##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545253_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2637256 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.266779940968945 31.0 31.0 34.0 30.0 34.0 2 31.518365300903668 31.0 31.0 34.0 30.0 34.0 3 31.60527646917857 31.0 31.0 34.0 30.0 34.0 4 35.34520691203281 37.0 35.0 37.0 33.0 37.0 5 35.190826753261724 37.0 35.0 37.0 32.0 37.0 6 35.17884725639073 37.0 35.0 37.0 32.0 37.0 7 35.84012170225416 37.0 35.0 37.0 35.0 37.0 8 35.969153544441646 37.0 35.0 37.0 35.0 37.0 9 37.669258502018764 39.0 37.0 39.0 35.0 39.0 10 36.9060534889294 39.0 37.0 39.0 32.0 39.0 11 36.49397441886567 39.0 35.0 39.0 32.0 39.0 12 35.02229438476962 35.0 34.0 39.0 30.0 39.0 13 34.278093973432995 35.0 33.0 39.0 25.0 39.0 14 34.92084310358949 35.0 33.0 40.0 25.0 41.0 15 35.58149531179377 35.0 33.0 40.0 30.0 41.0 16 35.6776130189864 35.0 34.0 40.0 31.0 41.0 17 35.797256694078996 35.0 34.0 40.0 31.0 41.0 18 35.93676457651438 36.0 35.0 40.0 31.0 41.0 19 35.82795071847405 36.0 35.0 40.0 31.0 41.0 20 35.6200990726725 35.0 34.0 40.0 31.0 41.0 21 35.45354148402734 35.0 34.0 40.0 30.0 41.0 22 35.321310483320545 35.0 34.0 40.0 30.0 41.0 23 35.32138935317618 35.0 34.0 40.0 30.0 41.0 24 35.15297415192154 35.0 34.0 40.0 30.0 41.0 25 35.15268180260089 35.0 34.0 39.0 30.0 41.0 26 35.0294207312449 35.0 34.0 39.0 29.0 41.0 27 34.9571209620909 35.0 34.0 39.0 29.0 41.0 28 35.107770728363114 35.0 34.0 39.0 29.0 41.0 29 35.16614428026706 36.0 34.0 39.0 30.0 41.0 30 35.100171162754016 36.0 34.0 39.0 29.0 41.0 31 34.89134539839894 35.0 34.0 39.0 29.0 41.0 32 34.70716039701872 35.0 34.0 39.0 29.0 41.0 33 34.51068041934496 35.0 33.0 39.0 27.0 41.0 34 34.410597605996536 35.0 34.0 39.0 27.0 41.0 35 34.237920778263465 35.0 33.0 39.0 27.0 41.0 36 33.93838368364694 35.0 33.0 39.0 24.0 41.0 37 33.76860494392657 35.0 33.0 39.0 24.0 41.0 38 33.936620866537034 35.0 33.0 39.0 25.0 41.0 39 33.999260215921396 35.0 33.0 39.0 25.0 41.0 40 33.792098681356684 35.0 33.0 39.0 23.0 41.0 41 33.88302652453914 35.0 33.0 39.0 24.0 41.0 42 33.82087556156854 35.0 33.0 39.0 24.0 41.0 43 33.69879526295513 35.0 33.0 39.0 24.0 41.0 44 33.66775883721565 35.0 33.0 38.0 24.0 41.0 45 33.588472639743735 35.0 33.0 38.0 23.0 41.0 46 33.55447480259785 35.0 33.0 38.0 23.0 41.0 47 33.58378215842527 35.0 33.0 38.0 24.0 40.0 48 33.64386961296135 35.0 33.0 38.0 24.0 41.0 49 33.69238329536458 35.0 33.0 38.0 24.0 40.0 50 33.44872549346745 35.0 33.0 38.0 24.0 40.0 51 33.242196813657834 35.0 32.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 3.0 14 20.0 15 78.0 16 247.0 17 669.0 18 1592.0 19 3008.0 20 5256.0 21 8457.0 22 12729.0 23 17947.0 24 25698.0 25 35649.0 26 45687.0 27 53570.0 28 61110.0 29 70555.0 30 85667.0 31 107377.0 32 137562.0 33 183524.0 34 329686.0 35 517737.0 36 156718.0 37 173321.0 38 234721.0 39 368284.0 40 382.