##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545255_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3214657 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14963991492716 31.0 31.0 33.0 30.0 34.0 2 31.40947385677539 31.0 31.0 34.0 30.0 34.0 3 31.508562810900198 31.0 31.0 34.0 30.0 34.0 4 35.285720062824744 37.0 35.0 37.0 33.0 37.0 5 35.13488001985904 37.0 35.0 37.0 32.0 37.0 6 35.12155542566439 37.0 35.0 37.0 32.0 37.0 7 35.78804799392284 37.0 35.0 37.0 35.0 37.0 8 35.86665233647011 37.0 35.0 37.0 35.0 37.0 9 37.49214737373225 39.0 37.0 39.0 35.0 39.0 10 36.711105103903776 39.0 37.0 39.0 32.0 39.0 11 36.39844561954821 38.0 35.0 39.0 32.0 39.0 12 35.55121152894383 37.0 35.0 39.0 31.0 39.0 13 35.14553869977419 37.0 35.0 39.0 30.0 39.0 14 35.87050002535263 38.0 34.0 40.0 27.0 41.0 15 36.301882284797415 38.0 35.0 40.0 30.0 41.0 16 36.225152792350784 38.0 35.0 40.0 31.0 41.0 17 36.27863936961237 38.0 35.0 40.0 31.0 41.0 18 36.332061865387196 38.0 35.0 40.0 31.0 41.0 19 36.24940110251265 37.0 35.0 40.0 31.0 41.0 20 36.11080031244391 37.0 34.0 40.0 30.0 41.0 21 35.970989128855734 37.0 34.0 40.0 30.0 41.0 22 35.89340666826974 37.0 34.0 40.0 30.0 41.0 23 35.82317864705317 37.0 34.0 40.0 30.0 41.0 24 35.627480319051145 36.0 34.0 40.0 30.0 41.0 25 35.59345273850367 36.0 34.0 40.0 30.0 41.0 26 35.457039429089946 36.0 34.0 40.0 29.0 41.0 27 35.411497089736166 36.0 34.0 40.0 29.0 41.0 28 35.441428432333524 36.0 34.0 40.0 29.0 41.0 29 35.40418993379387 36.0 34.0 40.0 29.0 41.0 30 35.29828874433571 36.0 34.0 40.0 29.0 41.0 31 35.14927937879531 36.0 34.0 40.0 29.0 41.0 32 35.010030619129815 36.0 34.0 40.0 27.0 41.0 33 34.81681840395414 36.0 33.0 40.0 27.0 41.0 34 34.63639417829025 36.0 34.0 40.0 26.0 41.0 35 34.46815010123942 36.0 33.0 40.0 25.0 41.0 36 34.26288154537171 35.0 33.0 40.0 24.0 41.0 37 34.08602721845597 35.0 33.0 40.0 23.0 41.0 38 34.13244274583572 35.0 33.0 40.0 24.0 41.0 39 34.12055718541667 35.0 33.0 40.0 24.0 41.0 40 33.97267297879681 35.0 33.0 40.0 23.0 41.0 41 33.94092433500681 35.0 33.0 40.0 23.0 41.0 42 33.8628811720815 35.0 33.0 40.0 23.0 41.0 43 33.69431544329613 35.0 33.0 40.0 23.0 41.0 44 33.65969650883438 35.0 33.0 39.0 23.0 41.0 45 33.60502131331585 35.0 33.0 39.0 23.0 41.0 46 33.52331710661511 35.0 32.0 39.0 23.0 41.0 47 33.534049511347554 35.0 32.0 39.0 23.0 41.0 48 33.51359569621269 35.0 32.0 39.0 23.0 41.0 49 33.50131786999359 35.0 32.0 39.0 23.0 41.0 50 33.30379944112234 35.0 32.0 39.0 23.0 41.0 51 33.099322882659024 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 7.0 13 8.0 14 42.0 15 141.0 16 419.0 17 1040.0 18 2232.0 19 4206.0 20 7451.0 21 11826.0 22 17286.0 23 24523.0 24 33519.0 25 45099.0 26 57793.0 27 67669.0 28 76834.0 29 88229.0 30 105211.0 31 128317.0 32 157484.0 33 203352.0 34 324103.0 35 446459.0 36 240027.0 37 287952.0 38 380944.0 39 502176.0 40 303.