##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545249_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3529419 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14345222258961 31.0 31.0 33.0 30.0 34.0 2 31.415153032269618 31.0 31.0 34.0 30.0 34.0 3 31.516366574781856 31.0 31.0 34.0 30.0 34.0 4 35.28929350694831 37.0 35.0 37.0 33.0 37.0 5 35.14179075932894 37.0 35.0 37.0 32.0 37.0 6 35.13147603047414 37.0 35.0 37.0 32.0 37.0 7 35.788108184378224 37.0 35.0 37.0 35.0 37.0 8 35.86220366581582 37.0 35.0 37.0 35.0 37.0 9 37.476192540471956 39.0 37.0 39.0 35.0 39.0 10 36.68740860747902 39.0 35.0 39.0 32.0 39.0 11 36.37498154795449 38.0 35.0 39.0 32.0 39.0 12 35.63747602650748 37.0 35.0 39.0 31.0 39.0 13 35.29487261217781 37.0 35.0 39.0 30.0 39.0 14 36.11920120563753 38.0 35.0 40.0 30.0 41.0 15 36.49534101788424 38.0 35.0 40.0 31.0 41.0 16 36.37075620661644 38.0 35.0 40.0 31.0 41.0 17 36.42102255357043 38.0 35.0 40.0 31.0 41.0 18 36.463870682398436 38.0 35.0 40.0 31.0 41.0 19 36.377576592634654 38.0 35.0 40.0 31.0 41.0 20 36.24661311110979 37.0 35.0 40.0 31.0 41.0 21 36.13141256393758 37.0 34.0 40.0 30.0 41.0 22 36.01459220341932 37.0 34.0 40.0 30.0 41.0 23 35.929794960586996 37.0 34.0 40.0 30.0 41.0 24 35.7230498844144 37.0 34.0 40.0 30.0 41.0 25 35.67300057034883 37.0 34.0 40.0 30.0 41.0 26 35.5313415607498 36.0 34.0 40.0 29.0 41.0 27 35.49548353425875 37.0 34.0 40.0 29.0 41.0 28 35.4979981124372 36.0 34.0 40.0 29.0 41.0 29 35.453007138002036 36.0 34.0 40.0 29.0 41.0 30 35.33214758576412 36.0 34.0 40.0 29.0 41.0 31 35.208162306600606 36.0 34.0 40.0 28.0 41.0 32 35.06885807550761 36.0 34.0 40.0 27.0 41.0 33 34.883616255253344 36.0 34.0 40.0 27.0 41.0 34 34.703332758167846 36.0 34.0 40.0 26.0 41.0 35 34.53170592666952 36.0 33.0 40.0 25.0 41.0 36 34.320339126638125 36.0 33.0 40.0 24.0 41.0 37 34.131281097540416 35.0 33.0 40.0 23.0 41.0 38 34.16546887745547 35.0 33.0 40.0 24.0 41.0 39 34.14456005365189 35.0 33.0 40.0 23.0 41.0 40 34.01612106695181 35.0 33.0 40.0 23.0 41.0 41 33.967335700295145 35.0 33.0 40.0 23.0 41.0 42 33.87329132641945 35.0 33.0 40.0 23.0 41.0 43 33.73179919981164 35.0 33.0 40.0 23.0 41.0 44 33.67118214074328 35.0 33.0 39.0 23.0 41.0 45 33.60683755598301 35.0 33.0 39.0 23.0 41.0 46 33.527547451861054 35.0 32.0 39.0 23.0 41.0 47 33.50371095072588 35.0 32.0 39.0 23.0 41.0 48 33.45971164092447 35.0 32.0 39.0 23.0 41.0 49 33.4300413184153 35.0 32.0 39.0 23.0 41.0 50 33.23715914715708 35.0 32.0 39.0 23.0 41.0 51 33.07638226008304 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 3.0 12 5.0 13 14.0 14 45.0 15 143.0 16 432.0 17 1207.0 18 2496.0 19 4666.0 20 8081.0 21 12659.0 22 18870.0 23 26301.0 24 36260.0 25 49431.0 26 64145.0 27 75323.0 28 84860.0 29 97409.0 30 114339.0 31 139027.0 32 170160.0 33 216589.0 34 342907.0 35 471164.0 36 273318.0 37 323500.0 38 424203.0 39 571433.0 40 426.