415570505 15 13.143880825352506 23.917119936110435 49.11777805411292 13.821221184424145 16 15.157868557723795 18.752102445252202 46.59588413675022 19.494144860273778 17 14.860417452116268 19.444305451172987 29.711075099468264 35.98420199724248 18 20.010869549062342 23.87416688671641 37.30613535016148 18.808828214059766 19 31.81760757955356 23.836168052938767 24.770780828969084 19.575443538538593 20 33.14380155790264 23.300716429120286 25.183962411375276 18.371519601601797 21 21.116650474638625 31.28195778711042 27.56282812389304 20.038563614357912 22 21.4375845622678 25.86769370859205 22.946093675299718 29.74862805384043 23 17.690859918067183 32.518728173583824 24.935359871745266 24.855052036603727 24 17.122710471180586 23.896758109927106 43.161076907756964 15.819454511135342 25 16.497488460393274 26.190708566780103 38.71570877733427 18.59609419549236 26 15.224304589139468 37.51079399727419 27.0325288843156 20.232372529270744 27 16.237937104251063 39.375560755280084 27.196562963373978 17.189939177094878 28 14.514315949155876 30.9809396462591 38.29940603908975 16.205338365495276 29 15.146523403962284 25.489637514905993 37.59357894022392 21.7702601409078 30 17.600841820317537 35.16333801176428 30.488242903209983 16.747577264708198 31 30.839893127660723 28.44339040754864 24.29240176905131 16.424314695739326 32 33.031192236942296 24.751707098846015 26.569953772214085 15.647146891997604 33 30.84410421093465 27.295151854139966 23.127368424703107 18.73337551022228 34 19.6072000606396 27.358070392468008 27.01741852668563 26.01731102020676 35 20.952071431862443 24.873333092228172 31.990856499658406 22.18373897625098 36 32.02781494815661 26.9989888445927 23.969337368707095 17.0038588385436 37 19.67423059792924 38.24277935459451 26.719571083828797 15.363418963647451 38 19.354980943609633 37.380696295188024 23.742037956227524 19.522284804974824 39 20.745084303410035 35.89646283867637 25.833757331619832 17.52469552629376 40 25.864077131192087 26.1751027875885 25.668137903564208 22.292682177655198 41 16.914137993730936 24.966274177191487 27.51764567747165 30.601942151605932 42 19.30296167963763 26.068091730274666 24.520791108966485 30.10815548112122 43 19.43850901890182 25.55102024639296 27.20984026122588 27.800630473479345 44 17.100763296000014 30.373354643066104 31.27665677640089 21.249225284532987 45 16.429318453511872 41.265643555085674 22.82957052400243 19.475467467400023 46 19.887311411589792 37.40635913208087 24.295423840577303 18.41090561575203 47 19.915500898447004 29.15298271028292 26.22811289468378 24.703403496586297 48 19.998186757084405 25.7238728292485 34.019459168098024 20.258481245569072 49 20.769855381491944 27.04253639986069 33.83407241973303 18.353535798914333 50 18.77246427143553 37.35651972298008 25.881862765254898 17.989153240329493 51 17.161105642207538 35.882987372199814 25.086512990201054 21.86939399539159 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6727.0 1 6005.5 2 5284.0 3 11132.5 4 16981.0 5 12259.0 6 7537.0 7 7663.0 8 7789.0 9 8462.0 10 9135.0 11 9559.0 12 9983.0 13 10225.0 14 10467.0 15 9917.0 16 9367.0 17 9229.5 18 9092.0 19 8446.5 20 7801.0 21 7661.0 22 7521.0 23 8000.5 24 8480.0 25 11499.0 26 15849.0 27 17180.0 28 22889.0 29 28598.0 30 33449.0 31 38300.0 32 44730.0 33 51160.0 34 59266.0 35 67372.0 36 69295.5 37 71219.0 38 85415.5 39 99612.0 40 133651.5 41 167691.0 42 199649.0 43 231607.0 44 228297.0 45 224987.0 46 203928.0 47 182869.0 48 162492.0 49 142115.0 50 126026.0 51 109937.0 52 100106.5 53 90276.0 54 77248.0 55 64220.0 56 62266.5 57 60313.0 58 57120.5 59 53928.0 60 52201.0 61 50474.0 62 45608.5 63 40743.0 64 34197.5 65 27652.0 66 24467.0 67 21282.0 68 18040.5 69 14799.0 70 12961.0 71 11123.0 72 10012.0 73 8901.0 74 7069.0 75 4208.0 76 3179.0 77 2228.5 78 1278.0 79 1122.5 80 967.0 81 714.5 82 462.0 83 328.0 84 194.0 85 146.0 86 98.0 87 60.5 88 23.0 89 13.0 90 3.0 91 1.5 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2018483.