SRR1545255_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545255_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3214657
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15942	0.49591604951943546	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8666	0.26957774966349446	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5018	0.15609752455705228	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	3351	0.10424129230583543	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGAAA	35	1.2128476E-7	45.0	18
ACGTTAC	25	3.892376E-5	45.0	31
CGCGAAA	20	7.0351816E-4	45.0	30
CGTTAGG	615	0.0	41.707317	2
CGGTCTA	245	0.0	40.408165	31
ACGTTAG	145	0.0	40.344826	1
CGTTTTT	11485	0.0	40.10231	1
GGGCGAT	5450	0.0	40.00459	7
TAGTAGG	1335	0.0	38.932583	2
ACGGGAT	715	0.0	38.706295	5
CGTAAGT	105	0.0	38.57143	37
TAATGCG	105	0.0	38.57143	1
TTACGTA	35	6.2517956E-6	38.571426	24
ACGGTAC	35	6.2517956E-6	38.571426	15
ATAGGGC	1150	0.0	38.543476	4
TGGGCGA	1850	0.0	38.43243	6
CATATGC	1675	0.0	38.417908	33
AGGGCGA	2560	0.0	38.23242	6
TCGTTAG	165	0.0	38.181816	1
ACATACG	1055	0.0	38.175354	17