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.121838759680514 25.112237871484606 30.15069450974801 14.615228859086868 2 28.2437503223047 28.253154035861517 30.963054022817655 12.54004161901613 3 26.74491971958733 26.469709425251093 33.24129322295598 13.544077632205594 4 24.13755054496037 29.371703012525142 32.02176808015604 14.46897836235845 5 21.506179149843625 33.765664008348075 30.27358739538369 14.454569446424617 6 19.84763708945965 40.55317344997983 28.423710098678324 11.175479361882198 7 86.42585323533248 5.6847344360957 6.199398162332364 1.690014166239455 8 89.3717560980049 3.9454266100826008 5.261415653239579 1.4214016386729236 9 86.19212545160576 5.027725787712684 6.591396512132307 2.1887522485492497 10 60.90523635172316 20.095394607121946 11.705234531649563 7.2941345095053345 11 56.305758712843954 16.23524602844775 17.36964481263859 10.089350446069703 12 51.62236809775008 20.336402685215237 19.122754863388312 8.918474353646367 13 18.792714852103853 54.5468850957207 17.225100634902336 9.435299417273106 14 10.888969443997851 53.433189648634794 23.439476486165926 12.238364421201432 15 8.230372781406128 22.781481964587435 57.09726321600937 11.89088203799707 16 9.298490552301333 16.037085516157703 54.5005869737333 20.16383695780766 17 9.544010896173901 16.78547702612109 28.64405275786651 45.026459319838494 18 16.55781615436651 21.708358991315215 42.037064281965804 19.696760572352474 19 31.607435910658655 22.97994582247609 24.513547414433788 20.899070852431468 20 33.87335169585357 21.338618624813062 26.03418098205104 18.753848697282326 21 17.66119785109978 33.857501888326354 27.734963917041043 20.746336343532825 22 19.54349520865627 26.19586418610859 19.8918117922568 34.368828812978336 23 13.752703567647584 35.907170179914274 22.967281143734244 27.372845108703896 24 14.00914435307001 21.968174496522142 50.89077435030956 13.131906800098283 25 10.998856387093252 26.749431985366606 43.970134109089145 18.281577518450995 26 11.616619698656482 41.74672462589904 26.505049187488815 20.131606487955665 27 11.024944108573456 45.86103889800611 25.79897438853111 17.315042604889324 28 9.227431845827633 31.925455852598304 43.232245940477526 15.614866361096533 29 9.205098026130191 23.914477775384718 42.8917025878413 23.98872161064379 30 13.839498327049023 39.883348450055664 30.761253363344327 15.515899859550988 31 31.65327901424814 30.40743864076904 22.775301298015815 15.163981046966999 32 34.25204075751463 24.827396354392594 25.2974303594342 15.623132528658576 33 32.57878643559821 28.186190494969015 20.90346936361127 18.331553705821506 34 16.346801372335488 25.281011778909594 26.830235669195556 31.54195117955936 35 17.039036028356747 24.157647190868083 35.30772135886694 23.495595421908224 36 35.328652205170826 24.55726709883303 23.790257752755135 16.323822943241005 37 15.936185186421037 39.947581880560705 28.99236934146704 15.123863591551217 38 15.482456007304563 39.468409589361066 24.559352599823452 20.489781803510922 39 16.53752991745966 39.932793782628615 