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.300005201419395 #Duplication Level Percentage of deduplicated Percentage of total 1 78.33827852682958 12.769143474575637 2 7.846245315803412 2.5578767891841636 3 2.780031077121058 1.3594356305154245 4 1.4203303292210563 0.9260556701614776 5 0.8946208952258804 0.7291162622740164 6 0.6271045333797808 0.6133084293554466 7 0.456594487853439 0.5209744768865335 8 0.34235496113676694 0.44643101178088296 9 0.3105169632156117 0.4555285303989083 >10 4.093241965709861 16.09089953399041 >50 1.537884097379407 17.66763031881818 >100 1.3235726643640058 41.412401584708185 >500 0.025139081944216154 2.553003109668624 >1k 0.003456623767329721 1.0754851492428645 >5k 3.142385243027019E-4 0.3020496225691848 >10k+ 3.142385243027019E-4 0.5206604058700633 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10165 0.5035960174051504 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5897 0.29215009489800015 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3941 0.1952456374415836 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3549 0.17582511222536926 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3105 0.15382839488863667 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.025415126112035624 0.0 2 0.0 0.0 0.0 0.08922542325102564 0.0 3 0.0 0.0 0.0 0.1217250776944864 0.0 4 4.954215616381213E-5 0.0 0.0 0.16155697125019136 0.0 5 4.954215616381213E-5 0.0 0.0 0.2778819539228222 0.0 6 4.954215616381213E-5 0.0 0.0 0.402678645299465 0.0 7 4.954215616381213E-5 0.0 0.0 0.4986913439449329 0.0 8 4.954215616381213E-5 0.0 0.0 0.7726594675308139 0.0 9 4.954215616381213E-5 0.0 0.0 0.8941368344444813 0.0 10 4.954215616381213E-5 0.0 0.0 1.096714710998309 0.0 11 4.954215616381213E-5 0.0 0.0 1.2811601583961816 0.0 12 4.954215616381213E-5 0.0 0.0 1.4356821434711118 0.0 13 4.954215616381213E-5 0.0 0.0 1.4961235739909626 0.0 14 4.954215616381213E-5 0.0 0.0 1.5180212070153676 0.0 15 4.954215616381213E-5 0.0 0.0 1.550322692834173 0.0 16 9.908431232762426E-5 0.0 0.0 1.62760845644972 0.0 17 9.908431232762426E-5 0.0 0.0 1.7276340697444565 0.0 18 9.908431232762426E-5 0.0 0.0 1.8783413087947731 0.0 19 9.908431232762426E-5 0.0 0.0 1.937742354035184 0.0 20 9.908431232762426E-5 0.0 0.0 2.007943589319306 0.0 21 9.908431232762426E-5 0.0 0.0 2.1050462154003773 0.0 22 9.908431232762426E-5 0.0 0.0 2.2063103825992094 0.0 23 1.4862646849143638E-4 0.0 0.0 2.3328905915977494 0.0 24 1.4862646849143638E-4 0.0 0.0 2.425534423624078 0.0 25 1.4862646849143638E-4 0.0 0.0 2.5035633195820823 0.0 26 1.4862646849143638E-4 0.0 0.0 2.5791646498880594 0.0 27 1.4862646849143638E-4 0.0 0.0 2.6543201007885626 0.0 28 1.4862646849143638E-4 0.0 0.0 2.7379472603930775 0.0 29 1.4862646849143638E-4 0.0 0.0 2.8296993336084575 0.0 30 1.4862646849143638E-4 0.0 0.0 2.9638594925000605 0.0 31 1.4862646849143638E-4 0.0 0.0 3.076964235022044 0.0 32 1.4862646849143638E-4 0.0 0.0 3.176395342442815 0.0 33 1.4862646849143638E-4 0.0 0.0 3.2692373430937987 0.0 34 1.4862646849143638E-4 0.0 0.0 3.37282999163233 0.0 35 1.4862646849143638E-4 0.0 0.0 3.5223977610908785 0.0 36 1.4862646849143638E-4 0.0 0.0 3.637583274171742 0.0 37 1.4862646849143638E-4 0.0 0.0 3.751976112753984 0.0 38 1.4862646849143638E-4 0.0 0.0 3.86433772293351 0.0 39 2.9725293698287277E-4 0.0 0.0 3.9818021751979087 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAACG 60 0.0 45.000004 1 TCTAGCG 30 2.1663218E-6 45.000004 1 CCGTAAG 70 0.0 45.000004 1 TAATGCG 105 0.0 45.000004 1 GTCGCAA 25 3.891858E-5 45.0 35 CATTCGA 25 3.891858E-5 45.0 16 TCCTATA 25 3.891858E-5 45.0 44 CCGTACA 20 7.0345565E-4 45.0 44 CGTAGTG 20 7.0345565E-4 45.0 36 GTATGCG 50 2.1827873E-11 45.0 1 CTACGAT 20 7.0345565E-4 45.0 31 CACCGTT 25 3.891858E-5 45.0 24 TCGACAC 20 7.0345565E-4 45.0 34 ACGCGTA 25 3.891858E-5 45.0 23 TACGGGA 305 0.0 42.78688 4 GCTACGA 515 0.0 42.37864 10 ACGTTAG 165 0.0 42.272728 1 CGACGGT 215 0.0 41.860462 28 CCCGTAT 70 0.0 41.785717 31 CTTTACG 70 0.0 41.785717 19 >>END_MODULE