##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545251_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3399823 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24602163112609 31.0 31.0 34.0 30.0 34.0 2 31.492957133356647 31.0 31.0 34.0 30.0 34.0 3 31.567243647684013 31.0 31.0 34.0 30.0 34.0 4 35.30802132934568 37.0 35.0 37.0 33.0 37.0 5 35.15879032526105 37.0 35.0 37.0 32.0 37.0 6 35.14332893212382 37.0 35.0 37.0 32.0 37.0 7 35.84491810308948 37.0 35.0 37.0 35.0 37.0 8 35.97169529119604 37.0 35.0 37.0 35.0 37.0 9 37.669677509682124 39.0 37.0 39.0 35.0 39.0 10 36.8691128920535 39.0 37.0 39.0 32.0 39.0 11 36.42133281644368 38.0 35.0 39.0 32.0 39.0 12 35.022311161492816 35.0 34.0 39.0 30.0 39.0 13 34.299677659689934 35.0 33.0 39.0 25.0 39.0 14 34.94457093795765 35.0 33.0 40.0 25.0 41.0 15 35.58452866516875 35.0 33.0 40.0 30.0 41.0 16 35.66397074200628 35.0 34.0 40.0 31.0 41.0 17 35.782846930560794 35.0 34.0 40.0 31.0 41.0 18 35.89644902102256 36.0 35.0 40.0 31.0 41.0 19 35.80007341558664 36.0 35.0 40.0 31.0 41.0 20 35.59365472849616 35.0 34.0 40.0 31.0 41.0 21 35.41621666775006 35.0 34.0 40.0 30.0 41.0 22 35.30261457728829 35.0 34.0 40.0 30.0 41.0 23 35.29956206543694 35.0 34.0 40.0 30.0 41.0 24 35.14796829129046 35.0 34.0 39.0 30.0 41.0 25 35.16826434787929 35.0 34.0 39.0 30.0 41.0 26 35.03668926294104 35.0 34.0 39.0 29.0 41.0 27 34.929605747122714 35.0 34.0 39.0 29.0 41.0 28 35.067263501658765 35.0 34.0 39.0 29.0 41.0 29 35.118427635791626 36.0 34.0 39.0 29.0 41.0 30 35.06017725040392 36.0 34.0 39.0 29.0 41.0 31 34.864280287532615 35.0 34.0 39.0 29.0 41.0 32 34.65231895895757 35.0 34.0 39.0 29.0 41.0 33 34.44116679015349 35.0 33.0 39.0 27.0 41.0 34 34.322640031554585 35.0 34.0 39.0 27.0 41.0 35 34.12728427332835 35.0 33.0 39.0 26.0 41.0 36 33.84444484315801 35.0 33.0 39.0 24.0 41.0 37 33.6731241596989 35.0 33.0 39.0 23.0 41.0 38 33.83181771521635 35.0 33.0 39.0 24.0 41.0 39 33.86450765231014 35.0 33.0 39.0 24.0 41.0 40 33.679277127073966 35.0 33.0 39.0 23.0 41.0 41 33.7933886558212 35.0 33.0 39.0 24.0 41.0 42 33.74812218165475 35.0 33.0 39.0 24.0 41.0 43 33.59438829609659 35.0 33.0 39.0 23.0 41.0 44 33.57647177514829 35.0 33.0 38.0 23.0 41.0 45 33.50057547113482 35.0 33.0 38.0 23.0 40.0 46 33.47994792670089 35.0 33.0 38.0 23.0 40.0 47 33.51805255744196 35.0 33.0 38.0 23.0 40.0 48 33.57284099789901 35.0 33.0 38.0 23.0 40.0 49 33.61510996307749 35.0 33.0 38.0 24.0 40.0 50 33.343575827329836 35.0 33.0 38.0 24.0 40.0 51 33.147666216741285 35.0 32.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 3.0 12 3.0 13 9.0 14 26.0 15 85.0 16 245.0 17 811.0 18 1926.0 19 3760.0 20 6603.0 21 10844.0 22 16315.0 23 24062.0 24 34487.0 25 47539.0 26 61095.0 27 71900.0 28 80083.0 29 93343.0 30 112029.0 31 140190.0 32 178359.0 33 236576.0 34 423520.0 35 658884.0 36 201958.0 37 229660.0 38 308074.0 39 457035.0 40 398.