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.957033721414206 23.770711270041897 27.332090635880864 14.940164372663038 2 32.12041415315098 26.018899994588345 28.684664529771048 13.176021322489623 3 29.571411045274026 25.41744122757882 31.556695308774618 13.454452418372542 4 26.922703141791892 27.57184681104737 30.589085625707803 14.916364421452935 5 22.76946998925319 32.23638224874972 29.84522381729117 15.148923944705913 6 21.277354714756168 41.352698560301285 27.193030920953277 10.176915803989269 7 85.36640166554325 4.967616483052876 7.711127525521906 1.954854325881965 8 86.27232980839055 4.378652690428651 7.514437928735579 1.8345795724452096 9 81.63386098391831 5.929729510721169 9.245742712894105 3.1906667924664087 10 48.24527776384725 23.780627916379437 15.332155235748434 12.641939084024878 11 40.987964308006504 22.050088130652664 22.2608026986878 14.701144862653031 12 37.49738979701758 21.0474018528262 26.919076482559877 14.536131867596339 13 21.803418636325127 36.41709867828104 25.836660368179576 15.942822317214251 14 16.242248370057506 37.53255139160298 28.953745644821428 17.271454593518083 15 15.638069608623969 23.834347806253664 43.537335748461715 16.990246836660653 16 17.520674082618132 19.646633057735567 41.941209020521505 20.891483839124795 17 17.283241236022132 20.170090317981515 29.922290325971503 32.62437812002486 18 20.56621783925343 23.437398619999495 35.113683016949814 20.88270052379726 19 29.487969549662424 24.19038374304666 26.210007936150397 20.11163877114052 20 30.430192618105135 23.33828882317458 26.97718803009787 19.254330528622415 21 22.51058885329285 28.7446177402003 28.43091171663098 20.313881689875867 22 22.86036313625557 24.46405484868756 24.72812097401867 27.947461041038203 23 20.336916642654217 29.909087019704945 26.355272638357757 23.39872369928308 24 19.40356188936479 24.203133716909214 39.15885305768457 17.234451336041428 25 18.754219887182565 26.141186410567858 34.92413340552652 20.18046029672306 26 17.521722413802383 33.12477209421721 27.21685920543863 22.13664628654178 27 17.8340117736092 33.280803441019614 28.54050482529844 20.34467996007275 28 16.804918883249623 28.691322849454824 35.73942340084869 18.76433486644686 29 17.045270057196383 25.257613221892893 34.929771727301286 22.767344993609427 30 19.241750554411365 31.878192983037717 30.36074776046709 18.51930870208383 31 28.357103534604423 28.081647432622763 25.266084871192678 18.295164161580136 32 29.615610954664213 25.1158901790918 26.533403939855255 18.735094926388733 33 27.94066105497817 26.77126178558001 24.135842188190182 21.152234971251644 34 19.6190081143667 27.011527959701016 27.515661926226386 25.8538019997059 35 21.228564814775464 25.150145108869193 30.997679788089766 22.623610288265574 36 29.40175139307631 27.870111199605375 23.973719187209 18.754418220109315 37 20.306231705558336 34.558974154102984 27.261200781205062 17.873593359133615 38 20.740665814968413 34.064501834437905 24.90166228492565 