25.827299283801043 17.702377016110685 40 26.650275892821934 24.447721419536066 24.961968045574643 23.940034642067364 41 13.58802482580379 22.658892424550366 27.644491092256494 36.10859165738935 42 16.88531564626263 22.804498311881744 24.914684050391774 35.39550199146386 43 17.2385236776407 23.372020008675683 28.4484327649648 30.94102354871882 44 14.082326478733956 29.642211450082968 33.190331162389995 23.08513090879308 45 11.614837543264667 47.79892433650733 20.81151772903351 19.774720391194485 46 18.869954225149172 40.69517710832775 23.744111303567042 16.69075736295604 47 16.68165699499783 29.964667821402248 26.28599574709471 27.067679436505216 48 17.86409813836806 24.414087976290507 37.415101150589855 20.306712734751574 49 18.997511049363432 24.390654528798112 38.29658554194208 18.315248879896377 50 17.160260513200086 40.23469848964226 25.754761767534134 16.850279229623517 51 14.252389604953027 38.572516282075 24.034754305232408 23.14033980773956 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 15435.0 1 12033.0 2 8631.0 3 13269.0 4 17907.0 5 12774.0 6 7641.0 7 8312.5 8 8984.0 9 10523.0 10 12062.0 11 12826.0 12 13590.0 13 13532.5 14 13475.0 15 12656.0 16 11837.0 17 11193.5 18 10550.0 19 9402.0 20 8254.0 21 8298.5 22 8343.0 23 9077.0 24 9811.0 25 10774.0 26 14249.0 27 16761.0 28 21795.5 29 26830.0 30 36141.5 31 45453.0 32 55542.0 33 65631.0 34 75296.0 35 84961.0 36 89689.5 37 94418.0 38 112224.0 39 130030.0 40 187887.0 41 245744.0 42 312677.0 43 379610.0 44 369328.0 45 359046.0 46 322923.0 47 286800.0 48 252774.5 49 218749.0 50 192075.5 51 165402.0 52 139662.5 53 113923.0 54 91686.0 55 69449.0 56 58243.0 57 47037.0 58 40213.0 59 33389.0 60 30288.0 61 27187.0 62 24706.0 63 22225.0 64 18628.5 65 15032.0 66 13029.0 67 11026.0 68 9164.0 69 7302.0 70 6198.0 71 5094.0 72 4496.5 73 3899.0 74 3070.5 75 1521.0 76 800.0 77 668.5 78 537.0 79 430.5 80 324.0 81 194.0 82 64.0 83 45.0 84 26.0 85 15.5 86 5.0 87 3.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2637256.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.849449640371532 #Duplication Level Percentage of deduplicated Percentage of total 1 78.0189986073492 11.585391908120485 2 9.374058398442628 2.7839921622715122 3 3.6331917362066806 1.6185269316184532 4 1.7606194262409125 1.0457691802329698 5 1.067618643182754 0.7926774638532044 6 0.6771084509942012 0.6032812706465019 7 0.47956771028284173 0.49849215940953395 8 0.34420371537254835 0.4088988589962746 9 0.24879647148027734 0.3325041606553659 >10 2.074633748083102 6.829391526546321 >50 0.754307775241412 8.186277377170722 >100 1.4213093526386311 49.448932104034604 >500 0.13213508733128956 11.972303087195012 >1k 0.012395906396348523 2.242745805571004 >5k 2.6374268928401113E-4 0.23580847804667796 >10k+ 7.912280678520334E-4 1.4150075256313694 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 14186 0.5379075827299283 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 11101 