##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545250_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1440659 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.20562673054484 31.0 31.0 33.0 30.0 34.0 2 31.46181712674547 31.0 31.0 34.0 30.0 34.0 3 31.549752578507476 31.0 31.0 34.0 30.0 34.0 4 35.312550714638235 37.0 35.0 37.0 33.0 37.0 5 35.1622174296624 37.0 35.0 37.0 32.0 37.0 6 35.15416417070244 37.0 35.0 37.0 32.0 37.0 7 35.82506894414292 37.0 35.0 37.0 35.0 37.0 8 35.90992039059903 37.0 35.0 37.0 35.0 37.0 9 37.530989637381225 39.0 37.0 39.0 35.0 39.0 10 36.75979881429262 39.0 37.0 39.0 32.0 39.0 11 36.40339386350274 38.0 35.0 39.0 32.0 39.0 12 35.455140321200226 37.0 35.0 39.0 30.0 39.0 13 35.0035761411965 37.0 34.0 39.0 29.0 39.0 14 35.77112279866367 38.0 34.0 40.0 27.0 41.0 15 36.206482588870784 38.0 35.0 40.0 30.0 41.0 16 36.15280784696448 38.0 35.0 40.0 31.0 41.0 17 36.23026753728676 37.0 34.0 40.0 31.0 41.0 18 36.285338168157764 37.0 35.0 40.0 31.0 41.0 19 36.21933018153498 37.0 35.0 40.0 31.0 41.0 20 36.07248071889323 37.0 34.0 40.0 31.0 41.0 21 35.948556875707574 37.0 34.0 40.0 30.0 41.0 22 35.81921606709152 36.0 34.0 40.0 30.0 41.0 23 35.78274248104513 36.0 34.0 40.0 30.0 41.0 24 35.57950077013367 36.0 34.0 40.0 30.0 41.0 25 35.56739103424197 36.0 34.0 40.0 30.0 41.0 26 35.40714284226871 36.0 34.0 40.0 29.0 41.0 27 35.35683045050911 36.0 34.0 40.0 29.0 41.0 28 35.369725937921466 36.0 34.0 40.0 29.0 41.0 29 35.39315549342349 36.0 34.0 40.0 29.0 41.0 30 35.313590516562215 36.0 34.0 40.0 29.0 41.0 31 35.19371967967437 36.0 34.0 40.0 29.0 41.0 32 35.03222275361484 35.0 34.0 40.0 29.0 41.0 33 34.84955634886535 35.0 34.0 40.0 27.0 41.0 34 34.6850732893766 35.0 34.0 40.0 26.0 41.0 35 34.51598053390844 35.0 33.0 40.0 26.0 41.0 36 34.30173552520062 35.0 33.0 40.0 24.0 41.0 37 34.076175555769964 35.0 33.0 40.0 23.0 41.0 38 34.1617676355057 35.0 33.0 40.0 24.0 41.0 39 34.17694610591403 35.0 33.0 40.0 24.0 41.0 40 33.97795939219482 35.0 33.0 40.0 23.0 41.0 41 33.998431273465826 35.0 33.0 40.0 23.0 41.0 42 33.94269497500797 35.0 33.0 40.0 23.0 41.0 43 33.798864963881115 35.0 33.0 39.0 23.0 41.0 44 33.741087932675256 35.0 33.0 39.0 23.0 41.0 45 33.68199691946533 35.0 33.0 39.0 23.0 41.0 46 33.599407632201654 35.0 33.0 39.0 23.0 41.0 47 33.63180947052703 35.0 33.0 39.0 23.0 41.0 48 33.58535642369221 35.0 33.0 39.0 23.0 41.0 49 33.56496575525506 35.0 33.0 39.0 24.0 41.0 50 33.35318003774661 35.0 32.0 39.0 23.0 40.0 51 33.204103122251695 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 1.0 14 15.0 15 50.0 16 140.0 17 390.0 18 889.0 19 1759.0 20 2984.0 21 4892.0 22 7134.0 23 10096.0 24 14346.0 25 19483.0 26 25223.0 27 29988.0 28 33767.0 29 39498.0 30 46999.0 31 57259.0 32 70727.0 33 92317.0 34 153264.0 35 215237.0 36 103138.0 37 121770.0 38 163630.0 39 225498.0 40 162.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.29830306824863 23.653550215561072 28.545616971122246 14.502529745068054 2 30.80777616354738 26.375984879142116 29.224472966885294 13.591765990425214 3 28.391381999487734 25.971170138110406 32.078028180159215 13.559419682242641 4 26.235146554458762 27.538786069430728 30.73544815254686 15.490619223563662 5 23.637446474148287 32.27745080549943 29.618806393462993 14.46629632688929 6 21.896160021212516 41.575695567098116 25.99588105165761 10.532263360031763 7 86.19124997657323 5.1703421836812185 6.7559359987339125 1.8824718410116483 8 87.73623737470145 4.0530062978123205 6.631687304212863 1.5790690232733768 9 83.00888690522879 5.66580988283834 8.236716669246505 3.0885865426863677 10 52.952711224516 22.960534033383333 13.579271708294607 10.507483033806057 11 47.22255578870503 20.97401258729512 19.216483567589552 12.586948056410296 12 42.067623219651566 22.002986133429214 23.200285424934005 