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.080036519548226 25.80957891043151 30.159128872297174 13.951255697723086 2 28.88579787830131 27.091351520358558 31.43257751947675 12.59027308186338 3 26.62476840706119 26.442611865382403 33.42715194290997 13.505467784646436 4 24.36468016129075 28.374918341337178 33.16816787226865 14.092233625103425 5 22.789656990966883 32.85229848730361 30.758748323074464 13.599296198655047 6 20.17516794256642 40.98822203391176 28.38121278666566 10.455397236856154 7 86.2290772196082 5.432635757802686 6.646551894025071 1.691735128564046 8 89.16020039866781 3.249227974515144 6.058109495700218 1.5324621311168258 9 86.02306649493224 4.572002718965075 7.3612655717665305 2.043665214336158 10 61.90422266100324 20.39035561557175 10.836181765933109 6.869239957491905 11 56.99249637407594 15.916652131596262 18.023085319441627 9.067766174886163 12 50.916327114676264 20.396002968389826 19.576725023626228 9.11094489330768 13 18.423459103606277 53.266331806096964 19.439864957675738 8.870344132621021 14 10.687732861387197 53.12241254912388 25.31752388286096 10.872330706627963 15 8.440968838671896 22.868719930419907 58.72561601000993 9.964695220898264 16 10.098437477480445 16.21063802439127 55.88605642117251 17.80486807695577 17 10.590874877898056 16.077542860319493 29.875143500117506 43.45643876166495 18 17.034092657176565 21.84622552409346 42.74957843393612 18.370103384793858 19 32.12781959531423 21.734807959120225 25.85322824158787 20.28414420397768 20 33.52780424157375 21.380171850122785 27.306480366772035 17.785543541531425 21 18.243302666050557 33.21990585980505 29.603452885635516 18.93333858850887 22 20.104928991891637 24.972711814703295 22.90325113983875 32.01910805356632 23 14.113470024763053 35.346928354799644 24.361709418402075 26.177892202035224 24 13.83613205746299 22.42752049150794 49.55481505948986 14.181532391539205 25 11.22361369988967 25.661188832477457 45.333389414684234 17.781808052948637 26 11.218378133214582 41.18493815707465 28.42892115266001 19.167762557050764 27 12.338230549060937 45.35080208587329 27.919806413451525 14.391160951614246 28 9.94407650045311 32.75535226392668 43.65174304662331 13.648828188996898 29 10.025933703019245 25.300522997814884 42.76590281317586 21.907640485990008 30 14.393131642441388 39.224424330325434 31.344014085439152 15.038429941794028 31 32.19123466133384 29.36041082138688 24.106254943272045 14.342099574007236 32 34.46388238446531 24.705903807345265 27.36345392098353 13.466759887205892 33 32.89306531545907 27.370483698710196 22.688651732751968 17.047799253078765 34 18.33986651658042 25.98649988543521 27.009759037455773 28.66387456052859 35 18.097942157577027 24.77511329266259 35.08150277235021 22.045441777410176 36 36.18326601120117 24.55177813668535 24.678049416101956 14.586906436011521 37 17.195630478410198 39.035061531144414 29.817169893844476 13.95213809660091 38 16.570039087328958 40.12708896904339 23.81041601283361 19.492455930794044 39 18.029791550913092 38.39370461344605 27.188150677255845 16.388353158385012 40 26.962844830451466 