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.36392840666983 23.493797316478865 26.923432266646174 14.218842010205131 2 32.507107290140134 25.024722699809033 29.01597277718898 13.452197232861856 3 29.442643491980636 26.14549546032438 30.652010463324704 13.759850584370275 4 26.403407890795194 27.939372692016594 30.223846587676384 15.433372829511827 5 22.88088589233626 32.61570363494457 29.86091517695356 14.642495295765615 6 21.29707772866592 41.14796695261734 27.512359794528624 10.042595524188117 7 85.38839446945661 5.428821799650787 7.210224916686291 1.9725588142063057 8 86.44645447399209 4.286056024017492 7.249109313995242 2.0183801879951733 9 82.49716843818796 5.720081489253753 8.682885919088724 3.0998641534695617 10 50.236681549540116 22.764077162820172 14.909086723715781 12.090154563923928 11 43.60126134763367 22.144290977233343 20.629914793397866 13.624532881735126 12 38.52432778986996 22.151881211588048 25.162653433943344 14.16113756459865 13 22.28626568868778 38.10944682434238 24.68303772377582 14.92124976319402 14 16.247301033982787 40.11557065030577 28.635621156471746 15.001507159239694 15 15.452130662773664 23.440416815853137 45.93280091779621 15.174651603576992 16 18.231431844828236 18.972195167322674 43.52551454167583 19.27085844617326 17 18.01806537991456 19.572912444469193 29.71791391741016 32.691108258206086 18 22.155987403943872 22.210176700033628 35.79731834531647 19.83651755070603 19 31.451784747175203 23.478056912448203 25.98118555105568 19.088972789320913 20 32.29414522295847 23.402870041811617 25.595265684643802 18.707719050586114 21 23.023887151879656 29.463236668795457 28.627657631902874 18.88521854742201 22 22.287230021741046 24.26361506064255 25.396893043332465 28.052261874283946 23 19.23822665995159 31.030713385596037 26.029433311236627 23.701626643215747 24 18.54966175240469 24.448082641476212 39.87719374104298 17.12506186507612 25 18.85019148232611 25.533641691788578 36.07579284508425 19.540373980801064 26 17.39435964707899 33.742480146404425 27.83114963742633 21.032010569090264 27 17.69025435684118 34.620520945158376 28.722411131265325 18.966813566735112 28 16.842107882738343 28.385081207730718 36.80663286938544 17.966178040145497 29 17.31711968026449 25.5706596380267 36.23338353049797 20.878837151210845 30 19.77529795558282 31.54672489164474 30.509849106763177 18.16812804600926 31 29.862781628024386 26.603895843320142 25.624631181491527 17.908691347163945 32 31.66636440528492 24.442545503299417 25.887894105032043 18.003195986383616 33 30.234049853530255 24.965742845970816 24.573757013578742 20.22645028692019 34 20.66743045992154 25.46473853975712 27.501721023424896 26.366109976896446 35 20.918965849233683 25.06413592492138 32.003196608533976 22.01370161731096 36 30.879904139073 25.975337337700417 24.519847685149614 18.62491083807697 37 20.507413388115747 34.215687707895434 26.631146028954255 18.645752875034567 38 21.060909453170275 34.68796204385102 24.21938017026389 20.031748332714812 39 20.795904508630315 33.08617373486503 25.01128425209906 21.1066375044056 40 26.0105510479034 24.284488205117995 26.99373525698076 22.711225489997844 