12.729105221985215 13 21.582275889020234 40.817639705162705 23.45857000164508 14.141514404171978 14 15.000079824580279 43.30351596040423 26.78281258785042 14.913591627165069 15 14.14172264220749 23.869007169635562 48.27283902713966 13.716431161017283 16 16.54229071556836 18.266987538341827 46.802609083759585 18.388112662330226 17 16.277550759756473 18.737466673237734 29.60166146187266 35.383321105133135 18 20.325004043288523 24.23828261927354 35.81860801202783 19.618105325410106 19 30.77418042715174 23.36701467869912 26.472121438869294 19.38668345527984 20 32.382402775396535 22.51247519364402 26.278460065844868 18.826661965114578 21 22.5593287516338 28.98604041622618 28.67680693349363 19.777823898646382 22 22.134870222585636 25.60585121114712 24.129929428129763 28.129349138137478 23 19.815862046466233 31.038087430821587 24.951081414824746 24.19496910788743 24 18.66777634402034 24.04191415178748 40.210209355579636 17.080100148612544 25 17.67031615392678 25.63188096558589 36.62566922498662 20.072133655500714 26 16.844860581164593 34.770476566626805 27.539133132823242 20.845529719385365 27 17.963654133282063 36.812875218910236 27.427239895075793 17.79623075273191 28 15.495408698380395 30.880173587226402 37.01195078085793 16.612466933535277 29 15.788469027021662 26.3078910415303 35.92814121870616 21.975498712741878 30 18.795356847109552 32.66331588529972 30.423438162674167 18.11788910491657 31 29.437500477212165 28.22305625411704 24.53488299451848 17.804560274152315 32 31.546812951572857 25.04860622812199 27.109676890922835 16.29490392938232 33 30.09122908335699 27.318192577146988 23.55588657690682 19.034691762589205 34 20.368178729317624 27.136956073574662 27.472427548781496 25.022437648326218 35 21.672720609110137 25.4657070132488 30.945074441627064 21.916497936014004 36 32.175830644170475 26.168718621131028 24.25056866336864 17.404882071329858 37 20.808116285672043 35.214023582263394 27.554403922093982 16.423456209970578 38 20.392473166793806 35.62112894168571 23.41005053937122 20.57634735214926 39 21.895604719784487 32.97657530338547 25.62264907934494 19.505170897485108 40 24.948999034469644 25.007791573162002 26.96495145624329 23.078257936125066 41 17.481721906433098 25.481741341983078 27.70620944998088 29.33032730160295 42 20.456402243695422 25.627924442911194 25.25469247059852 28.66098084279486 43 21.04689589972367 24.972807583196303 27.7293238719225 26.25097264515753 44 18.361597019141936 30.08248308586556 30.433503001057154 21.122416893935345 45 17.27799569502568 38.75899848610948 23.575669190280284 20.387336628584556 46 21.089168220932226 34.55633845344387 25.475633026274778 18.878860299349117 47 21.603030279892742 28.786062489457947 26.37952492574579 23.23138230490352 48 22.31978559811864 25.166954844970252 32.37650269772375 20.136756859187358 49 21.708884614610398 25.722048034961777 32.89189183561134 19.677175514816483 50 19.316090761241902 35.83457292808361 26.443106939254886 18.40622937141961 51 18.73781373663025 33.7536502392308 25.059781669361037 22.44875435477792 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3394.0 1 3600.0 2 3806.0 3 7729.0 4 11652.0 5 8736.0 6 5820.0 7 5800.0 8 5780.0 9 6085.5 10 6391.0 11 6642.5 12 6894.0 13 6930.5 14 6967.0 15 6988.5 16 7010.0 17 6270.0 18 5530.0 19 5347.5 20 5165.0 21 5478.0 22 5791.0 23 6011.5 24 6232.0 25 8143.0 26 11936.0 27 13818.0 28 17301.0 29 20784.0 30 24330.0 31 27876.0 32 29990.0 33 32104.0 34 36734.5 35 41365.0 36 44858.0 37 48351.0 38 57178.5 39 66006.0 40 87570.0 41 109134.0 42 126139.0 43 143144.0 44 144784.5 45 146425.0 46 138947.5 47 131470.0 48 118433.0 49 105396.0 50 95176.5 51 84957.0 52 78231.0 53 71505.0 54 64510.5 55 57516.0 56 53293.5 57 49071.0 58 47415.0 59 45759.0 60 45740.5 61 45722.0 62 39667.0 63 33612.0 64 28013.5 65 22415.0 66 19826.5 67 17238.0 68 14600.5 69 11963.0 70 10984.5 71 10006.0 72 7901.0 73 5796.0 74 4897.5 75 3130.0 76 2261.0 77 1787.0 78 1313.0 79 1020.0 80 727.0 81 485.5 82 244.0 83 199.0 84 154.0 85 91.0 86 28.0 87 16.0 88 4.0 89 5.0 90 6.0 91 3.0 92 0.0 93 2.0 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1440659.