0.42092993626708974 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10843 0.4111470407120128 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 6021 0.22830548115162125 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4325 0.16399621424692937 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.045994776388791986 0.0 2 0.0 0.0 0.0 0.20217984147159015 0.0 3 0.0 0.0 0.0 0.2934110302526565 0.0 4 0.0 0.0 0.0 0.3900645216088237 0.0 5 0.0 0.0 0.0 0.6950026846085476 0.0 6 0.0 0.0 0.0 0.9451490488598756 0.0 7 0.0 0.0 0.0 1.109410690505586 0.0 8 0.0 0.0 0.0 1.4965175925279912 0.0 9 0.0 0.0 0.0 1.6652914999529815 0.0 10 3.7918199825879624E-5 0.0 0.0 1.9641627509805646 0.0 11 7.583639965175925E-5 0.0 0.0 2.2940131712658913 0.0 12 7.583639965175925E-5 0.0 0.0 2.5716502303909823 0.0 13 7.583639965175925E-5 0.0 0.0 2.677176580506405 0.0 14 7.583639965175925E-5 0.0 0.0 2.712402588144647 0.0 15 7.583639965175925E-5 0.0 0.0 2.7727683622674477 0.0 16 7.583639965175925E-5 0.0 0.0 2.921597296584025 0.0 17 7.583639965175925E-5 0.0 0.0 3.098296107772624 0.0 18 7.583639965175925E-5 0.0 0.0 3.4133205119260324 0.0 19 1.1375459947763888E-4 0.0 0.0 3.5158513242552107 0.0 20 1.1375459947763888E-4 0.0 0.0 3.6326014615190942 0.0 21 1.1375459947763888E-4 0.0 0.0 3.7890519540006733 0.0 22 1.1375459947763888E-4 0.0 0.0 3.9436065364909587 0.0 23 1.516727993035185E-4 0.0 0.0 4.143132103974738 0.0 24 4.5501839791055554E-4 0.0 0.0 4.2783484045538245 0.0 25 4.5501839791055554E-4 0.0 0.0 4.387021965254795 0.0 26 4.929365977364351E-4 0.0 0.0 4.499676936937483 0.0 27 4.929365977364351E-4 0.0 0.0 4.61161146282348 0.0 28 4.929365977364351E-4 0.0 0.0 4.720512532723406 0.0 29 4.929365977364351E-4 0.0 0.0 4.837907279384329 0.0 30 5.308547975623148E-4 0.0 0.0 5.034209799882909 0.0 31 5.308547975623148E-4 0.0 0.0 5.1886506277737166 0.0 32 5.308547975623148E-4 0.0 0.0 5.31597994278902 0.0 33 5.308547975623148E-4 0.0 0.0 5.440465392817383 0.0 34 5.308547975623148E-4 0.0 0.0 5.579852695377316 0.0 35 5.308547975623148E-4 0.0 0.0 5.812063751111003 0.0 36 5.308547975623148E-4 0.0 0.0 5.958807184437157 0.0 37 5.308547975623148E-4 0.0 0.0 6.10354095317254 0.0 38 5.308547975623148E-4 0.0 0.0 6.232993687378093 0.0 39 5.687729973881944E-4 0.0 0.0 6.375717791522704 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATGT 30 2.1665746E-6 45.000004 34 GCGATAC 95 0.0 45.000004 9 ACGTCCA 30 2.1665746E-6 45.000004 26 AATCCCG 25 3.892184E-5 45.0 28 GTACCAG 25 3.892184E-5 45.0 1 GTCGACG 90 0.0 45.0 1 TCCGATC 25 3.892184E-5 45.0 14 ACGTTAG 90 0.0 45.0 1 GTTTAGT 20 7.0349505E-4 45.0 44 AACCACG 35 1.2127202E-7 45.0 1 ACCGACA 25 3.892184E-5 45.0 27 CGATTCG 80 0.0 45.0 10 CGCGAAA 20 7.0349505E-4 45.0 26 CGTTCGA 25 3.892184E-5 45.0 14 CCTCGAC 45 3.8562575E-10 45.0 30 ACTAGTC 25 3.892184E-5 45.0 10 ATATCGA 20 7.0349505E-4 45.0 14 CCACTAG 35 1.2127202E-7 45.0 26 TGCGCAC 25 3.892184E-5 45.0 11 CGTAGAA 45 3.8562575E-10 45.0 34 >>END_MODULE