41 18.713318403798603 23.91894376289601 27.434590999910725 29.93314683339467 42 20.898901500222262 24.665648621299255 25.423707723716717 29.011742154761766 43 20.188281362521725 24.43025803374979 27.913149054471443 27.468311549257045 44 18.7544114348747 28.430809258966043 31.330278782464195 21.484500523695065 45 17.904865122468742 36.95115839730335 24.331616094656443 20.812360385571463 46 21.050955047459187 33.35152086210131 25.4194771012895 20.17804698915001 47 20.076978663664583 28.168697313585866 26.701417911770992 25.052906110978558 48 20.83985943134835 25.622578085313613 32.66423136278614 20.873331120551896 49 21.152956598480024 26.1206405535645 32.846085912120635 19.880316935834834 50 19.979363272660194 34.315853915363284 26.242177625793357 19.46260518618316 51 18.517932084200588 34.581169935081725 25.67147910336935 21.229418877348348 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 9918.0 1 9064.5 2 8211.0 3 18347.0 4 28483.0 5 20941.5 6 13400.0 7 13621.0 8 13842.0 9 14577.0 10 15312.0 11 15639.5 12 15967.0 13 16076.5 14 16186.0 15 15376.5 16 14567.0 17 14402.5 18 14238.0 19 13358.0 20 12478.0 21 13807.5 22 15137.0 23 15954.0 24 16771.0 25 18852.5 26 23846.5 27 26759.0 28 32456.0 29 38153.0 30 44872.5 31 51592.0 32 61183.5 33 70775.0 34 86431.0 35 102087.0 36 102084.0 37 102081.0 38 124871.5 39 147662.0 40 183591.5 41 219521.0 42 272830.5 43 326140.0 44 316794.5 45 307449.0 46 286629.5 47 265810.0 48 247541.5 49 229273.0 50 211502.5 51 193732.0 52 174176.0 53 154620.0 54 144603.5 55 134587.0 56 127700.5 57 120814.0 58 113997.0 59 107180.0 60 101006.5 61 94833.0 62 86487.0 63 78141.0 64 72151.0 65 66161.0 66 58566.0 67 50971.0 68 42663.5 69 34356.0 70 31235.5 71 28115.0 72 23226.0 73 18337.0 74 16126.5 75 10793.5 76 7671.0 77 6044.5 78 4418.0 79 3425.0 80 2432.0 81 1616.0 82 800.0 83 591.5 84 383.0 85 293.0 86 203.0 87 167.5 88 132.0 89 82.5 90 33.0 91 26.5 92 20.0 93 17.5 94 15.0 95 28.0 96 41.0 97 20.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3214657.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.907845471776398 #Duplication Level Percentage of deduplicated Percentage of total 1 79.11481185069769 14.167758251509582 2 7.184532951378343 2.57319011760338 3 2.590890441697074 1.3919179699264108 4 1.5012144736391875 1.0753406725569883 5 1.0276177557823605 0.9201209987302084 6 0.7074493914706675 0.7601336628935378 7 0.5685427867321452 0.7126963458224665 8 0.4358944021238884 0.6244743676197564 9 0.3621284096910231 0.5836445641518277 >10 3.9130565659451313 16.745872944512186 >50 1.4671086075149469 18.593879986269112 >100 1.1033795445541996 37.86038493799887 >500 0.01995679141427815 2.2889906959252655 >1k 0.0028766546182743286 0.7477356728017606 >5k 3.595818272842911E-4 0.44057935526262876 >10k+ 1.7979091364214554E-4 0.5132794564160208 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15942 0.49591604951943546 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8666 0.26957774966349446 