20.293170065668033 39 20.64101768591374 33.19305528757 25.624075803977934 20.541851222538327 40 24.934330551289037 25.806542096588704 26.997644654828456 22.261482697293804 41 18.48227711133192 24.710186010785346 28.199088858534505 28.608448019348227 42 19.74528952215648 26.245254530561546 25.15159010590695 28.857865841375023 43 20.017373964383374 25.928516846540468 27.430605433925525 26.623503755150637 44 18.702993325530347 28.60686135593422 30.229366363132286 22.46077895540314 45 18.182511059185664 36.554911729097626 24.084218960684463 21.178358251032254 46 21.150308308534633 34.16701162429284 24.8660756912115 19.81660437596103 47 20.35201827836253 28.965503954050227 27.04105123251164 23.641426535075603 48 20.603192763454835 26.313707723565834 32.3259153985401 20.75718411443923 49 21.04978184794721 27.021727938791056 31.834248073124783 20.094242140136945 50 19.682077985073466 33.449188095831076 27.245589146542248 19.623144772553218 51 18.02749971029226 32.70815961493946 26.784153425818815 22.480187248949473 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 11217.0 1 10592.0 2 9967.0 3 24660.0 4 39353.0 5 28256.0 6 17159.0 7 16775.0 8 16391.0 9 17511.5 10 18632.0 11 19636.5 12 20641.0 13 20190.0 14 19739.0 15 19755.0 16 19771.0 17 18371.5 18 16972.0 19 16581.0 20 16190.0 21 16253.5 22 16317.0 23 17816.5 24 19316.0 25 21794.0 26 28980.5 27 33689.0 28 41277.5 29 48866.0 30 56775.5 31 64685.0 32 74204.5 33 83724.0 34 96949.5 35 110175.0 36 114180.5 37 118186.0 38 135538.0 39 152890.0 40 195980.5 41 239071.0 42 277396.5 43 315722.0 44 320371.5 45 325021.0 46 305335.5 47 285650.0 48 261203.5 49 236757.0 50 217762.0 51 198767.0 52 183778.5 53 168790.0 54 154366.0 55 139942.0 56 138428.5 57 136915.0 58 132956.0 59 128997.0 60 121849.5 61 114702.0 62 104765.0 63 94828.0 64 84302.5 65 73777.0 66 62695.0 67 51613.0 68 46647.0 69 41681.0 70 37721.0 71 33761.0 72 30100.0 73 26439.0 74 22444.5 75 14161.0 76 9872.0 77 7727.5 78 5583.0 79 4198.5 80 2814.0 81 2034.0 82 1254.0 83 888.0 84 522.0 85 362.0 86 202.0 87 146.0 88 90.0 89 60.5 90 31.0 91 19.5 92 8.0 93 6.5 94 5.0 95 3.5 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3529419.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.58068758964544 #Duplication Level Percentage of deduplicated Percentage of total 1 78.95637423123158 13.88107348570414 2 7.021083423936196 2.4687094843412076 3 2.5727400725985743 1.3569161839715178 4 1.4618758535712035 1.0280313070592637 5 1.0229246591901286 0.8991859430483093 6 0.7034996655941219 0.7420804704138179 7 0.5621332311347237 0.6917882104236269 8 0.4460717833223855 0.6273798932117497 9 0.36748572132522916 0.5814586494246923 >10 4.25102900623267 17.87180602834377 >50 1.5293492030750495 19.032901067590853 >100 1.0800939978150126 36.09034191044548 >500 0.02017129781416276 2.2245263134992515 >1k 0.00466773833716163 1.3430333629693976 >5k 3.334098812258307E-4 0.49014489824986807 >10k+ 1.6670494061291535E-4 0.6706227913031261 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22882 0.6483220042732245 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 9920 0.2810660904811812 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 6804 0.19277960480181014 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02073995748308716 0.0 2 0.0 0.0 0.0 0.06372153603751779 0.0 3 0.0 0.0 0.0 0.09919479665066687 0.0 4 0.0 0.0 0.0 0.1399663797355882 0.0 5 0.0 0.0 0.0 0.247944491713792 0.0 6 0.0 0.0 0.0 0.3930675275449019 0.0 7 0.0 0.0 0.0 0.49084566043306277 0.0 8 0.0 0.0 0.0 0.7401501493588605 0.0 9 0.0 0.0 0.0 0.8491765925213187 0.0 10 0.0 0.0 0.0 1.0233695687590507 0.0 11 0.0 0.0 0.0 1.1701359345546676 0.0 12 2.8333275250119072E-5 0.0 0.0 1.2973806737029523 0.0 13 5.6666550500238143E-5 0.0 0.0 1.3541605573041908 0.0 14 5.6666550500238143E-5 0.0 0.0 1.3797455048550484 0.0 15 5.6666550500238143E-5 0.0 0.0 1.41346210240269 0.0 16 5.6666550500238143E-5 0.0 0.0 1.483615291921985 0.0 17 8.499982575035722E-5 0.0 0.0 1.5638834607055723 0.0 18 8.499982575035722E-5 0.0 0.0 1.6931398623966154 0.0 19 1.1333310100047629E-4 0.0 0.0 1.7477947503540952 0.0 20 1.1333310100047629E-4 0.0 0.0 1.81086462106086 0.0 21 1.1333310100047629E-4 0.0 0.0 1.8924077872307028 0.0 22 1.1333310100047629E-4 0.0 0.0 1.979305942422818 0.0 23 1.1333310100047629E-4 0.0 0.0 2.08442239360076 0.0 24 1.4166637625059536E-4 0.0 0.0 2.1670705575053573 0.0 25 1.6999965150071443E-4 0.0 0.0 2.2390087433654093 0.0 26 1.6999965150071443E-4 0.0 0.0 2.3093885990867054 0.0 27 1.6999965150071443E-4 0.0 0.0 2.379740121532751 0.0 28 1.6999965150071443E-4 0.0 0.0 2.458761626205333 0.0 29 1.6999965150071443E-4 0.0 0.0 2.551128103520721 0.0 30 1.6999965150071443E-4 0.0 0.0 2.66987286009397 0.0 31 1.6999965150071443E-4 0.0 0.0 2.768614324340635 0.0 32 1.6999965150071443E-4 0.0 0.0 2.865514125696042 0.0 33 1.983329267508335E-4 0.0 0.0 2.9647939221724595 0.0 34 1.983329267508335E-4 0.0 0.0 3.070108706277152 0.0 35 1.983329267508335E-4 0.0 0.0 3.2037000990814635 0.0 36 1.983329267508335E-4 0.0 0.0 3.3180815312661944 0.0 37 1.983329267508335E-4 0.0 0.0 3.427957972686156 0.0 38 2.549994772510716E-4 0.0 0.0 3.5531910492916823 0.0 39 3.1166602775130976E-4 0.0 0.0 3.7038957403470656 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATAG 130 0.0 41.538464 1 ACGTTAG 115 0.0 41.08696 1 CGGTCTA 210 0.0 40.714287 31 TTAACGG 450 0.0 40.0 2 ACATACG 2495 0.0 39.138275 17 CATACGA 2470 0.0 39.07895 18 TAGGGTA 1515 0.0 38.61386 5 TAGGGCG 1820 0.0 38.4478 5 TAAGTAG 410 0.0 38.414635 1 ACGGGCT 745 0.0 38.355705 5 CGTTTTT 15185 0.0 38.302605 1 TAATGCG 65 9.094947E-12 38.076927 1 CGAGGGA 1395 0.0 38.064514 4 AGGGCGA 3935 0.0 38.02414 6 TCTAGCG 125 0.0 37.8 1 GGACTAA 4645 0.0 37.782562 8 ATAGCGG 590 0.0 37.75424 2 GACCGAT 1490 0.0 37.75168 9 GGACCGA 1570 0.0 37.691086 8 CATATGC 2150 0.0 37.67442 33 >>END_MODULE