24.507746432681937 24.83288100586413 23.69652773100247 41 13.74392137473039 23.806798177434533 27.624202789380508 34.825077658454575 42 17.727834654921743 23.347450734935318 25.629304819692084 33.29540979045086 43 18.202977037334005 23.342715194290996 28.391448613648418 30.062859154726585 44 14.844508081744257 30.23007374207422 33.61842660632627 21.306991569855256 45 12.736398336031025 47.07062691204807 21.926229689016164 18.266745062904747 46 20.13622473875846 39.515410066935836 24.553278214777652 15.795086979528053 47 17.53923660143484 29.494682517295757 26.21121746632104 26.754863414948364 48 20.052749804916314 24.793702495688745 36.746677694691755 18.406870004703187 49 20.725931908808192 23.34462705852628 37.880707319175144 18.04873371349038 50 18.145268150724316 40.73988557639618 25.108307108928905 16.006539163950595 51 15.314326657593647 39.29010422013146 23.798827174238188 21.59674194803671 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 15005.0 1 12351.5 2 9698.0 3 18035.0 4 26372.0 5 18681.0 6 10990.0 7 11991.0 8 12992.0 9 14734.0 10 16476.0 11 18293.5 12 20111.0 13 19542.5 14 18974.0 15 17912.0 16 16850.0 17 15630.5 18 14411.0 19 13158.5 20 11906.0 21 13275.0 22 14644.0 23 15226.5 24 15809.0 25 18865.0 26 24297.0 27 26673.0 28 35631.5 29 44590.0 30 50328.0 31 56066.0 32 64877.0 33 73688.0 34 87957.5 35 102227.0 36 112520.5 37 122814.0 38 150396.5 39 177979.0 40 252822.5 41 327666.0 42 405957.0 43 484248.0 44 485680.0 45 487112.0 46 448598.5 47 410085.0 48 340272.5 49 270460.0 50 225952.5 51 181445.0 52 156979.0 53 132513.0 54 109796.0 55 87079.0 56 71281.0 57 55483.0 58 47867.0 59 40251.0 60 35647.0 61 31043.0 62 27032.0 63 23021.0 64 18459.5 65 13898.0 66 11105.5 67 8313.0 68 6949.0 69 5585.0 70 4746.5 71 3908.0 72 3664.0 73 3420.0 74 2665.5 75 1467.0 76 1023.0 77 877.5 78 732.0 79 457.5 80 183.0 81 153.5 82 124.0 83 113.5 84 103.0 85 59.0 86 15.0 87 8.5 88 2.0 89 2.0 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3399823.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.882313738422054 #Duplication Level Percentage of deduplicated Percentage of total 1 76.52698518344924 11.388986029556678 2 9.74728742715035 2.901243791788564 3 3.8026659711451036 1.6977740407500843 4 2.022380611020506 1.2039081100683544 5 1.277133215864413 0.9503348602127047 6 0.8370833891198337 0.7474642573261797 7 0.5864850905531668 0.6109778584363368 8 0.42634553857449325 0.5076006452833705 9 0.3351514695147825 0.44890463872909686 >10 2.375132821174349 7.514777532626014 >50 0.6387867111790028 6.918819969257307 >100 1.1733983404768746 38.53468793087046 >500 0.23271134851665723 21.645581646494556 >1k 0.01783778618585831 3.6754132153756918 >5k 2.0503202512480814E-4 0.297384661085341 >10k+ 4.100640502496163E-4 0.9561408121392531 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17655 0.519291739599385 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 13680 0.4023738882877138 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 