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5018 0.15609752455705228 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3351 0.10424129230583543 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.110751784716068E-5 0.0 0.0 0.0230195632068989 0.0 2 3.110751784716068E-5 0.0 0.0 0.06846764678160065 0.0 3 3.110751784716068E-5 0.0 0.0 0.10445904493076555 0.0 4 3.110751784716068E-5 0.0 0.0 0.1517424720584498 0.0 5 3.110751784716068E-5 0.0 0.0 0.28245626205221896 0.0 6 3.110751784716068E-5 0.0 0.0 0.4439976022325243 0.0 7 3.110751784716068E-5 0.0 0.0 0.5644148038188833 0.0 8 3.110751784716068E-5 0.0 0.0 0.8755210898083372 0.0 9 3.110751784716068E-5 0.0 0.0 1.0280723573308133 0.0 10 6.221503569432136E-5 0.0 0.0 1.2497445295096803 0.0 11 9.332255354148203E-5 0.0 0.0 1.4286438646487012 0.0 12 1.2443007138864272E-4 0.0 0.0 1.5841192388488103 0.0 13 1.5553758923580338E-4 0.0 0.0 1.6518403052020791 0.0 14 1.5553758923580338E-4 0.0 0.0 1.6813613396390346 0.0 15 1.8664510708296406E-4 0.0 0.0 1.7163261896992432 0.0 16 1.8664510708296406E-4 0.0 0.0 1.7934728339602017 0.0 17 1.8664510708296406E-4 0.0 0.0 1.883591313163426 0.0 18 1.8664510708296406E-4 0.0 0.0 2.025472702064326 0.0 19 1.8664510708296406E-4 0.0 0.0 2.0867234047053853 0.0 20 2.1775262493012475E-4 0.0 0.0 2.1578351905039947 0.0 21 2.1775262493012475E-4 0.0 0.0 2.2510022064562407 0.0 22 2.1775262493012475E-4 0.0 0.0 2.3455379531937623 0.0 23 2.4886014277728544E-4 0.0 0.0 2.4606046617104096 0.0 24 3.7329021416592813E-4 0.0 0.0 2.553989430287586 0.0 25 3.7329021416592813E-4 0.0 0.0 2.630731676816531 0.0 26 3.7329021416592813E-4 0.0 0.0 2.7108957503086644 0.0 27 3.7329021416592813E-4 0.0 0.0 2.7935795327464175 0.0 28 3.7329021416592813E-4 0.0 0.0 2.880587260164926 0.0 29 3.7329021416592813E-4 0.0 0.0 2.9880015192911715 0.0 30 4.043977320130888E-4 0.0 0.0 3.1357622290651848 0.0 31 4.043977320130888E-4 0.0 0.0 3.2531620014203693 0.0 32 4.043977320130888E-4 0.0 0.0 3.367482129508685 0.0 33 4.355052498602495E-4 0.0 0.0 3.4814600749006814 0.0 34 4.355052498602495E-4 0.0 0.0 3.6052368884145336 0.0 35 4.977202855545709E-4 0.0 0.0 3.761334412971586 0.0 36 4.977202855545709E-4 0.0 0.0 3.8818760446293337 0.0 37 4.977202855545709E-4 0.0 0.0 4.00758152424971 0.0 38 5.288278034017315E-4 0.0 0.0 4.1640834465387755 0.0 39 5.599353212488922E-4 0.0 0.0 4.445419837948497 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAA 35 1.2128476E-7 45.0 18 ACGTTAC 25 3.892376E-5 45.0 31 CGCGAAA 20 7.0351816E-4 45.0 30 CGTTAGG 615 0.0 41.707317 2 CGGTCTA 245 0.0 40.408165 31 ACGTTAG 145 0.0 40.344826 1 CGTTTTT 11485 0.0 40.10231 1 GGGCGAT 5450 0.0 40.00459 7 TAGTAGG 1335 0.0 38.932583 2 ACGGGAT 715 0.0 38.706295 5 CGTAAGT 105 0.0 38.57143 37 TAATGCG 105 0.0 38.57143 1 TTACGTA 35 6.2517956E-6 38.571426 24 ACGGTAC 35 6.2517956E-6 38.571426 15 ATAGGGC 1150 0.0 38.543476 4 TGGGCGA 1850 0.0 38.43243 6 CATATGC 1675 0.0 38.417908 33 AGGGCGA 2560 0.0 38.23242 6 TCGTTAG 165 0.0 38.181816 1 ACATACG 1055 0.0 38.175354 17 >>END_MODULE