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.226241698767655 #Duplication Level Percentage of deduplicated Percentage of total 1 78.18316726709658 15.031684706523787 2 6.908683561461122 2.656560399459089 3 2.5846948616594445 1.490819043834819 4 1.3943385762449305 1.0723156190720242 5 0.9167712393770635 0.8813032715371101 6 0.6716108599061182 0.7747531632043329 7 0.5138058064789726 0.6914988235116476 8 0.4239265618022408 0.6520411631789957 9 0.37437805970973903 0.64780947564256 >10 5.622040989608215 26.689399084475628 >50 1.4022546406895027 18.691729150399524 >100 0.997614654923591 28.936633375331848 >500 0.004475280694984329 0.5758416284753669 >1k 0.0018647002895768037 0.7716607652411778 >5k 3.729400579153607E-4 0.4359503301120945 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6080 0.42202908530054645 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3258 0.22614650656400995 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2888 0.20046381551775955 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2346 0.16284214376892797 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.024155612119176016 0.0 2 0.0 0.0 0.0 0.08308697616854509 0.0 3 0.0 0.0 0.0 0.11112969828391035 0.0 4 0.0 0.0 0.0 0.14583603753560004 0.0 5 0.0 0.0 0.0 0.2430137874403311 0.0 6 0.0 0.0 0.0 0.33692914145540337 0.0 7 0.0 0.0 0.0 0.4014135197850428 0.0 8 0.0 0.0 0.0 0.5873700854955961 0.0 9 0.0 0.0 0.0 0.6863525650414151 0.0 10 0.0 0.0 0.0 0.8803610014583604 0.0 11 0.0 0.0 0.0 1.0733976603762583 0.0 12 0.0 0.0 0.0 1.236378629502193 0.0 13 0.0 0.0 0.0 1.3056524826485656 0.0 14 0.0 0.0 0.0 1.3323069511938634 0.0 15 0.0 0.0 0.0 1.3741627963314011 0.0 16 0.0 0.0 0.0 1.4655098812418483 0.0 17 0.0 0.0 0.0 1.5677547566773262 0.0 18 0.0 0.0 0.0 1.7266403777715615 0.0 19 0.0 0.0 0.0 1.793345961813309 0.0 20 0.0 0.0 0.0 1.871851701200631 0.0 21 0.0 0.0 0.0 1.9679188482493082 0.0 22 0.0 0.0 0.0 2.0693307715427456 0.0 23 0.0 0.0 0.0 2.1820569614322336 0.0 24 0.0 0.0 0.0 2.2724322688436334 0.0 25 6.941267850337935E-5 0.0 0.0 2.348230913769324 0.0 26 6.941267850337935E-5 0.0 0.0 2.4249319235155578 0.0 27 6.941267850337935E-5 0.0 0.0 2.498648188086147 0.0 28 1.388253570067587E-4 0.0 0.0 2.58374813193129 0.0 29 1.388253570067587E-4 0.0 0.0 2.668501012383916 0.0 30 1.388253570067587E-4 0.0 0.0 2.7813660276304106 0.0 31 1.388253570067587E-4 0.0 0.0 2.8813202846752772 0.0 32 1.388253570067587E-4 0.0 0.0 2.974819162619329 0.0 33 1.388253570067587E-4 0.0 0.0 3.0786605296603846 0.0 34 1.388253570067587E-4 0.0 0.0 3.1824324840229368 0.0 35 1.388253570067587E-4 0.0 0.0 3.321049602994185 0.0 36 2.0823803551013806E-4 0.0 0.0 3.4382182043078897 0.0 37 2.0823803551013806E-4 0.0 0.0 3.5514302829469013 0.0 38 2.0823803551013806E-4 0.0 0.0 3.6667247419410143 0.0 39 2.0823803551013806E-4 0.0 0.0 3.7887522307499553 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTA 25 3.8912993E-5 45.0 26 CGTAGGA 20 7.0338824E-4 45.0 35 TATTCGA 20 7.0338824E-4 45.0 38 ACGTCCA 25 3.8912993E-5 45.0 12 TCATACG 25 3.8912993E-5 45.0 1 TTATTCG 20 7.0338824E-4 45.0 37 TATCGGA 25 3.8912993E-5 45.0 36 GCGTATT 20 7.0338824E-4 45.0 22 GCGATCG 30 2.165887E-6 44.999996 9 CGGTCTA 115 0.0 44.999996 31 TCGATGG 120 0.0 43.124996 2 TATAGCG 150 0.0 42.000004 1 AATACGG 70 0.0 41.785717 2 ACGGGAT 425 0.0 41.294117 5 TACGGGA 290 0.0 40.34483 4 ACGGGTA 95 0.0 40.263157 5 ACGGGAC 285 0.0 40.263157 5 TCGCCTA 45 1.9288564E-8 40.0 33 AGGGTAC 390 0.0 39.807693 6 CTCACGA 130 0.0 39.80769 24 >>END_MODULE