9746 0.2866619821090686 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4860 0.14294861820747728 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3994 0.11747670393429306 No Hit AGGAAGGGATAGCCTTCTGTAATTCCATTCCCCAAAATTTGACTCCCTTTT 3694 0.10865271515605371 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.050237909444109295 0.0 2 0.0 0.0 0.0 0.1933335941312239 0.0 3 0.0 0.0 0.0 0.2833382796692651 0.0 4 0.0 0.0 0.0 0.4052269779926779 0.0 5 0.0 0.0 0.0 0.7503625924055458 0.0 6 0.0 0.0 0.0 1.023759178051328 0.0 7 0.0 0.0 0.0 1.2217106596431637 0.0 8 0.0 0.0 0.0 1.6807639691831016 0.0 9 0.0 0.0 0.0 1.8647735485053192 0.0 10 2.941329592746446E-5 0.0 0.0 2.198290911026839 0.0 11 2.941329592746446E-5 0.0 0.0 2.541720554275914 0.0 12 2.941329592746446E-5 0.0 0.0 2.844501022553233 0.0 13 2.941329592746446E-5 0.0 0.0 2.959124636782562 0.0 14 2.941329592746446E-5 0.0 0.0 2.9949500312222135 0.0 15 2.941329592746446E-5 0.0 0.0 3.0551590479857333 0.0 16 2.941329592746446E-5 0.0 0.0 3.212520181197668 0.0 17 2.941329592746446E-5 0.0 0.0 3.406442041247441 0.0 18 2.941329592746446E-5 0.0 0.0 3.715075755414326 0.0 19 2.941329592746446E-5 0.0 0.0 3.8432294857702884 0.0 20 5.882659185492892E-5 0.0 0.0 3.976177583362428 0.0 21 5.882659185492892E-5 0.0 0.0 4.157275246387827 0.0 22 5.882659185492892E-5 0.0 0.0 4.339314134882904 0.0 23 8.823988778239338E-5 0.0 0.0 4.562178678125302 0.0 24 8.823988778239338E-5 0.0 0.0 4.716686721632273 0.0 25 8.823988778239338E-5 0.0 0.0 4.843928639814484 0.0 26 8.823988778239338E-5 0.0 0.0 4.982641743408407 0.0 27 8.823988778239338E-5 0.0 0.0 5.111942592305541 0.0 28 8.823988778239338E-5 0.0 0.0 5.240861068355617 0.0 29 8.823988778239338E-5 0.0 0.0 5.385398004543178 0.0 30 8.823988778239338E-5 0.0 0.0 5.602056342344881 0.0 31 1.470664796373223E-4 0.0 0.0 5.7978900666299396 0.0 32 1.470664796373223E-4 0.0 0.0 5.9595749543432115 0.0 33 1.470664796373223E-4 0.0 0.0 6.117730246545188 0.0 34 1.470664796373223E-4 0.0 0.0 6.292533464242109 0.0 35 1.470664796373223E-4 0.0 0.0 6.55690016803816 0.0 36 1.470664796373223E-4 0.0 0.0 6.749439603179342 0.0 37 1.470664796373223E-4 0.0 0.0 6.929801933806554 0.0 38 1.470664796373223E-4 0.0 0.0 7.11510569814958 0.0 39 1.470664796373223E-4 0.0 0.0 7.302880179350513 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCGT 20 7.0352375E-4 45.000004 18 CTACGGC 20 7.0352375E-4 45.000004 12 GCTTACG 40 6.8212103E-9 45.000004 1 AGGTGCG 20 7.0352375E-4 45.000004 1 CCGGATG 25 3.892424E-5 45.0 23 CGCGATA 35 1.2128658E-7 45.0 11 TAAGTCG 90 0.0 45.0 1 GTGTCGC 25 3.892424E-5 45.0 45 ACCGTAG 55 1.8189894E-12 45.0 2 GAACCGT 25 3.892424E-5 45.0 45 CGCAATA 25 3.892424E-5 45.0 41 ATACGGT 55 1.8189894E-12 45.0 29 TACCGGA 35 1.2128658E-7 45.0 22 TCACGTA 25 3.892424E-5 45.0 41 CGCTGTA 30 2.166762E-6 44.999996 16 CCGTCAC 30 2.166762E-6 44.999996 29 GCGTGCC 30 2.166762E-6 44.999996 35 ACGCGAG 335 0.0 42.985077 1 TATTACG 105 0.0 42.857143 1 GACAGCG 100 0.0 42.75 1 >>END_MODULE